Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012843 Daucus carota HOM05D001009 ORTHO05D175352 1.2e-192 676.4 368 100.0
DCAR_023549 Daucus carota HOM05D001009 ORTHO05D000829 1.5e-49 201.1 388 42.5
DCAR_011513 Daucus carota HOM05D001009 ORTHO05D000829 9.3e-15 85.5 146 34.2
PGR142G2699 Punica granatum HOM05D001009 ORTHO05D000829 2.1e-14 84.3 167 34.1
Carub.0004s2189 Capsella rubella HOM05D001009 ORTHO05D000829 7.9e-14 82.4 189 30.2
AL4G37330 Arabidopsis lyrata HOM05D001009 ORTHO05D000829 1.8e-13 81.3 189 29.1
AL772U10020 Arabidopsis lyrata HOM05D001009 ORTHO05D000829 2.3e-13 80.9 189 29.1
BcaB02g09088 Brassica carinata HOM05D001009 ORTHO05D000829 3.0e-13 80.5 189 29.6
Lj8A78T47 Lonicera japonica HOM05D001009 ORTHO05D000829 3.0e-13 80.5 172 32.0
MSTRG.8284 Avicennia marina HOM05D001009 ORTHO05D000829 3.9e-13 80.1 185 32.4
A05p06610 Brassica napus HOM05D001009 ORTHO05D000829 3.9e-13 80.1 189 29.6
Eucgr.G02989 Eucalyptus grandis HOM05D001009 ORTHO05D000829 3.9e-13 80.1 164 32.3
arahy.Tifrunner.gnm1.ann1.FFR9P9 Arachis hypogaea HOM05D001009 ORTHO05D000829 6.7e-13 79.3 194 29.9
Cpa.g.sc454.2 Carica papaya HOM05D001009 ORTHO05D000829 8.7e-13 79.0 164 30.5
arahy.Tifrunner.gnm1.ann1.B3W4AW Arachis hypogaea HOM05D001009 ORTHO05D000829 1.1e-12 78.6 167 31.1
Ciclev10032528m.g Citrus clementina HOM05D001009 ORTHO05D000829 1.1e-12 78.6 164 30.5
Medtr5g080880 Medicago truncatula HOM05D001009 ORTHO05D000829 1.1e-12 78.6 190 30.0
C04p07720 Brassica napus HOM05D001009 ORTHO05D000829 1.5e-12 78.2 189 30.2
BolC4t22388H Brassica oleracea HOM05D001009 ORTHO05D000829 1.5e-12 78.2 189 30.2
Psat2g038720 Pisum sativum HOM05D001009 ORTHO05D000829 1.5e-12 78.2 195 30.8
Sp4g22070 Schrenkiella parvula HOM05D001009 ORTHO05D000829 1.5e-12 78.2 189 28.6
Nitab4.5_0004474g0020 Nicotiana tabacum HOM05D001009 ORTHO05D000829 1.9e-12 77.8 164 32.3
BraA05t19628Z Brassica rapa HOM05D001009 ORTHO05D000829 2.5e-12 77.4 189 30.2
Thhalv10017139m.g Eutrema salsugineum HOM05D001009 ORTHO05D000829 2.5e-12 77.4 189 31.2
CsaV3_6G001390 Cucumis sativus L. HOM05D001009 ORTHO05D000829 3.3e-12 77.0 167 31.1
arahy.Tifrunner.gnm1.ann1.4F3MJE Arachis hypogaea HOM05D001009 ORTHO05D000829 4.3e-12 76.6 167 31.7
QL08p061631 Quercus lobata HOM05D001009 ORTHO05D000829 4.3e-12 76.6 162 30.2
arahy.Tifrunner.gnm1.ann1.U1AIJ2 Arachis hypogaea HOM05D001009 ORTHO05D000829 5.6e-12 76.3 167 30.5
BcaC02g12112 Brassica carinata HOM05D001009 ORTHO05D000829 5.6e-12 76.3 189 29.6
QL08p061640 Quercus lobata HOM05D001009 ORTHO05D000829 5.6e-12 76.3 184 28.3
