Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012820 Daucus carota HOM05D001756 ORTHO05D001581 9.4e-40 166.4 83 100.0
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 8.8e-14 80.1 78 59.0
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 2.7e-10 68.6 80 50.0
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 5.9e-10 67.4 83 49.4
Peaxi162Scf00340g00059 Petunia axillaris HOM05D001756 ORTHO05D001581 5.9e-10 67.4 75 54.7
vmacro01947 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 7.7e-10 67.0 80 47.5
Hma1.2p1_0210F.1_g089330 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 5.0e-09 64.3 76 48.7
vmacro01948 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 5.0e-09 64.3 78 44.9
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 6.5e-09 63.9 84 48.8
Peaxi162Scf00340g00412 Petunia axillaris HOM05D001756 ORTHO05D001581 8.5e-09 63.5 74 48.6
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 8.5e-09 63.5 86 45.3
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 1.1e-08 63.2 84 45.2
Nitab4.5_0009491g0010 Nicotiana tabacum HOM05D001756 ORTHO05D001581 1.1e-08 63.2 77 49.4
GSVIVG01004437001 Vitis vinifera HOM05D001756 ORTHO05D001581 1.1e-08 63.2 82 42.7
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.5e-08 62.8 81 49.4
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 1.5e-08 62.8 83 43.4
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 1.5e-08 62.8 78 44.9
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 1.9e-08 62.4 77 44.2
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 1.9e-08 62.4 82 46.3
Ciclev10026870m.g Citrus clementina HOM05D001756 ORTHO05D001581 2.5e-08 62.0 83 49.4
Duzib264G0169 Durio zibethinus HOM05D001756 ORTHO05D001581 2.5e-08 62.0 82 43.9
Hma1.2p1_1051F.1_g252120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 2.5e-08 62.0 80 46.2
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.5e-08 62.0 78 43.6
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 3.2e-08 61.6 83 45.8
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 4.2e-08 61.2 78 46.2
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 4.2e-08 61.2 83 45.8
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.5e-08 60.8 80 47.5
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 7.2e-08 60.5 82 46.3
Duzib147G1196 Durio zibethinus HOM05D001756 ORTHO05D001581 9.4e-08 60.1 79 45.6
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.2e-07 59.7 80 45.0
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.2e-07 59.7 80 45.0
RhsimUnG0122800 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.2e-07 59.7 89 49.4
CARHR158860 Cardamine hirsuta HOM05D001756 ORTHO05D001581 1.6e-07 59.3 78 47.4
Cfa004383 Carpinus fangiana HOM05D001756 ORTHO05D001581 1.6e-07 59.3 80 46.2
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 1.6e-07 59.3 83 43.4
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.1e-07 58.9 78 39.7
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 2.1e-07 58.9 81 42.0
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 2.7e-07 58.5 76 43.4
COL.COLO4_11608 Corchorus olitorius HOM05D001756 ORTHO05D001581 2.7e-07 58.5 83 45.8
Nitab4.5_0001099g0060 Nicotiana tabacum HOM05D001756 ORTHO05D001581 2.7e-07 58.5 79 43.0
Peaxi162Scf00016g03021 Petunia axillaris HOM05D001756 ORTHO05D001581 2.7e-07 58.5 79 46.8
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.7e-07 58.5 89 48.3
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 2.7e-07 58.5 77 46.8
vmacro21422 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 2.7e-07 58.5 81 46.9
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.6e-07 58.2 78 39.7
RhsimUnG0041200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.6e-07 58.2 80 42.5
RhsimUnG0123200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.6e-07 58.2 80 42.5
Thecc.02G119700 Theobroma cacao HOM05D001756 ORTHO05D001581 3.6e-07 58.2 86 43.0
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 3.6e-07 58.2 82 43.9
THA.LOC104827714 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 4.7e-07 57.8 80 46.2
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 6.1e-07 57.4 83 39.8
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 6.1e-07 57.4 76 43.4
CAN.G606.70 Capsicum annuum HOM05D001756 ORTHO05D001581 6.1e-07 57.4 80 45.0
Duzib132G0635 Durio zibethinus HOM05D001756 ORTHO05D001581 6.1e-07 57.4 87 41.4
MBI16_g16475_MAGBIO Magnolia biondii HOM05D001756 ORTHO05D001581 6.1e-07 57.4 80 41.2
Nitab4.5_0009491g0020 Nicotiana tabacum HOM05D001756 ORTHO05D001581 6.1e-07 57.4 100 38.0
Oeu025312.1 Olea europaea HOM05D001756 ORTHO05D001581 6.1e-07 57.4 79 44.3
Sopen04g031220 Solanum pennellii HOM05D001756 ORTHO05D001581 6.1e-07 57.4 76 48.7
Actinidia11965 Actinidia chinensis HOM05D001756 ORTHO05D001581 8.0e-07 57.0 81 42.0
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 8.0e-07 57.0 88 42.0
Glyma.17G233500 Glycine max HOM05D001756 ORTHO05D001581 8.0e-07 57.0 84 45.2
