Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012923 Daucus carota HOM05D004421 ORTHO05D005227 6.7e-57 223.8 113 100.0
DCAR_019262 Daucus carota HOM05D004421 ORTHO05D005227 2.9e-52 208.4 113 92.9
CSS0029217 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 1.8e-49 199.1 108 89.8
CSS0000360 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 2.3e-49 198.7 108 89.8
QL10p065608 Quercus lobata HOM05D004421 ORTHO05D005227 5.2e-49 197.6 107 88.8
QL08p031014 Quercus lobata HOM05D004421 ORTHO05D005227 8.8e-49 196.8 107 88.8
Hma1.2p1_0445F.1_g154450 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.5e-48 196.1 111 85.6
vmacro09354 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 1.5e-48 196.1 108 88.0
QL10p065434 Quercus lobata HOM05D004421 ORTHO05D005227 2.0e-48 195.7 107 87.9
Cfa014325 Carpinus fangiana HOM05D004421 ORTHO05D005227 3.3e-48 194.9 107 86.0
Rhsim04G0051300 Rhododendron simsii HOM05D004421 ORTHO05D005227 7.5e-48 193.7 107 88.8
FAN02G1632 Fragaria x ananassa HOM05D004421 ORTHO05D005227 9.7e-48 193.4 107 86.9
FvH4_6g42460 Fragaria vesca HOM05D004421 ORTHO05D005227 1.3e-47 193.0 107 86.9
FAN05G5559 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.3e-47 193.0 107 86.9
FAN09G1846 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.3e-47 193.0 107 86.9
FAN14G1774 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.3e-47 193.0 107 86.9
RcHm_v2.0_Chr2g0158361 Rosa chinensis HOM05D004421 ORTHO05D005227 1.3e-47 193.0 107 86.9
Haze_12777 Corylus avellana HOM05D004421 ORTHO05D005227 1.7e-47 192.6 107 85.0
Lsat_1_v5_gn_7_92700 Lactuca sativa HOM05D004421 ORTHO05D005227 4.8e-47 191.0 110 83.6
PGR042G0750 Punica granatum HOM05D004421 ORTHO05D005227 4.8e-47 191.0 107 86.0
TAR629G1061 Trochodendron aralioides HOM05D004421 ORTHO05D005227 4.8e-47 191.0 107 86.0
CiPaw.03G156500 Carya illinoinensis HOM05D004421 ORTHO05D005227 8.2e-47 190.3 103 88.3
CiPaw.08G089000 Carya illinoinensis HOM05D004421 ORTHO05D005227 8.2e-47 190.3 103 89.3
Prupe.3G211700 Prunus persica HOM05D004421 ORTHO05D005227 8.2e-47 190.3 107 87.9
LjContig00564g0020145 Lotus japonicus HOM05D004421 ORTHO05D005227 1.1e-46 189.9 106 87.7
LjContig00564g0024160 Lotus japonicus HOM05D004421 ORTHO05D005227 1.1e-46 189.9 106 87.7
LjContig00564g0000485 Lotus japonicus HOM05D004421 ORTHO05D005227 3.1e-46 188.3 106 86.8
LjContig00564g0024311 Lotus japonicus HOM05D004421 ORTHO05D005227 3.1e-46 188.3 106 86.8
Potri.002G225600 Populus trichocarpa HOM05D004421 ORTHO05D005227 3.1e-46 188.3 106 86.8
arahy.Tifrunner.gnm1.ann1.J4LN0V Arachis hypogaea HOM05D004421 ORTHO05D005227 5.3e-46 187.6 108 83.3
arahy.Tifrunner.gnm1.ann1.BKRM87 Arachis hypogaea HOM05D004421 ORTHO05D005227 7.0e-46 187.2 108 83.3
