Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 1.3e-39 166.0 87 100.0
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 6.2e-10 67.4 87 47.1
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 8.1e-10 67.0 87 50.6
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 5.3e-09 64.3 87 52.9
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.5e-08 62.8 90 51.1
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 4.4e-08 61.2 98 51.0
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 5.8e-08 60.8 88 46.6
DCAR_009746 Daucus carota HOM05D005953 ORTHO05D004056 7.6e-08 60.5 90 45.6
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 7.6e-08 60.5 90 46.7
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 7.6e-08 60.5 90 46.7
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 9.9e-08 60.1 95 47.4
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.7e-07 59.3 82 43.9
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.2e-07 58.9 91 46.2
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 2.9e-07 58.5 92 44.6
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 2.9e-07 58.5 90 45.6
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.9e-07 58.5 89 46.1
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 3.8e-07 58.2 87 42.5
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 4.9e-07 57.8 87 42.5
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 4.9e-07 57.8 90 50.0
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 6.4e-07 57.4 87 46.0
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 6.4e-07 57.4 87 44.8
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 8.4e-07 57.0 39 69.2
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 1.1e-06 56.6 90 43.3
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 1.1e-06 56.6 90 46.7
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 2.4e-06 55.5 90 42.2
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 2.4e-06 55.5 91 46.2
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 2.4e-06 55.5 93 45.2
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 3.2e-06 55.1 88 45.5
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 3.2e-06 55.1 97 43.3
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 5.4e-06 54.3 91 41.8
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.4e-06 54.3 97 49.5
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 5.4e-06 54.3 90 44.4
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 7.1e-06 53.9 91 39.6
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 7.1e-06 53.9 101 42.6
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 7.1e-06 53.9 87 46.0
CSS0009794 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 9.3e-06 53.5 44 61.4
CSS0043976 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 9.3e-06 53.5 44 61.4
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 9.3e-06 53.5 87 48.3
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 9.3e-06 53.5 87 46.0
Sopen10g004210 Solanum pennellii HOM05D005953 ORTHO05D004056 9.3e-06 53.5 32 81.2
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 9.3e-06 53.5 88 47.7
PGSC0003DMG400021686 Solanum tuberosum HOM05D005953 ORTHO05D004056 9.3e-06 53.5 27 92.6


User provided reference genes

Program Settings