Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012507 Daucus carota HOM05D000179 ORTHO05D000107 1.3e-177 626.3 339 100.0
DCAR_002702 Daucus carota HOM05D000179 ORTHO05D000107 1.1e-38 164.9 292 46.2
Dinv32885 Davidia involucrata HOM05D000179 ORTHO05D000107 5.7e-27 125.9 300 37.3
Dinv22503 Davidia involucrata HOM05D000179 ORTHO05D000107 1.1e-25 121.7 308 36.0
Duzib211G0150 Durio zibethinus HOM05D000179 ORTHO05D000107 5.4e-25 119.4 303 38.3
Nn1g02458 Nelumbo nucifera HOM05D000179 ORTHO05D000107 1.3e-23 114.8 320 34.1
GSVIVG01003119001 Vitis vinifera HOM05D000179 ORTHO05D000107 3.3e-22 110.2 401 31.2
Duzib133G0638 Durio zibethinus HOM05D000179 ORTHO05D000107 5.5e-22 109.4 299 34.8
Sabra05G0164400 Salix brachista HOM05D000179 ORTHO05D000107 9.5e-22 108.6 320 33.8
Actinidia19961 Actinidia chinensis HOM05D000179 ORTHO05D000107 2.1e-21 107.5 303 40.6
Potri.005G215100 Populus trichocarpa HOM05D000179 ORTHO05D000107 3.6e-21 106.7 319 33.5
Duzib138G1256 Durio zibethinus HOM05D000179 ORTHO05D000107 4.7e-21 106.3 306 36.6
Manes.05G081800 Manihot esculenta HOM05D000179 ORTHO05D000107 6.1e-21 105.9 311 36.7
TAR365G0388 Trochodendron aralioides HOM05D000179 ORTHO05D000107 8.0e-21 105.5 318 34.0
Actinidia24923 Actinidia chinensis HOM05D000179 ORTHO05D000107 1.0e-20 105.1 286 36.4
CSS0000745 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 1.4e-20 104.8 325 34.2
TAR636G0240 Trochodendron aralioides HOM05D000179 ORTHO05D000107 1.4e-20 104.8 316 34.5
TPR.G34885 Trifolium pratense HOM05D000179 ORTHO05D000107 3.0e-20 103.6 311 32.5
Manes.01G204100 Manihot esculenta HOM05D000179 ORTHO05D000107 6.8e-20 102.4 318 35.2
Ciclev10019959m.g Citrus clementina HOM05D000179 ORTHO05D000107 8.9e-20 102.1 323 31.9
Thecc.01G271700 Theobroma cacao HOM05D000179 ORTHO05D000107 1.2e-19 101.7 310 36.8
Oeu025765.1 Olea europaea HOM05D000179 ORTHO05D000107 1.5e-19 101.3 285 36.1
Phvul.001G154800 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 7.5e-19 99.0 316 32.6
FvH4_2g22950 Fragaria vesca HOM05D000179 ORTHO05D000107 1.7e-18 97.8 299 33.4
FAN20G1262 Fragaria x ananassa HOM05D000179 ORTHO05D000107 2.2e-18 97.4 299 32.8
Nitab4.5_0000459g0080 Nicotiana tabacum HOM05D000179 ORTHO05D000107 2.2e-18 97.4 327 32.4
RcHm_v2.0_Chr6g0289921 Rosa chinensis HOM05D000179 ORTHO05D000107 2.2e-18 97.4 302 33.1
TWI12G1078 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 2.2e-18 97.4 297 36.0
CSS0028952 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 2.8e-18 97.1 161 42.9
Gohir.A11G125500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.8e-18 97.1 303 33.0
Sc05g0001290 Simmondsia chinensis HOM05D000179 ORTHO05D000107 4.9e-18 96.3 320 33.4
Nitab4.5_0004115g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 6.3e-18 95.9 328 34.8
Eucgr.B01471 Eucalyptus grandis HOM05D000179 ORTHO05D000107 1.1e-17 95.1 314 30.9
Gohir.D12G002500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.4e-17 94.7 292 36.3
Gorai.008G002200 Gossypium raimondii HOM05D000179 ORTHO05D000107 1.8e-17 94.4 292 35.6
FAN24G3243 Fragaria x ananassa HOM05D000179 ORTHO05D000107 3.2e-17 93.6 299 32.8
Gorai.007G139800 Gossypium raimondii HOM05D000179 ORTHO05D000107 3.2e-17 93.6 303 32.3