CSS0002250 Camellia sinensis var. sinensis HOM05D001009 ORTHO05D000829 7.4e-12 75.9 164 31.1
Peaxi162Scf00611g00321 Petunia axillaris HOM05D001009 ORTHO05D000829 7.4e-12 75.9 164 31.7
CANSAT56G1474 Cannabis sativa HOM05D001009 ORTHO05D000829 9.6e-12 75.5 164 30.5
Cc02_g07350 Coffea canephora HOM05D001009 ORTHO05D000829 9.6e-12 75.5 193 29.0
AT2G39795 Arabidopsis thaliana HOM05D001009 ORTHO05D000829 1.6e-11 74.7 217 28.1
MELO3C008244.2 Cucumis melo HOM05D001009 ORTHO05D000829 1.6e-11 74.7 166 31.9
CiPaw.01G292100 Carya illinoinensis HOM05D001009 ORTHO05D000829 2.8e-11 73.9 162 30.9
HPP92_015487 Vanilla planifolia HOM05D001009 ORTHO05D000829 2.8e-11 73.9 200 28.5
Lalb_Chr17g0346401 Lupinus albus HOM05D001009 ORTHO05D000829 3.7e-11 73.6 169 30.8
ClCG11G006610 Citrullus lanatus HOM05D001009 ORTHO05D000829 4.8e-11 73.2 165 30.3
COL.COLO4_25520 Corchorus olitorius HOM05D001009 ORTHO05D000829 4.8e-11 73.2 165 30.9
DCAR_027590 Daucus carota HOM05D001009 ORTHO05D000829 6.2e-11 72.8 164 30.5
Gohir.D04G064900 Gossypium hirsutum HOM05D001009 ORTHO05D000829 8.2e-11 72.4 191 29.3
Gorai.012G073000 Gossypium raimondii HOM05D001009 ORTHO05D000829 8.2e-11 72.4 191 29.3
Phvul.008G230400 Phaseolus vulgaris HOM05D001009 ORTHO05D000829 8.2e-11 72.4 163 29.4
Sc11g0007650 Simmondsia chinensis HOM05D001009 ORTHO05D000829 8.2e-11 72.4 170 31.2
VMungo0647G0043 Vigna mungo HOM05D001009 ORTHO05D000829 8.2e-11 72.4 192 28.1
AUR62012145 Chenopodium quinoa HOM05D001009 ORTHO05D000829 1.1e-10 72.0 166 31.3
MBI05_g02642_MAGBIO Magnolia biondii HOM05D001009 ORTHO05D000829 1.1e-10 72.0 189 31.2
Medtr7g063520 Medicago truncatula HOM05D001009 ORTHO05D000829 1.1e-10 72.0 191 31.4
Nitab4.5_0000779g0060 Nicotiana tabacum HOM05D001009 ORTHO05D000829 1.1e-10 72.0 164 31.1
Thecc.10G034700 Theobroma cacao HOM05D001009 ORTHO05D000829 1.1e-10 72.0 163 31.9
Duzib114G0353 Durio zibethinus HOM05D001009 ORTHO05D000829 1.4e-10 71.6 165 32.1
CSS0049537 Camellia sinensis var. sinensis HOM05D001009 ORTHO05D000829 1.8e-10 71.2 164 31.7
TPR.G25850 Trifolium pratense HOM05D001009 ORTHO05D000829 1.8e-10 71.2 192 27.6
TWI63G0148 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 1.8e-10 71.2 167 30.5
GSVIVG01016468001 Vitis vinifera HOM05D001009 ORTHO05D000829 1.8e-10 71.2 165 32.1
EL10Ac2g04692 Beta vulgaris HOM05D001009 ORTHO05D000829 2.4e-10 70.9 166 30.7
LjContig00141g0011947 Lotus japonicus HOM05D001009 ORTHO05D000829 2.4e-10 70.9 194 28.9
Oeu059732.1 Olea europaea HOM05D001009 ORTHO05D000829 2.4e-10 70.9 164 30.5
SalBow6G5081 Salvia bowleyana HOM05D001009 ORTHO05D000829 2.4e-10 70.9 200 29.0