Cpa.g.sc12.255 Carica papaya HOM05D004421 ORTHO05D005227 7.0e-46 187.2 110 84.5
Hma1.2p1_0177F.1_g077900 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.2e-45 186.4 107 86.0
Hma1.2p1_0177F.1_g077905 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 1.2e-45 186.4 107 86.0
Glyma.14G047100 Glycine max HOM05D004421 ORTHO05D005227 2.0e-45 185.7 104 86.5
Manes.13G067100 Manihot esculenta HOM05D004421 ORTHO05D005227 2.7e-45 185.3 107 85.0
Rhsim06G0166700 Rhododendron simsii HOM05D004421 ORTHO05D005227 2.7e-45 185.3 108 83.3
Glyma.02G269800 Glycine max HOM05D004421 ORTHO05D005227 3.5e-45 184.9 104 85.6
Sabra02G0172700 Salix brachista HOM05D004421 ORTHO05D005227 3.5e-45 184.9 106 84.9
VMungo0647G1664 Vigna mungo HOM05D004421 ORTHO05D005227 3.5e-45 184.9 102 88.2
GSVIVG01036899001 Vitis vinifera HOM05D004421 ORTHO05D005227 3.5e-45 184.9 108 84.3
Eucgr.B01010 Eucalyptus grandis HOM05D004421 ORTHO05D005227 4.5e-45 184.5 100 88.0
HanXRQChr04g0126911 Helianthus annuus HOM05D004421 ORTHO05D005227 4.5e-45 184.5 110 82.7
Ciclev10009985m.g Citrus clementina HOM05D004421 ORTHO05D005227 1.0e-44 183.3 107 83.2
Nitab4.5_0005588g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.0e-44 183.3 108 81.5
Phvul.008G212200 Phaseolus vulgaris HOM05D004421 ORTHO05D005227 1.0e-44 183.3 102 86.3
Ca_23316_v3 Cicer arietinum L. HOM05D004421 ORTHO05D005227 2.2e-44 182.2 103 84.5
Lalb_Chr10g0105671 Lupinus albus HOM05D004421 ORTHO05D005227 2.2e-44 182.2 104 85.6
Aqoxy6G00590 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 2.9e-44 181.8 109 78.0
Potri.014G157400 Populus trichocarpa HOM05D004421 ORTHO05D005227 2.9e-44 181.8 107 83.2
ClCG02G009100 Citrullus lanatus HOM05D004421 ORTHO05D005227 3.8e-44 181.4 104 84.6
Nitab4.5_0000138g0020 Nicotiana tabacum HOM05D004421 ORTHO05D005227 5.0e-44 181.0 108 80.6
Thecc.07G030200 Theobroma cacao HOM05D004421 ORTHO05D005227 5.0e-44 181.0 108 79.6
Sc12g0002130 Simmondsia chinensis HOM05D004421 ORTHO05D005227 6.5e-44 180.6 107 86.0
CsaV3_2G034620 Cucumis sativus L. HOM05D004421 ORTHO05D005227 8.5e-44 180.3 107 81.3
ECA236G3405 Erigeron canadensis HOM05D004421 ORTHO05D005227 8.5e-44 180.3 112 83.0
ECA234G2260 Erigeron canadensis HOM05D004421 ORTHO05D005227 1.1e-43 179.9 112 78.6
Nitab4.5_0007533g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.5e-43 179.5 108 81.5
Psat4g220560 Pisum sativum HOM05D004421 ORTHO05D005227 1.5e-43 179.5 106 81.1
Aqoxy7G01112 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 2.5e-43 178.7 100 86.0
Oeu013122.1 Olea europaea HOM05D004421 ORTHO05D005227 2.5e-43 178.7 107 81.3
Sed0012667 Sechium edule HOM05D004421 ORTHO05D005227 3.2e-43 178.3 106 82.1
CANSAT64G1364 Cannabis sativa HOM05D004421 ORTHO05D005227 4.2e-43 177.9 104 83.7
TPR.G1800 Trifolium pratense HOM05D004421 ORTHO05D005227 4.2e-43 177.9 103 83.5