Aqoxy2G03463 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 4.1e-17 93.2 332 29.8
Gohir.D11G130800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 4.1e-17 93.2 303 32.0
Lalb_Chr21g0306341 Lupinus albus HOM05D000179 ORTHO05D000107 4.1e-17 93.2 321 31.5
Potri.002G048000 Populus trichocarpa HOM05D000179 ORTHO05D000107 4.1e-17 93.2 317 31.9
HanXRQChr01g0005621 Helianthus annuus HOM05D000179 ORTHO05D000107 5.4e-17 92.8 318 34.0
MD11G1278800 Malus domestica HOM05D000179 ORTHO05D000107 5.4e-17 92.8 317 34.7
Lsat_1_v5_gn_5_185501 Lactuca sativa HOM05D000179 ORTHO05D000107 7.0e-17 92.4 322 32.0
MD03G1258200 Malus domestica HOM05D000179 ORTHO05D000107 7.0e-17 92.4 304 32.6
Gohir.A12G002800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 9.2e-17 92.0 292 33.2
Prupe.8G234800 Prunus persica HOM05D000179 ORTHO05D000107 9.2e-17 92.0 319 31.3
Rhsim01G0272100 Rhododendron simsii HOM05D000179 ORTHO05D000064 9.2e-17 92.0 303 38.3
Sabra02G0039200 Salix brachista HOM05D000179 ORTHO05D000107 9.2e-17 92.0 321 32.7
Sed0017240 Sechium edule HOM05D000179 ORTHO05D000107 9.2e-17 92.0 266 34.6
FAN27G2274 Fragaria x ananassa HOM05D000179 ORTHO05D000107 1.6e-16 91.3 305 33.4
ClCG09G007400 Citrullus lanatus HOM05D000179 ORTHO05D000107 2.7e-16 90.5 346 33.2
Hma1.2p1_0172F.1_g076010 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 2.7e-16 90.5 289 38.8
FAN15G1122 Fragaria x ananassa HOM05D000179 ORTHO05D000107 3.5e-16 90.1 299 32.4
Lj1A55G20 Lonicera japonica HOM05D000179 ORTHO05D000107 3.5e-16 90.1 421 30.4
MSTRG.12550 Avicennia marina HOM05D000179 ORTHO05D000107 4.5e-16 89.7 298 33.6
Peaxi162Scf00259g00513 Petunia axillaris HOM05D000179 ORTHO05D000107 4.5e-16 89.7 313 33.9
CANSAT25G0389 Cannabis sativa HOM05D000179 ORTHO05D000107 5.9e-16 89.4 330 32.7
Gohir.A08G064000 Gossypium hirsutum HOM05D000179 ORTHO05D000107 7.8e-16 89.0 301 35.9
Phvul.007G174900 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 1.0e-15 88.6 304 33.6
VMungo1383G2029 Vigna mungo HOM05D000179 ORTHO05D000107 1.0e-15 88.6 312 32.7
ECA248G0822 Erigeron canadensis HOM05D000179 ORTHO05D000107 1.7e-15 87.8 291 32.3
vmacro14888 Vaccinium macrocarpon HOM05D000179 ORTHO05D000107 1.7e-15 87.8 314 39.2
Actinidia21142 Actinidia chinensis HOM05D000179 ORTHO05D000107 5.0e-15 86.3 237 35.9
arahy.Tifrunner.gnm1.ann1.KA762Q Arachis hypogaea HOM05D000179 ORTHO05D000107 8.6e-15 85.5 332 28.3
CiPaw.08G109700 Carya illinoinensis HOM05D000179 ORTHO05D000107 8.6e-15 85.5 333 30.9
Cc01_g19010 Coffea canephora HOM05D000179 ORTHO05D000107 8.6e-15 85.5 323 35.3
Psat6g058520 Pisum sativum HOM05D000179 ORTHO05D000107 8.6e-15 85.5 296 32.1
TAR633G1320 Trochodendron aralioides HOM05D000179 ORTHO05D000107 8.6e-15 85.5 301 29.9
MSTRG.17462 Avicennia marina HOM05D000179 ORTHO05D000107 1.1e-14 85.1 296 32.8
Atru.chr5.1520 Acer truncatum HOM05D000179 ORTHO05D000107 1.9e-14 84.3 403 29.5
Gohir.D08G072500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.9e-14 84.3 301 33.2
QL12p042256 Quercus lobata HOM05D000179 ORTHO05D000107 1.9e-14 84.3 364 32.1
Sed0000186 Sechium edule HOM05D000179 ORTHO05D000107 1.9e-14 84.3 331 33.5
CiPaw.07G086900 Carya illinoinensis HOM05D000179 ORTHO05D000107 2.5e-14 84.0 333 29.4
