Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 2.1e-163 578.9 283 100.0
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 3.5e-70 269.2 148 87.2
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 6.0e-70 268.5 163 79.8
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 7.8e-70 268.1 245 59.2
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 1.3e-69 267.3 148 86.5
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 1.1e-68 264.2 148 85.1
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 1.1e-68 264.2 148 85.1
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 1.5e-68 263.8 148 85.1
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 2.5e-68 263.1 148 85.1
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 3.3e-68 262.7 148 83.8
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 5.6e-68 261.9 148 84.5
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 7.3e-68 261.5 148 83.1
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 7.3e-68 261.5 148 83.1
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 9.5e-68 261.2 148 83.8
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 9.5e-68 261.2 148 82.4
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 9.5e-68 261.2 148 82.4
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 2.8e-67 259.6 148 85.1
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 3.6e-67 259.2 148 84.5
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 4.7e-67 258.8 148 81.8
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 4.7e-67 258.8 148 83.8
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 6.2e-67 258.5 148 84.5
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 6.2e-67 258.5 148 81.8
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 1.4e-66 257.3 146 82.9
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 1.8e-66 256.9 148 84.5
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 3.1e-66 256.1 148 81.1
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 4.0e-66 255.8 178 70.8
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 5.2e-66 255.4 148 81.8
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 5.2e-66 255.4 148 81.1
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 5.2e-66 255.4 148 82.4
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 5.2e-66 255.4 148 81.1
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 5.2e-66 255.4 148 82.4
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 1.2e-65 254.2 148 79.7
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 1.2e-65 254.2 148 81.1
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 1.5e-65 253.8 148 80.4
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 2.0e-65 253.4 148 78.4
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 2.0e-65 253.4 145 83.4
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 2.6e-65 253.1 148 79.7
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 2.6e-65 253.1 148 82.4
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 7.5e-65 251.5 145 82.8
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 7.5e-65 251.5 188 66.5
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 1.3e-64 250.8 148 79.7
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 1.7e-64 250.4 148 79.1
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 1.7e-64 250.4 148 78.4
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 2.2e-64 250.0 193 66.3
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 3.7e-64 249.2 156 76.3
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 4.9e-64 248.8 148 81.1
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 4.9e-64 248.8 148 79.1
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 6.4e-64 248.4 148 77.7
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 1.4e-63 247.3 148 79.7
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 1.9e-63 246.9 145 78.6
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 1.9e-63 246.9 148 78.4
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 1.9e-63 246.9 148 77.7
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 3.2e-63 246.1 148 77.7
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 4.1e-63 245.7 148 81.1
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 4.1e-63 245.7 148 76.4
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 9.2e-63 244.6 148 76.4
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 1.6e-62 243.8 148 77.7
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 1.6e-62 243.8 148 77.0
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 2.7e-62 243.0 147 77.6
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 1.3e-61 240.7 148 77.7
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 3.9e-61 239.2 148 76.4
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 6.6e-61 238.4 148 76.4
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 1.9e-60 236.9 148 75.7
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 9.5e-60 234.6 133 83.5
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 6.2e-59 231.9 149 73.2
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 5.2e-58 228.8 153 73.2
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 5.2e-58 228.8 133 81.2
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 4.9e-56 222.2 135 79.3
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 2.7e-54 216.5 168 68.5
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 8.1e-51 204.9 148 68.2
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 8.1e-51 204.9 205 53.7
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 3.4e-49 199.5 124 74.2
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 3.0e-45 186.4 148 60.8
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 5.1e-45 185.7 114 74.6
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 6.6e-45 185.3 148 62.8
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 3.3e-44 183.0 148 62.8
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 9.6e-44 181.4 148 64.2
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 5.8e-33 145.6 91 71.4
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 4.9e-32 142.5 168 50.6
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 1.8e-29 134.0 94 66.0
SMO351G0286 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 1.6e-19 100.9 80 63.8
SMO119G0517 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 1.1e-18 98.2 80 61.2
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 2.6e-17 93.6 59 72.9


User provided reference genes

Program Settings