Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 3.1e-108 395.2 205 100.0
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 1.7e-42 176.8 216 51.9
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 3.2e-41 172.6 219 52.1
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 9.4e-41 171.0 207 51.7
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 9.4e-41 171.0 235 50.6
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 2.3e-39 166.4 236 44.1
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 3.0e-39 166.0 236 44.1
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 3.9e-39 165.6 206 52.4
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 5.2e-39 165.2 234 47.9
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 2.0e-38 163.3 231 45.0
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.6e-38 162.9 234 45.7
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 2.6e-38 162.9 234 45.7
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 7.4e-38 161.4 222 49.5
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 1.7e-37 160.2 228 46.9
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 1.7e-37 160.2 223 48.4
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.8e-37 159.5 232 46.1
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 4.8e-37 158.7 224 48.7
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 1.8e-36 156.8 222 46.4
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 2.4e-36 156.4 249 43.0
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 2.4e-36 156.4 230 44.3
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 9.1e-36 154.5 234 46.2
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 2.0e-35 153.3 229 46.3
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 2.0e-35 153.3 234 41.0
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 2.0e-35 153.3 222 48.6
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 4.5e-35 152.1 224 43.8
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 5.9e-35 151.8 222 45.9
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 1.7e-34 150.2 225 47.1
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 2.2e-34 149.8 194 49.5
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 2.2e-34 149.8 228 44.3
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 2.9e-34 149.4 210 44.3
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 3.8e-34 149.1 243 39.9
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 3.8e-34 149.1 241 44.8
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 8.5e-34 147.9 259 41.3
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 1.1e-33 147.5 227 46.7
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.5e-33 147.1 210 42.9
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 1.9e-33 146.7 266 40.2
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 1.9e-33 146.7 206 42.7
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 3.2e-33 146.0 230 45.2
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 4.2e-33 145.6 199 47.7
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 5.5e-33 145.2 221 41.6
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 5.5e-33 145.2 226 42.9
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 9.4e-33 144.4 221 41.2
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 1.6e-32 143.7 203 50.2
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 6.1e-32 141.7 204 44.1
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 6.1e-32 141.7 203 50.7
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 8.0e-32 141.4 254 41.3
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.0e-31 141.0 206 44.2
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 1.0e-31 141.0 244 38.1
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.4e-31 140.6 209 44.5
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 3.0e-31 139.4 229 41.5
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 4.0e-31 139.0 236 40.7
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 5.2e-31 138.7 255 39.6
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 6.7e-31 138.3 231 41.1
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 6.7e-31 138.3 222 47.3
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 8.8e-31 137.9 240 41.7
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 8.8e-31 137.9 238 43.3
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 1.2e-30 137.5 210 44.8
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 1.2e-30 137.5 199 45.7
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 1.5e-30 137.1 205 43.9
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.5e-30 137.1 238 40.3
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 1.5e-30 137.1 235 42.1
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 2.6e-30 136.3 204 43.6
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 2.6e-30 136.3 235 44.3
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 2.6e-30 136.3 203 49.3
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 3.3e-30 136.0 207 43.0
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 4.4e-30 135.6 236 41.9
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.7e-30 135.2 216 46.8
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 5.7e-30 135.2 220 43.2
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 1.7e-29 133.7 226 42.5
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 2.2e-29 133.3 245 42.0
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 2.2e-29 133.3 209 43.1
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 2.2e-29 133.3 83 74.7
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 2.8e-29 132.9 230 43.0
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 3.7e-29 132.5 210 41.9
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 3.7e-29 132.5 210 41.9
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 3.7e-29 132.5 207 44.9
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 3.7e-29 132.5 155 48.4
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 4.8e-29 132.1 212 42.9
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 4.8e-29 132.1 209 43.1
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 6.3e-29 131.7 135 49.6
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 1.1e-28 131.0 210 41.9
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.1e-28 131.0 198 46.5
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 1.1e-28 131.0 208 41.3
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 1.1e-28 131.0 197 40.6
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 1.1e-28 131.0 242 40.5
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 1.8e-28 130.2 133 54.1
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 3.1e-28 129.4 214 42.1
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 3.1e-28 129.4 230 40.4
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 4.1e-28 129.0 204 42.6
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 9.1e-28 127.9 232 40.1
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 1.2e-27 127.5 208 41.3
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.2e-27 127.5 79 72.2
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 1.6e-27 127.1 275 36.4
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 2.0e-27 126.7 222 40.5
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 4.5e-27 125.6 201 44.3
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 4.5e-27 125.6 231 38.5
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 7.7e-27 124.8 204 41.7
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 1.0e-26 124.4 193 42.5
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 1.0e-26 124.4 233 41.6
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 1.7e-26 123.6 90 61.1
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 2.9e-26 122.9 210 41.0
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 2.9e-26 122.9 231 38.5
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 6.5e-26 121.7 234 38.9
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 6.5e-26 121.7 173 43.4
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 8.5e-26 121.3 205 42.9
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 8.5e-26 121.3 205 42.9
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 1.5e-25 120.6 222 38.7
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 2.5e-25 119.8 256 36.7
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 2.5e-25 119.8 201 43.8
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 3.2e-25 119.4 256 36.3
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 4.2e-25 119.0 80 70.0
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.2e-24 117.5 199 43.2
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 1.6e-24 117.1 209 40.2
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 2.7e-24 116.3 86 66.3
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 3.6e-24 115.9 264 35.2
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 1.8e-23 113.6 193 37.8
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.3e-23 113.2 233 36.9
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 2.3e-23 113.2 86 65.1
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 8.8e-23 111.3 199 38.7
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 8.8e-23 111.3 199 38.7
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 1.2e-22 110.9 235 37.9
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 3.4e-22 109.4 209 37.8
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 3.4e-22 109.4 237 38.8
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 9.8e-22 107.8 211 37.0
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 9.8e-22 107.8 211 37.0
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 3.7e-21 105.9 104 51.0
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 4.8e-21 105.5 202 35.6
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 8.3e-21 104.8 129 43.4
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 1.4e-20 104.0 168 40.5
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 2.0e-19 100.1 143 40.6
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 2.7e-19 99.8 195 36.4
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 5.9e-19 98.6 197 37.1
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 1.1e-17 94.4 108 46.3
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 9.5e-17 91.3 81 56.8
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 1.6e-16 90.5 222 32.0
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 2.8e-16 89.7 105 43.8
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 2.8e-16 89.7 199 37.2
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 2.8e-16 89.7 213 36.6
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 1.2e-14 84.3 189 38.6
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 2.4e-12 76.6 201 32.8
Cpa.g.sc34.169 Carica papaya HOM05D004801 ORTHO05D005747 1.2e-11 74.3 154 35.1
SalBow7G4186 Salvia bowleyana HOM05D000074 ORTHO05D000220 5.0e-10 68.9 152 35.5
SalBow1G0370 Salvia bowleyana HOM05D004801 ORTHO05D005747 3.3e-09 66.2 148 33.8
AT1G52270 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 3.6e-08 62.8 142 32.4


User provided reference genes

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