Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012597 Daucus carota HOM05D023779 ORTHO05D004107 5.8e-116 421.0 230 100.0
DCAR_031331 Daucus carota HOM05D023779 ORTHO05D004107 1.4e-53 213.8 193 60.1
DCAR_031246 Daucus carota HOM05D023779 ORTHO05D004107 1.6e-20 104.0 143 37.1
DCAR_017137 Daucus carota HOM05D037401 ORTHO05D004107 3.0e-19 99.8 130 38.5
DCAR_025699 Daucus carota HOM05D040820 ORTHO05D004107 1.4e-16 90.9 88 44.3
DCAR_029716 Daucus carota HOM05D023779 ORTHO05D025226 9.3e-13 78.2 71 43.7
DCAR_029480 Daucus carota HOM05D029452 ORTHO05D025226 1.9e-10 70.5 71 40.8
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 9.6e-10 68.2 106 32.1
FAN17G2186 Fragaria x ananassa HOM05D027620 ORTHO05D029384 1.3e-09 67.8 90 36.7
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 1.6e-09 67.4 106 32.1
QL09p032027 Quercus lobata HOM05D000017 ORTHO05D000013 2.1e-09 67.0 95 37.9
FvH4_1g29251 Fragaria vesca HOM05D008248 ORTHO05D010456 2.8e-09 66.6 93 36.6
FAN14G2120 Fragaria x ananassa HOM05D008248 ORTHO05D010456 2.8e-09 66.6 93 36.6
Dinv13277 Davidia involucrata HOM05D014922 ORTHO05D004107 1.4e-08 64.3 80 36.2
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 1.8e-08 63.9 106 32.1
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-08 63.9 104 36.5
FvH4_2g11356 Fragaria vesca HOM05D008248 ORTHO05D010456 2.4e-08 63.5 93 34.4
FAN03G2697 Fragaria x ananassa HOM05D008248 ORTHO05D010456 2.4e-08 63.5 93 34.4
FAN16G1353 Fragaria x ananassa HOM05D008248 ORTHO05D010456 2.4e-08 63.5 93 34.4
FAN02G4042 Fragaria x ananassa HOM05D008248 ORTHO05D010456 3.1e-08 63.2 93 34.4
Dinv11566 Davidia involucrata HOM05D008850 ORTHO05D004107 4.0e-08 62.8 103 31.1
FAN24G0435 Fragaria x ananassa HOM05D008813 ORTHO05D010456 4.0e-08 62.8 102 31.4
FvH4_3g31622 Fragaria vesca HOM05D008248 ORTHO05D010456 9.0e-08 61.6 85 36.5
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.0e-08 61.6 103 32.0
FAN19G0254 Fragaria x ananassa HOM05D047127 ORTHO05D004107 1.2e-07 61.2 128 30.5
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-07 61.2 130 27.7
DCAR_010341 Daucus carota HOM05D023779 ORTHO05D004107 1.5e-07 60.8 41 65.9
FvH4_1g09981 Fragaria vesca HOM05D000017 ORTHO05D010456 1.5e-07 60.8 93 33.3
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.5e-07 60.8 130 26.9
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-07 60.5 95 33.7
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-07 60.5 95 33.7
RcHm_v2.0_Chr5g0079631 Rosa chinensis HOM05D008813 ORTHO05D010456 2.6e-07 60.1 107 32.7
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 3.4e-07 59.7 106 29.2
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.5e-07 59.3 103 31.1
RcHm_v2.0_Chr1g0352511 Rosa chinensis HOM05D000017 ORTHO05D000013 5.8e-07 58.9 124 29.0
SGA_v2.0_scaffold57G20302 Striga asiatica HOM05D017547 ORTHO05D014211 7.6e-07 58.5 122 31.1
FvH4_2g00550 Fragaria vesca HOM05D000005 ORTHO05D000012 1.3e-06 57.8 102 30.4
Rhsim07G0242400 Rhododendron simsii HOM05D000070 ORTHO05D003315 2.2e-06 57.0 127 28.3
Rhsim07G0243000 Rhododendron simsii HOM05D000070 ORTHO05D003315 2.2e-06 57.0 127 28.3
FAN14G1231 Fragaria x ananassa HOM05D008248 ORTHO05D010456 2.9e-06 56.6 85 32.9
FAN19G2017 Fragaria x ananassa HOM05D008813 ORTHO05D010456 2.9e-06 56.6 92 29.3
Rhsim07G0255600 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.9e-06 56.6 129 27.1
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 3.8e-06 56.2 142 28.9
Rhsim09G0050000 Rhododendron simsii HOM05D003191 ORTHO05D003656 3.8e-06 56.2 101 32.7
Migut.O00430 Erythranthe guttata HOM05D016084 ORTHO05D014211 4.9e-06 55.8 114 28.9
HanXRQChr05g0162391 Helianthus annuus HOM05D000017 ORTHO05D000013 4.9e-06 55.8 137 27.0
Rhsim07G0151200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.9e-06 55.8 128 32.0
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.9e-06 55.8 108 33.3


User provided reference genes

Program Settings