Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 1.9e-72 275.8 145 100.0
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 6.2e-31 137.9 119 53.8
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 1.5e-29 133.3 124 53.2
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 9.9e-29 130.6 120 54.2
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 4.9e-28 128.3 117 52.1
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 1.1e-27 127.1 119 51.3
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 1.4e-27 126.7 114 53.5
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 1.4e-27 126.7 114 45.6
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 5.5e-27 124.8 116 50.9
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 7.1e-27 124.4 114 54.4
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 4.6e-26 121.7 112 43.8
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 1.3e-25 120.2 114 50.0
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 1.8e-25 119.8 114 49.1
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 1.8e-25 119.8 123 48.0
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 3.0e-25 119.0 114 51.8
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 3.0e-25 119.0 112 46.4
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 5.1e-25 118.2 118 49.2
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 1.5e-24 116.7 114 51.8
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 3.3e-24 115.5 117 48.7
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 4.3e-24 115.2 114 46.5
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 5.6e-24 114.8 114 50.9
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 9.6e-24 114.0 119 47.9
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 9.6e-24 114.0 117 44.4
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 1.6e-23 113.2 114 46.5
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 1.6e-23 113.2 117 44.4
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 1.6e-23 113.2 114 49.1
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 2.1e-23 112.8 115 44.3
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 2.1e-23 112.8 114 48.2
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.1e-23 112.8 114 48.2
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.1e-23 112.8 114 48.2
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 2.1e-23 112.8 119 43.7
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.8e-23 112.5 114 48.2
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 3.7e-23 112.1 114 49.1
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 6.2e-23 111.3 114 48.2
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 6.2e-23 111.3 114 48.2
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 6.2e-23 111.3 108 45.4
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 1.1e-22 110.5 114 46.5
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 1.1e-22 110.5 114 49.1
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 1.8e-22 109.8 114 48.2
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 2.4e-22 109.4 114 49.1
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 2.4e-22 109.4 114 50.0
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 3.1e-22 109.0 114 49.1
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 4.0e-22 108.6 114 46.5
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 5.3e-22 108.2 114 45.6
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 6.9e-22 107.8 114 44.7
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 1.5e-21 106.7 111 45.0
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 2.6e-21 105.9 120 47.5
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 3.4e-21 105.5 114 44.7
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 5.8e-21 104.8 114 44.7
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 5.8e-21 104.8 119 46.2
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 5.8e-21 104.8 114 44.7
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 1.3e-20 103.6 118 46.6
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 1.3e-20 103.6 118 46.6
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 1.7e-20 103.2 114 42.1
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 1.7e-20 103.2 114 44.7
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 2.2e-20 102.8 114 46.5
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 2.9e-20 102.4 114 46.5
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 3.8e-20 102.1 105 42.9
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 6.5e-20 101.3 114 42.1
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 6.5e-20 101.3 114 42.1
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 6.5e-20 101.3 114 43.9
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 1.1e-19 100.5 114 46.5
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.1e-19 100.5 114 41.2
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 1.4e-19 100.1 111 45.9
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 1.9e-19 99.8 104 42.3
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 2.5e-19 99.4 114 46.5
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 2.5e-19 99.4 119 43.7
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 3.2e-19 99.0 114 43.9
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 3.2e-19 99.0 114 42.1
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 3.2e-19 99.0 114 42.1
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 5.5e-19 98.2 114 41.2
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 5.5e-19 98.2 114 46.5
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 5.5e-19 98.2 114 43.0
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 7.1e-19 97.8 114 43.9
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 7.1e-19 97.8 114 41.2
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 1.6e-18 96.7 114 41.2
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 2.7e-18 95.9 114 43.0
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 3.5e-18 95.5 111 41.4
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 4.6e-18 95.1 114 40.4
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 4.6e-18 95.1 114 41.2
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 7.9e-18 94.4 118 44.1
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 1.8e-17 93.2 115 40.0
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 3.9e-17 92.0 114 37.7
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 2.5e-16 89.4 104 40.4
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 3.3e-16 89.0 115 39.1
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 7.4e-16 87.8 65 64.6
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 1.3e-15 87.0 114 36.8
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 1.4e-14 83.6 66 51.5
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 2.4e-14 82.8 77 49.4
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 9.0e-14 80.9 84 39.3
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 1.0e-12 77.4 66 48.5
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 6.5e-12 74.7 65 52.3
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 2.1e-10 69.7 76 42.1
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 7.9e-10 67.8 65 46.2
Peaxi162Scf00160g01332 Petunia axillaris HOM05D007557 ORTHO05D009573 2.3e-09 66.2 58 50.0
Peaxi162Scf69669g00006 Petunia axillaris HOM05D007557 ORTHO05D009573 2.3e-09 66.2 58 50.0
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 6.7e-09 64.7 75 38.7
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 5.3e-06 55.1 107 32.7


User provided reference genes

Program Settings