TWI36G1565 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 5.5e-43 177.6 107 80.4
Medtr8g099150 Medicago truncatula HOM05D004421 ORTHO05D005227 9.4e-43 176.8 104 80.8
Nitab4.5_0001288g0200 Nicotiana tabacum HOM05D004421 ORTHO05D005227 9.4e-43 176.8 108 80.6
TPR.G7933 Trifolium pratense HOM05D004421 ORTHO05D005227 1.6e-42 176.0 103 81.6
CAN.G149.31 Capsicum annuum HOM05D004421 ORTHO05D005227 2.1e-42 175.6 108 78.7
Gorai.005G241500 Gossypium raimondii HOM05D004421 ORTHO05D005227 2.7e-42 175.3 108 76.9
unitig_748.g8294 Utricularia gibba HOM05D004421 ORTHO05D005227 2.7e-42 175.3 98 87.8
Medtr8g016300 Medicago truncatula HOM05D004421 ORTHO05D005227 3.6e-42 174.9 104 79.8
TWI79G1637 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 4.7e-42 174.5 107 79.4
CAN.G358.76 Capsicum annuum HOM05D004421 ORTHO05D005227 6.1e-42 174.1 108 77.8
MSTRG.12990 Avicennia marina HOM05D004421 ORTHO05D005227 1.0e-41 173.3 98 85.7
MSTRG.14457 Avicennia marina HOM05D004421 ORTHO05D005227 1.0e-41 173.3 107 80.4
Peaxi162Scf00047g00850 Petunia axillaris HOM05D004421 ORTHO05D005227 1.0e-41 173.3 108 78.7
unitig_32.g10858 Utricularia gibba HOM05D004421 ORTHO05D005227 1.0e-41 173.3 98 87.8
Duzib128G1691 Durio zibethinus HOM05D004421 ORTHO05D005227 1.8e-41 172.6 109 76.1
Gohir.A03G192600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 1.8e-41 172.6 108 75.9
Peaxi162Scf00149g00049 Petunia axillaris HOM05D004421 ORTHO05D005227 1.8e-41 172.6 108 77.8
SalBow3G0779 Salvia bowleyana HOM05D004421 ORTHO05D005227 2.3e-41 172.2 107 77.6
Oeu054302.1 Olea europaea HOM05D004421 ORTHO05D005227 4.0e-41 171.4 107 78.5
SHI33915 Sapria himalayana HOM05D004421 ORTHO05D005227 6.8e-41 170.6 109 78.0
PGSC0003DMG400010437 Solanum tuberosum HOM05D004421 ORTHO05D005227 6.8e-41 170.6 108 76.9
CDE04G3645 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 8.8e-41 170.2 104 76.9
MELO3C019309.2 Cucumis melo HOM05D004421 ORTHO05D005227 8.8e-41 170.2 99 82.8
Lsat_1_v5_gn_5_123820 Lactuca sativa HOM05D004421 ORTHO05D005227 8.8e-41 170.2 99 82.8
ATR0665G259 Amborella trichopoda HOM05D004421 ORTHO05D005227 1.5e-40 169.5 98 84.7
CDE06G2669 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 1.5e-40 169.5 104 76.9
Gohir.D02G213600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 1.5e-40 169.5 108 75.0
CAN.G358.77 Capsicum annuum HOM05D004421 ORTHO05D005227 2.0e-40 169.1 108 75.9
Sopen02g017940 Solanum pennellii HOM05D004421 ORTHO05D005227 2.0e-40 169.1 98 81.6
PSO017G4413 Papaver somniferum HOM05D004421 ORTHO05D005227 4.4e-40 167.9 108 77.8
PSO675G5827 Papaver somniferum HOM05D004421 ORTHO05D005227 4.4e-40 167.9 108 77.8
Solyc02g068770.4 Solanum lycopersicum HOM05D004421 ORTHO05D005227 4.4e-40 167.9 98 80.6
