Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 2.0e-189 665.6 338 100.0
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.2e-111 406.4 344 61.6
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 2.4e-110 402.9 346 63.0
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 1.7e-108 396.7 347 60.5
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 8.6e-108 394.4 343 59.8
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 6.2e-106 388.3 343 60.1
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 8.9e-105 384.4 343 57.1
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 1.5e-104 383.6 345 59.7
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.0e-104 383.3 345 58.8
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 9.8e-104 380.9 343 58.9
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 2.2e-103 379.8 334 59.9
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.9e-103 379.4 345 58.6
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 6.4e-103 378.3 337 59.6
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 7.1e-102 374.8 345 58.0
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 9.2e-102 374.4 344 57.6
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 4.6e-101 372.1 345 57.7
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 7.8e-101 371.3 347 56.2
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 3.3e-99 365.9 316 60.4
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 3.3e-99 365.9 312 59.6
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 5.6e-99 365.2 341 57.2
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 5.6e-99 365.2 344 56.1
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 9.5e-99 364.4 344 57.0
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 9.5e-99 364.4 339 57.2
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 2.1e-98 363.2 346 56.9
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 2.8e-98 362.8 325 57.5
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.8e-98 362.8 304 61.5
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 3.6e-98 362.5 325 57.5
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.6e-98 362.5 302 60.6
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 3.6e-98 362.5 297 61.3
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 4.7e-98 362.1 343 56.6
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 6.2e-98 361.7 349 57.9
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 6.2e-98 361.7 349 57.9
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 6.2e-98 361.7 349 57.9
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 6.2e-98 361.7 349 57.9
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 6.2e-98 361.7 342 56.7
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 8.1e-98 361.3 349 57.0
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 8.1e-98 361.3 313 61.0
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.1e-97 360.9 305 59.7
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.1e-97 360.9 342 55.8
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 1.4e-97 360.5 343 56.0
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 3.1e-97 359.4 348 56.0
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 4.0e-97 359.0 349 57.6
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 6.8e-97 358.2 349 57.3
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 6.8e-97 358.2 335 57.0
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 8.9e-97 357.8 342 55.6
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 8.9e-97 357.8 342 56.4
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 8.9e-97 357.8 355 54.9
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 2.0e-96 356.7 350 52.9
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 5.8e-96 355.1 348 54.6
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 5.8e-96 355.1 352 55.1
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 9.9e-96 354.4 335 55.5
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.3e-95 354.0 354 54.8
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 1.3e-95 354.0 311 59.8
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 1.7e-95 353.6 347 55.3
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 1.7e-95 353.6 349 56.4
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 6.4e-95 351.7 345 55.4
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 1.1e-94 350.9 341 55.4
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.1e-94 350.9 346 54.9
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.4e-94 350.5 349 56.7
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 2.4e-94 349.7 344 56.1
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 2.4e-94 349.7 351 55.6
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.2e-93 347.4 344 54.4
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 1.6e-93 347.1 342 54.4
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 2.1e-93 346.7 336 56.2
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 3.5e-93 345.9 336 56.8
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.0e-92 344.4 335 56.1
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 3.9e-92 342.4 346 54.0
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.5e-91 339.7 339 55.5
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 4.3e-91 339.0 348 54.0
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.6e-90 337.0 337 55.2
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 1.6e-90 337.0 339 55.2
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 2.1e-90 336.7 327 56.0
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 2.1e-90 336.7 299 60.5
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 2.8e-90 336.3 337 54.3
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 6.2e-90 335.1 339 55.2
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 8.1e-90 334.7 368 48.4
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.8e-89 333.6 333 52.3
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 4.0e-89 332.4 346 52.0
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.7e-87 327.0 344 50.9
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 2.2e-87 326.6 347 50.1
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 2.9e-87 326.2 311 56.6
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 8.4e-87 324.7 398 46.7
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 5.4e-86 322.0 302 55.0
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 7.1e-86 321.6 344 50.6
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 4.6e-85 318.9 265 60.0
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 2.3e-84 316.6 313 54.6
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 4.8e-82 308.9 344 50.0
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 3.4e-80 302.8 270 60.0
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 7.6e-80 301.6 260 59.2
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 9.3e-78 294.7 365 47.4
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 2.1e-77 293.5 347 48.7
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 4.8e-74 282.3 338 47.9
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 9.9e-72 274.6 269 53.9
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.9e-70 270.4 337 46.9
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 7.9e-69 265.0 325 46.2
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.1e-65 254.6 397 40.6
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 2.4e-65 253.4 302 46.7
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.2e-53 214.5 264 48.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 1.8e-49 200.7 256 44.5
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.1e-45 187.2 176 54.5
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.0e-44 184.9 361 34.9
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 2.0e-40 170.6 133 63.2
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 5.5e-38 162.5 213 46.5
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 4.8e-34 149.4 198 42.9
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 4.1e-33 146.4 136 53.7
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-32 144.8 136 52.9
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-32 144.4 136 53.7
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 1.3e-31 141.4 179 45.8
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 1.0e-28 131.7 165 44.8
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 5.7e-27 125.9 129 52.7
DCAR_000788 Daucus carota HOM05D006843 ORTHO05D008517 2.5e-22 110.5 84 71.4
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 4.0e-20 103.2 110 52.7
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.5e-19 101.3 241 30.3
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.0e-19 100.9 94 56.4
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 6.3e-18 95.9 198 31.3
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 8.0e-13 79.0 116 39.7
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 8.6e-07 58.9 61 47.5


User provided reference genes

Program Settings