MSTRG.263 Avicennia marina HOM05D001009 ORTHO05D000829 3.1e-10 70.5 195 29.2
SalBow6G2327 Salvia bowleyana HOM05D001009 ORTHO05D000829 3.1e-10 70.5 200 29.0
THA.LOC104810052 Tarenaya hassleriana HOM05D001009 ORTHO05D000829 3.1e-10 70.5 167 28.7
Ah.16g102680 Amaranthus hybridus HOM05D002357 ORTHO05D002676 4.0e-10 70.1 170 31.2
CARHR134670 Cardamine hirsuta HOM05D001009 ORTHO05D000829 4.0e-10 70.1 190 27.4
Sabra10G0152900 Salix brachista HOM05D001009 ORTHO05D000829 4.0e-10 70.1 164 30.5
DCAR_011745 Daucus carota HOM05D001009 ORTHO05D000829 5.3e-10 69.7 164 28.7
Dinv34469 Davidia involucrata HOM05D001009 ORTHO05D000829 5.3e-10 69.7 197 29.9
Gohir.A10G223300 Gossypium hirsutum HOM05D001009 ORTHO05D000829 5.3e-10 69.7 161 32.9
Prupe.2G240700 Prunus persica HOM05D001009 ORTHO05D000829 5.3e-10 69.7 166 30.7
TPR.G38424 Trifolium pratense HOM05D001009 ORTHO05D000829 5.3e-10 69.7 195 28.2
FvH4_7g23410 Fragaria vesca HOM05D001009 ORTHO05D000829 6.9e-10 69.3 190 28.9
FAN06G0325 Fragaria x ananassa HOM05D001009 ORTHO05D000829 6.9e-10 69.3 190 28.9
Nn6g31598 Nelumbo nucifera HOM05D001009 ORTHO05D000829 6.9e-10 69.3 176 30.1
Os01g0143300 Oryza sativa ssp. japonica HOM05D001009 ORTHO05D000829 6.9e-10 69.3 172 32.0
Duzib106G0916 Durio zibethinus HOM05D001009 ORTHO05D000829 9.0e-10 68.9 162 32.1
FAN06G3918 Fragaria x ananassa HOM05D001009 ORTHO05D000829 9.0e-10 68.9 190 28.9
FAN10G4249 Fragaria x ananassa HOM05D001009 ORTHO05D000829 9.0e-10 68.9 190 28.9
Glyma.14G065700 Glycine max HOM05D001009 ORTHO05D000829 9.0e-10 68.9 163 29.4
Hma1.2p1_0026F.1_g016350 Hydrangea macrophylla HOM05D001009 ORTHO05D000829 9.0e-10 68.9 192 29.7
Hma1.2p1_2902F.1_g330050 Hydrangea macrophylla HOM05D001009 ORTHO05D000829 9.0e-10 68.9 192 29.7
Nitab4.5_0000987g0110 Nicotiana tabacum HOM05D001009 ORTHO05D000829 9.0e-10 68.9 164 30.5
RcHm_v2.0_Chr1g0368531 Rosa chinensis HOM05D001009 ORTHO05D000829 9.0e-10 68.9 160 30.6
Sed0014530 Sechium edule HOM05D001009 ORTHO05D000829 9.0e-10 68.9 197 28.4
Ah.10g037100 Amaranthus hybridus HOM05D001009 ORTHO05D000829 1.2e-09 68.6 162 30.2
CAN.G774.39 Capsicum annuum HOM05D001009 ORTHO05D000829 1.2e-09 68.6 165 31.5
CAN.G774.44 Capsicum annuum HOM05D001009 ORTHO05D000829 1.2e-09 68.6 165 31.5
FAN03G2210 Fragaria x ananassa HOM05D001009 ORTHO05D000829 1.2e-09 68.6 190 28.9
Gohir.A05G347400 Gossypium hirsutum HOM05D001009 ORTHO05D000829 1.2e-09 68.6 191 28.8
vmacro10213 Vaccinium macrocarpon HOM05D001009 ORTHO05D000829 1.2e-09 68.6 163 31.3