Solyc04g077580.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 8.0e-07 57.0 76 48.7
vmacro18016 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 8.0e-07 57.0 85 44.7
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 1.0e-06 56.6 81 45.7
Duzib093G0345 Durio zibethinus HOM05D001756 ORTHO05D001581 1.0e-06 56.6 78 42.3
MBI16_g32087_MAGBIO Magnolia biondii HOM05D001756 ORTHO05D001581 1.0e-06 56.6 80 41.2
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 1.0e-06 56.6 81 44.4
PGR004G0933 Punica granatum HOM05D001756 ORTHO05D001581 1.0e-06 56.6 76 42.1
A09p42920 Brassica napus HOM05D001756 ORTHO05D001581 1.4e-06 56.2 77 45.5
C01p30590 Brassica napus HOM05D001756 ORTHO05D001581 1.4e-06 56.2 77 45.5
BolC1t02995H Brassica oleracea HOM05D001756 ORTHO05D001581 1.4e-06 56.2 77 45.5
BraA09t39759Z Brassica rapa HOM05D001756 ORTHO05D001581 1.4e-06 56.2 77 45.5
Eucgr.I02494 Eucalyptus grandis HOM05D001756 ORTHO05D001581 1.4e-06 56.2 79 44.3
Glyma.14G089063 Glycine max HOM05D001756 ORTHO05D001581 1.4e-06 56.2 84 45.2
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.4e-06 56.2 79 41.8
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.4e-06 56.2 79 41.8
Rhsim08G0091400 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.4e-06 56.2 89 47.2
A01p24530 Brassica napus HOM05D001756 ORTHO05D001581 1.8e-06 55.8 77 44.2
BraA01t02363Z Brassica rapa HOM05D001756 ORTHO05D001581 1.8e-06 55.8 77 44.2
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 1.8e-06 55.8 81 38.3
Sabra07G0005100 Salix brachista HOM05D001756 ORTHO05D001581 1.8e-06 55.8 81 44.4
Sp2g28960 Schrenkiella parvula HOM05D001756 ORTHO05D001581 1.8e-06 55.8 80 50.0
AL334U10030 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 3.0e-06 55.1 74 48.6
AL8G43592 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 3.0e-06 55.1 74 48.6
AT3G49780 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 3.0e-06 55.1 78 43.6
Eucgr.H02325 Eucalyptus grandis HOM05D001756 ORTHO05D001581 3.0e-06 55.1 84 41.7
Lj5g0025862 Lotus japonicus HOM05D001756 ORTHO05D001581 3.0e-06 55.1 84 42.9
QL12p038416 Quercus lobata HOM05D001756 ORTHO05D001581 3.0e-06 55.1 80 42.5
SalBow3G1129 Salvia bowleyana HOM05D001756 ORTHO05D001581 3.0e-06 55.1 75 44.0
AL5G29770 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 4.0e-06 54.7 77 41.6
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 4.0e-06 54.7 77 40.3
Gorai.008G085100 Gossypium raimondii HOM05D001756 ORTHO05D001581 4.0e-06 54.7 90 42.2
PGSC0003DMG400004941 Solanum tuberosum HOM05D001756 ORTHO05D001581 4.0e-06 54.7 76 47.4
Thecc.08G085400 Theobroma cacao HOM05D001756 ORTHO05D001581 4.0e-06 54.7 79 40.5
GSVIVG01009309001 Vitis vinifera HOM05D001756 ORTHO05D001581 4.0e-06 54.7 82 37.8
Actinidia00357 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.2e-06 54.3 80 45.0
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.2e-06 54.3 74 39.2
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 5.2e-06 54.3 78 37.2
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 5.2e-06 54.3 78 37.2
Duzib187G0009 Durio zibethinus HOM05D001756 ORTHO05D001581 5.2e-06 54.3 83 42.2
Gohir.A11G212500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 5.2e-06 54.3 83 39.8
Nn5g30652 Nelumbo nucifera HOM05D001756 ORTHO05D001581 5.2e-06 54.3 75 40.0
TWI77G0501 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 5.2e-06 54.3 86 40.7
CANSAT25G3420 Cannabis sativa HOM05D001756 ORTHO05D001581 6.8e-06 53.9 88 40.9
CAN.G1343.3 Capsicum annuum HOM05D001756 ORTHO05D001581 6.8e-06 53.9 83 39.8
Glyma.10G255800 Glycine max HOM05D001756 ORTHO05D001581 6.8e-06 53.9 80 45.0
Glyma.20G135700 Glycine max HOM05D001756 ORTHO05D001581 6.8e-06 53.9 80 45.0
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.8e-06 53.9 79 40.5
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.8e-06 53.9 86 41.9
Gohir.D11G210700 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.8e-06 53.9 86 36.0
Gorai.007G226000 Gossypium raimondii HOM05D001756 ORTHO05D001581 6.8e-06 53.9 86 36.0
Lalb_Chr09g0323711 Lupinus albus HOM05D001756 ORTHO05D001581 6.8e-06 53.9 77 40.3
Nitab4.5_0000142g0340 Nicotiana tabacum HOM05D001756 ORTHO05D001581 6.8e-06 53.9 78 43.6
Oeu028918.1 Olea europaea HOM05D001756 ORTHO05D001581 6.8e-06 53.9 78 42.3
arahy.Tifrunner.gnm1.ann1.GJCV3J Arachis hypogaea HOM05D001756 ORTHO05D001581 8.8e-06 53.5 86 43.0
Cc02_g20030 Coffea canephora HOM05D001756 ORTHO05D001581 8.8e-06 53.5 83 42.2
Cc10_g07550 Coffea canephora HOM05D001756 ORTHO05D001581 8.8e-06 53.5 79 38.0
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 8.8e-06 53.5 78 42.3
Gohir.D12G076500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 8.8e-06 53.5 90 41.1
Nitab4.5_0002525g0020 Nicotiana tabacum HOM05D001756 ORTHO05D001581 8.8e-06 53.5 76 39.5
Prupe.1G420000 Prunus persica HOM05D001756 ORTHO05D001581 8.8e-06 53.5 85 40.0
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 8.8e-06 53.5 80 42.5


User provided reference genes

Program Settings