AUR62030497 Chenopodium quinoa HOM05D004421 ORTHO05D005227 9.8e-40 166.8 100 79.0
MBI16_g23852_MAGBIO Magnolia biondii HOM05D004421 ORTHO05D005227 9.8e-40 166.8 110 73.6
EL10Ac5g12553 Beta vulgaris HOM05D004421 ORTHO05D005227 1.3e-39 166.4 107 75.7
AUR62030797 Chenopodium quinoa HOM05D004421 ORTHO05D005227 2.2e-39 165.6 100 78.0
SGA_v2.0_scaffold392G50685 Striga asiatica HOM05D004421 ORTHO05D005227 4.8e-39 164.5 107 76.6
Eucgr.B01013 Eucalyptus grandis HOM05D004421 ORTHO05D005227 1.8e-38 162.5 95 85.3
Cc05_g14180 Coffea canephora HOM05D004421 ORTHO05D005227 2.4e-38 162.2 110 72.7
Atru.chr2.3508 Acer truncatum HOM05D004421 ORTHO05D005227 4.1e-38 161.4 107 70.1
Cc05_g02530 Coffea canephora HOM05D004421 ORTHO05D005227 4.5e-37 157.9 108 71.3
Ah.12g058680 Amaranthus hybridus HOM05D004421 ORTHO05D005227 5.9e-37 157.5 107 73.8
SGA_v2.0_scaffold159G37698 Striga asiatica HOM05D004421 ORTHO05D005227 5.9e-37 157.5 98 77.6
SGA_v2.0_scaffold363G49953 Striga asiatica HOM05D004421 ORTHO05D005227 7.7e-37 157.1 107 74.8
Hund24697 Selenicereus undatus HOM05D004421 ORTHO05D005227 1.7e-36 156.0 100 78.0
COL.COLO4_09709 Corchorus olitorius HOM05D004421 ORTHO05D005227 2.2e-36 155.6 108 69.4
THA.LOC104811627 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 2.9e-36 155.2 110 69.1
CSS0048822 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 8.5e-36 153.7 108 75.0
THA.LOC104813431 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 4.2e-35 151.4 98 74.5
BolC2t07739H Brassica oleracea HOM05D004421 ORTHO05D005227 2.1e-34 149.1 110 66.4
C02p16370 Brassica napus HOM05D004421 ORTHO05D005227 6.1e-34 147.5 110 65.5
BcaC04g20265 Brassica carinata HOM05D004421 ORTHO05D005227 1.8e-33 146.0 110 64.5
BraA10t43337Z Brassica rapa HOM05D004421 ORTHO05D005227 1.8e-33 146.0 110 64.5
BcaB05g22185 Brassica carinata HOM05D004421 ORTHO05D005227 3.0e-33 145.2 110 64.5
Aa31LG3G11160 Aethionema arabicum HOM05D004421 ORTHO05D005227 4.0e-33 144.8 110 62.7
BraA02t06048Z Brassica rapa HOM05D004421 ORTHO05D005227 5.2e-33 144.4 107 64.5
BcaB08g35879 Brassica carinata HOM05D004421 ORTHO05D005227 6.8e-33 144.1 105 65.7
Thhalv10015072m.g Eutrema salsugineum HOM05D004421 ORTHO05D005227 1.2e-32 143.3 107 65.4
HPP92_026149 Vanilla planifolia HOM05D004421 ORTHO05D005227 1.2e-32 143.3 102 64.7
A02p09830 Brassica napus HOM05D004421 ORTHO05D005227 1.5e-32 142.9 107 63.6
BolC9t57441H Brassica oleracea HOM05D004421 ORTHO05D005227 2.6e-32 142.1 112 63.4
Sp6g17090 Schrenkiella parvula HOM05D004421 ORTHO05D005227 3.4e-32 141.7 110 62.7
A05p12050 Brassica napus HOM05D004421 ORTHO05D005227 4.4e-32 141.4 111 64.0
A10p12420 Brassica napus HOM05D004421 ORTHO05D005227 4.4e-32 141.4 111 64.0
C09p45840 Brassica napus HOM05D004421 ORTHO05D005227 4.4e-32 141.4 111 64.0