AUR62040690 Chenopodium quinoa HOM05D001009 ORTHO05D000829 1.5e-09 68.2 161 30.4
MD01G1140100 Malus domestica HOM05D001009 ORTHO05D000829 2.0e-09 67.8 165 30.9
Sabra06G0068500 Salix brachista HOM05D001009 ORTHO05D000829 2.0e-09 67.8 186 29.0
Sed0016308 Sechium edule HOM05D001009 ORTHO05D000829 2.0e-09 67.8 167 29.3
SGA_v2.0_scaffold2G00985 Striga asiatica HOM05D001009 ORTHO05D000829 2.0e-09 67.8 162 33.3
Potri.010G198600 Populus trichocarpa HOM05D001009 ORTHO05D000829 2.6e-09 67.4 162 29.0
Zm00001eb124560 Zea mays HOM05D001009 ORTHO05D000829 2.6e-09 67.4 201 29.4
Cfa001417 Carpinus fangiana HOM05D001009 ORTHO05D000829 3.4e-09 67.0 163 30.7
MD12G1094400 Malus domestica HOM05D001009 ORTHO05D000829 3.4e-09 67.0 165 30.9
Ca_05905_v3 Cicer arietinum L. HOM05D001009 ORTHO05D000829 4.5e-09 66.6 193 28.0
Actinidia02375 Actinidia chinensis HOM05D001009 ORTHO05D000829 5.8e-09 66.2 165 31.5
ATR0559G287 Amborella trichopoda HOM05D001009 ORTHO05D000829 5.8e-09 66.2 190 29.5
MD07G1204400 Malus domestica HOM05D001009 ORTHO05D000829 5.8e-09 66.2 165 30.9
Potri.006G090700 Populus trichocarpa HOM05D001009 ORTHO05D000829 5.8e-09 66.2 186 28.0
THA.LOC104810176 Tarenaya hassleriana HOM05D001009 ORTHO05D000829 5.8e-09 66.2 167 28.7
Glyma.02G251000 Glycine max HOM05D001009 ORTHO05D000829 7.6e-09 65.9 163 28.2
Gorai.011G269600 Gossypium raimondii HOM05D001009 ORTHO05D000829 7.6e-09 65.9 161 31.1
Manes.08G086600 Manihot esculenta HOM05D001009 ORTHO05D000829 7.6e-09 65.9 193 30.1
TPR.G27325 Trifolium pratense HOM05D001009 ORTHO05D000829 1.0e-08 65.5 160 29.4
TWI15G0684 Tripterygium wilfordii HOM05D001009 ORTHO05D000829 1.0e-08 65.5 169 29.6
Aa31LG5G19830 Aethionema arabicum HOM05D001009 ORTHO05D000829 1.3e-08 65.1 163 30.1
Carub.0005s2235 Capsella rubella HOM05D001009 ORTHO05D000829 1.3e-08 65.1 165 27.9
Manes.09G096200 Manihot esculenta HOM05D001009 ORTHO05D000829 1.3e-08 65.1 167 30.5
Atru.chr12.341 Acer truncatum HOM05D001009 ORTHO05D000829 1.7e-08 64.7 194 26.8
AT3G55605 Arabidopsis thaliana HOM05D001009 ORTHO05D000829 1.7e-08 64.7 164 28.7
Gohir.D10G235808 Gossypium hirsutum HOM05D001009 ORTHO05D000829 1.7e-08 64.7 161 31.1
Lalb_Chr19g0125151 Lupinus albus HOM05D001009 ORTHO05D000829 1.7e-08 64.7 190 29.5
Zm00001eb381960 Zea mays HOM05D001009 ORTHO05D000829 1.7e-08 64.7 189 29.1
Actinidia13891 Actinidia chinensis HOM05D001009 ORTHO05D000829 2.2e-08 64.3 162 29.0
Aqoxy1G00831 Aquilegia oxysepala HOM05D001009 ORTHO05D000829 2.2e-08 64.3 164 31.1
Sabra10G0152800 Salix brachista HOM05D001009 ORTHO05D000829 2.9e-08 63.9 166 29.5
