Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012627 Daucus carota HOM05D007427 ORTHO05D006413 2.2e-47 192.6 150 100.0
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 3.3e-11 72.4 81 53.1
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 2.4e-09 66.2 62 58.1
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 3.4e-08 62.4 57 57.9
ECA236G2240 Erigeron canadensis HOM05D007427 ORTHO05D006413 3.4e-08 62.4 73 47.9
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 5.9e-08 61.6 65 53.8
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 1.3e-07 60.5 74 48.6
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 1.7e-07 60.1 58 56.9
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 3.8e-07 58.9 75 46.7
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 3.8e-07 58.9 63 50.8
ClCG09G009270 Citrullus lanatus HOM05D007427 ORTHO05D006413 5.0e-07 58.5 53 62.3
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 5.0e-07 58.5 57 57.9
MSTRG.21440 Avicennia marina HOM05D007427 ORTHO05D006413 6.5e-07 58.2 66 51.5
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 6.5e-07 58.2 63 50.8
unitig_8.g3750 Utricularia gibba HOM05D007427 ORTHO05D006413 8.5e-07 57.8 59 50.8
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 1.1e-06 57.4 66 53.0
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 1.1e-06 57.4 60 53.3
SGA_v2.0_scaffold8G04664 Striga asiatica HOM05D007427 ORTHO05D006413 1.1e-06 57.4 64 54.7
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.4e-06 57.0 70 44.3
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 1.4e-06 57.0 72 47.2
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 1.9e-06 56.6 54 48.1
DCAR_004704 Daucus carota HOM05D007427 ORTHO05D006413 2.5e-06 56.2 82 47.6
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 2.5e-06 56.2 56 53.6
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 3.2e-06 55.8 70 42.9
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 3.2e-06 55.8 58 50.0
SGA_v2.0_scaffold1G00704 Striga asiatica HOM05D007427 ORTHO05D006413 3.2e-06 55.8 64 53.1
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 4.2e-06 55.5 76 50.0
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 4.2e-06 55.5 61 47.5
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 4.2e-06 55.5 73 45.2
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 4.2e-06 55.5 62 51.6
BcaNung00447 Brassica carinata HOM05D008344 ORTHO05D006413 5.5e-06 55.1 70 54.3
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 5.5e-06 55.1 55 50.9
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 7.2e-06 54.7 50 58.0
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 7.2e-06 54.7 76 43.4
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 7.2e-06 54.7 62 51.6
Oeu052110.1 Olea europaea HOM05D038651 ORTHO05D006413 7.2e-06 54.7 67 47.8
Oeu052111.1 Olea europaea HOM05D038651 ORTHO05D006413 7.2e-06 54.7 67 47.8
CsaV3_7G025650 Cucumis sativus L. HOM05D007427 ORTHO05D006413 9.4e-06 54.3 61 54.1
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 9.4e-06 54.3 62 48.4
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 9.4e-06 54.3 69 46.4


User provided reference genes

Program Settings