TPR.G40166 Trifolium pratense HOM05D004421 ORTHO05D005227 1.3e-31 139.8 87 79.3
Zm00001eb211500 Zea mays HOM05D004421 ORTHO05D005227 1.7e-31 139.4 99 68.7
Carub.0008s1546 Capsella rubella HOM05D004421 ORTHO05D005227 2.8e-31 138.7 98 64.3
vmacro12170 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 4.9e-31 137.9 93 77.4
AT5G55140 Arabidopsis thaliana HOM05D004421 ORTHO05D005227 8.3e-31 137.1 98 64.3
AL8G30670 Arabidopsis lyrata HOM05D004421 ORTHO05D005227 1.1e-30 136.7 98 63.3
Lj2g0010759 Lotus japonicus HOM05D004421 ORTHO05D005227 1.4e-30 136.3 107 67.3
CARHR268500 Cardamine hirsuta HOM05D004421 ORTHO05D005227 1.8e-30 136.0 110 61.8
Os08g0110100 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 3.1e-30 135.2 103 65.0
Dinv22240 Davidia involucrata HOM05D004421 ORTHO05D005227 1.0e-28 130.2 66 92.4
SEGI_06591 Sequoiadendron giganteum HOM05D004421 ORTHO05D005227 9.5e-27 123.6 98 58.2
BcaC03g14260 Brassica carinata HOM05D004421 ORTHO05D005227 3.6e-26 121.7 81 70.4
Eucgr.B01894 Eucalyptus grandis HOM05D004421 ORTHO05D005227 1.8e-25 119.4 65 87.7
FvH4_6g04610 Fragaria vesca HOM05D004421 ORTHO05D005227 1.5e-24 116.3 75 80.0
Hma1.2p1_2381F.1_g321010 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 2.6e-24 115.5 95 62.1
BraA03t14310Z Brassica rapa HOM05D004421 ORTHO05D005227 4.4e-24 114.8 90 62.2
Mapoly0058s0042 Marchantia polymorpha HOM05D004421 ORTHO05D005227 7.5e-24 114.0 93 63.4
A08p21130 Brassica napus HOM05D004421 ORTHO05D005227 9.8e-24 113.6 90 62.2
BcaC03g14258 Brassica carinata HOM05D004421 ORTHO05D005227 2.2e-23 112.5 94 61.7
Os06g0339800 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 7.0e-22 107.5 97 57.7
AagrBONN_evm.TU.Sc2ySwM_344.5034 Anthoceros agrestis HOM05D004421 ORTHO05D005227 1.0e-20 103.6 87 57.5
Migut.H01800 Erythranthe guttata HOM05D004421 ORTHO05D005227 1.1e-19 100.1 56 82.1
Pp3c26_2200 Physcomitrium patens HOM05D004421 ORTHO05D005227 2.1e-18 95.9 89 55.1
Potri.010G076275 Populus trichocarpa HOM05D004421 ORTHO05D005227 2.8e-18 95.5 79 64.6
MD09G1112900 Malus domestica HOM05D004421 ORTHO05D005227 8.0e-18 94.0 57 82.5
HanXRQChr16g0506671 Helianthus annuus HOM05D004421 ORTHO05D005227 4.0e-17 91.7 60 76.7
Manes.12G070801 Manihot esculenta HOM05D004421 ORTHO05D005227 1.5e-16 89.7 56 78.6
RcHm_v2.0_Chr4g0419171 Rosa chinensis HOM05D004421 ORTHO05D005227 2.0e-16 89.4 107 47.7
GSVIVG01030492001 Vitis vinifera HOM05D004421 ORTHO05D005227 2.9e-15 85.5 58 74.1
Nn2g15167 Nelumbo nucifera HOM05D004421 ORTHO05D005227 1.1e-11 73.6 45 82.2
SMO172G0081 Selaginella moellendorffii HOM05D004421 ORTHO05D005227 1.5e-11 73.2 98 42.9
Cre05.g234659 Chlamydomonas reinhardtii HOM05D004421 ORTHO05D005227 7.5e-08 60.8 83 42.2


User provided reference genes

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