TAR381G0448 Trochodendron aralioides HOM05D001009 ORTHO05D000829 2.9e-08 63.9 216 28.7
Aa31LG10G10610 Aethionema arabicum HOM05D001009 ORTHO05D000829 3.8e-08 63.5 160 28.1
arahy.Tifrunner.gnm1.ann1.H18GF1 Arachis hypogaea HOM05D001009 ORTHO05D000829 3.8e-08 63.5 193 29.5
MBI01_g22963_MAGBIO Magnolia biondii HOM05D001009 ORTHO05D000829 3.8e-08 63.5 193 28.5
QL08p061636 Quercus lobata HOM05D001009 ORTHO05D000829 3.8e-08 63.5 162 27.8
Manes.07G120600 Manihot esculenta HOM05D001009 ORTHO05D000829 4.9e-08 63.2 166 30.1
HPP92_001610 Vanilla planifolia HOM05D001009 ORTHO05D000829 4.9e-08 63.2 202 28.2
Lj2A88T72 Lonicera japonica HOM05D001009 ORTHO05D000829 6.5e-08 62.8 163 30.7
Nn2g11241 Nelumbo nucifera HOM05D001009 ORTHO05D000829 6.5e-08 62.8 156 28.2
Potri.010G198500 Populus trichocarpa HOM05D001009 ORTHO05D000829 6.5e-08 62.8 165 27.9
TAR636G1456 Trochodendron aralioides HOM05D001009 ORTHO05D000829 6.5e-08 62.8 164 28.7
TAR636G2594 Trochodendron aralioides HOM05D001009 ORTHO05D000829 6.5e-08 62.8 164 28.7
arahy.Tifrunner.gnm1.ann1.W9PXM2 Arachis hypogaea HOM05D001009 ORTHO05D000829 8.4e-08 62.4 188 30.3
Nitab4.5_0006374g0010 Nicotiana tabacum HOM05D001009 ORTHO05D000829 1.1e-07 62.0 164 27.4
Psat3g135840 Pisum sativum HOM05D001009 ORTHO05D000829 1.1e-07 62.0 199 28.1
Ca_05446_v3 Cicer arietinum L. HOM05D001009 ORTHO05D000829 1.9e-07 61.2 158 29.7
ECA232G3500 Erigeron canadensis HOM05D001009 ORTHO05D000829 1.9e-07 61.2 192 29.2
HanXRQChr15g0496451 Helianthus annuus HOM05D001009 ORTHO05D000829 1.9e-07 61.2 190 27.9
Rhsim09G0168700 Rhododendron simsii HOM05D001009 ORTHO05D000829 1.9e-07 61.2 165 29.7
Aqoxy6G03034 Aquilegia oxysepala HOM05D001009 ORTHO05D000829 2.5e-07 60.8 165 28.5
Haze_17127 Corylus avellana HOM05D001009 ORTHO05D000829 2.5e-07 60.8 174 29.9
Lalb_Chr03g0042541 Lupinus albus HOM05D001009 ORTHO05D000829 2.5e-07 60.8 163 27.6
PGSC0003DMG400021701 Solanum tuberosum HOM05D001009 ORTHO05D000829 2.5e-07 60.8 241 25.7
SHI03693 Sapria himalayana HOM05D001009 ORTHO05D000829 3.2e-07 60.5 175 30.3
DCAR_011512 Daucus carota HOM05D001009 ORTHO05D000829 4.2e-07 60.1 222 27.9
Thhalv10010645m.g Eutrema salsugineum HOM05D001009 ORTHO05D000829 4.2e-07 60.1 194 24.7
Phvul.008G115200 Phaseolus vulgaris HOM05D001009 ORTHO05D000829 4.2e-07 60.1 189 26.5
CANSAT35G1073 Cannabis sativa HOM05D001009 ORTHO05D000829 5.5e-07 59.7 163 30.1
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 5.5e-07 59.7 158 27.8
Lsat_1_v5_gn_9_63501 Lactuca sativa HOM05D001009 ORTHO05D000829 5.5e-07 59.7 193 28.5
Solyc03g079930.3 Solanum lycopersicum HOM05D001009 ORTHO05D000829 5.5e-07 59.7 238 26.9
Sopen03g027200 Solanum pennellii HOM05D001009 ORTHO05D000829 5.5e-07 59.7 238 26.5
VMungo1383G3310 Vigna mungo HOM05D001009 ORTHO05D000829 5.5e-07 59.7 182 27.5
CARHR165660 Cardamine hirsuta HOM05D001009 ORTHO05D000829 9.3e-07 58.9 162 24.7
Sabra16G0102400 Salix brachista HOM05D000229 ORTHO05D000182 9.3e-07 58.9 157 28.0
Aqoxy2G02348 Aquilegia oxysepala HOM05D001009 ORTHO05D000829 1.2e-06 58.5 163 29.4
Cpa.g.sc33.170 Carica papaya HOM05D001009 ORTHO05D000829 1.2e-06 58.5 158 30.4
Potri.016G102200 Populus trichocarpa HOM05D001009 ORTHO05D000829 1.2e-06 58.5 157 26.8
Sed0007137 Sechium edule HOM05D001009 ORTHO05D000829 1.6e-06 58.2 167 29.9
Migut.F01285 Erythranthe guttata HOM05D001009 ORTHO05D000829 2.1e-06 57.8 194 24.7
Sp5g06870 Schrenkiella parvula HOM05D001009 ORTHO05D000829 2.1e-06 57.8 161 25.5
Hund16053 Selenicereus undatus HOM05D001009 ORTHO05D000829 2.1e-06 57.8 166 28.9
Atru.chr8.2062 Acer truncatum HOM05D001009 ORTHO05D000829 2.7e-06 57.4 190 27.4
BcaC02g09772 Brassica carinata HOM05D001009 ORTHO05D000829 2.7e-06 57.4 194 26.8
C04p36760 Brassica napus HOM05D001009 ORTHO05D000829 2.7e-06 57.4 194 26.8
Sed0001214 Sechium edule HOM05D001009 ORTHO05D000829 2.7e-06 57.4 164 28.0
Sed0028218 Sechium edule HOM05D001009 ORTHO05D000829 2.7e-06 57.4 184 26.1
FAN09G3631 Fragaria x ananassa HOM05D001009 ORTHO05D000829 3.5e-06 57.0 156 28.2
Glyma.18G187800 Glycine max HOM05D001009 ORTHO05D000829 3.5e-06 57.0 189 25.9
Lj1g0004447 Lotus japonicus HOM05D001009 ORTHO05D000829 3.5e-06 57.0 163 27.0
Ciclev10012447m.g Citrus clementina HOM05D001009 ORTHO05D000829 4.6e-06 56.6 190 29.5
HanXRQChr09g0247071 Helianthus annuus HOM05D001009 ORTHO05D000829 4.6e-06 56.6 194 26.8
BcaB02g08407 Brassica carinata HOM05D001009 ORTHO05D000829 6.1e-06 56.2 220 25.9
BolC4t25121H Brassica oleracea HOM05D001009 ORTHO05D000829 6.1e-06 56.2 195 27.2
BraA04t16147Z Brassica rapa HOM05D001009 ORTHO05D000829 6.1e-06 56.2 162 27.8
FAN05G5018 Fragaria x ananassa HOM05D000229 ORTHO05D000182 6.1e-06 56.2 155 29.0
FAN14G5558 Fragaria x ananassa HOM05D001009 ORTHO05D000829 6.1e-06 56.2 156 28.8
Atru.chr2.339 Acer truncatum HOM05D001009 ORTHO05D000829 7.9e-06 55.8 187 27.3
A04p04370 Brassica napus HOM05D001009 ORTHO05D000829 7.9e-06 55.8 200 26.0
Nitab4.5_0003362g0050 Nicotiana tabacum HOM05D001009 ORTHO05D000829 7.9e-06 55.8 189 29.1
THA.LOC104823266 Tarenaya hassleriana HOM05D001009 ORTHO05D000829 7.9e-06 55.8 156 28.8


User provided reference genes

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