Gorai.004G076800 Gossypium raimondii HOM05D000179 ORTHO05D000107 2.5e-14 84.0 300 33.3
EL10Ac5g10493 Beta vulgaris HOM05D000179 ORTHO05D000107 3.3e-14 83.6 310 29.7
Lj5g0021439 Lotus japonicus HOM05D000179 ORTHO05D000107 5.6e-14 82.8 308 31.5
Cfa006201 Carpinus fangiana HOM05D000179 ORTHO05D000107 9.5e-14 82.0 417 27.6
CsaV3_7G027880 Cucumis sativus L. HOM05D000179 ORTHO05D000107 9.5e-14 82.0 343 28.6
arahy.Tifrunner.gnm1.ann1.9KUV83 Arachis hypogaea HOM05D000179 ORTHO05D000107 1.2e-13 81.6 334 28.7
Nn6g34168 Nelumbo nucifera HOM05D000179 ORTHO05D000107 1.2e-13 81.6 287 32.4
VMungo0720G1299 Vigna mungo HOM05D000179 ORTHO05D000107 3.6e-13 80.1 311 31.5
Glyma.10G029700 Glycine max HOM05D000179 ORTHO05D000107 8.0e-13 79.0 328 30.8
CAN.G433.5 Capsicum annuum HOM05D000179 ORTHO05D000107 1.0e-12 78.6 337 31.8
Glyma.03G157432 Glycine max HOM05D000179 ORTHO05D000107 1.0e-12 78.6 323 32.2
Lalb_Chr06g0162791 Lupinus albus HOM05D000179 ORTHO05D000107 1.0e-12 78.6 335 31.0
TWI18G1044 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 1.0e-12 78.6 272 30.9
Oeu014739.1 Olea europaea HOM05D000179 ORTHO05D000107 1.8e-12 77.8 288 29.9
Glyma.19G159600 Glycine max HOM05D000179 ORTHO05D000107 2.3e-12 77.4 316 30.1
PGSC0003DMG400019342 Solanum tuberosum HOM05D000179 ORTHO05D000107 3.1e-12 77.0 254 32.3
COL.COLO4_09188 Corchorus olitorius HOM05D000179 ORTHO05D000107 4.0e-12 76.6 294 30.6
MELO3C015806.2 Cucumis melo HOM05D000179 ORTHO05D000107 8.9e-12 75.5 279 33.7
AUR62011972 Chenopodium quinoa HOM05D000179 ORTHO05D000107 2.0e-11 74.3 292 32.2
Glyma.02G144400 Glycine max HOM05D000179 ORTHO05D000107 4.4e-11 73.2 257 32.3
Migut.D00357 Erythranthe guttata HOM05D000179 ORTHO05D000107 1.7e-10 71.2 238 33.6
Solyc09g065670.3 Solanum lycopersicum HOM05D000179 ORTHO05D000107 2.2e-10 70.9 247 29.6
Lj2A1165G50 Lonicera japonica HOM05D000179 ORTHO05D000107 3.7e-10 70.1 367 27.8
Cpa.g.sc52.117 Carica papaya HOM05D000179 ORTHO05D000107 4.9e-10 69.7 303 31.7
Sopen09g027420 Solanum pennellii HOM05D000179 ORTHO05D000107 8.3e-10 68.9 247 29.6
ATR0665G536 Amborella trichopoda HOM05D000179 ORTHO05D000107 1.1e-09 68.6 231 31.2
Oeu028463.1 Olea europaea HOM05D000179 ORTHO05D000107 1.9e-09 67.8 157 40.8
Ah.02g111300 Amaranthus hybridus HOM05D000179 ORTHO05D000064 3.2e-09 67.0 303 30.0
CDE06G1608 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 4.1e-09 66.6 290 30.0
Duzib235G0039 Durio zibethinus HOM05D000179 ORTHO05D000107 9.2e-09 65.5 203 34.0
Medtr8g017210 Medicago truncatula HOM05D000179 ORTHO05D000107 9.2e-09 65.5 223 37.7
TPR.G19279 Trifolium pratense HOM05D000179 ORTHO05D000107 9.2e-09 65.5 199 34.7
ClCG07G013780 Citrullus lanatus HOM05D000179 ORTHO05D000107 1.6e-08 64.7 209 35.4
Carub.0001s0296 Capsella rubella HOM05D000179 ORTHO05D000107 2.0e-08 64.3 314 30.6
MBI04_g27914_MAGBIO Magnolia biondii HOM05D000179 ORTHO05D000107 3.5e-08 63.5 271 29.5
PSO384G3854 Papaver somniferum HOM05D000179 ORTHO05D000107 3.5e-08 63.5 317 26.5
Sed0025048 Sechium edule HOM05D000179 ORTHO05D000107 1.0e-07 62.0 193 34.7
Cpa.g.sc25.46 Carica papaya HOM05D000179 ORTHO05D000107 1.3e-07 61.6 215 33.0
Haze_23885 Corylus avellana HOM05D000179 ORTHO05D000107 1.3e-07 61.6 223 30.5
Phvul.005G099800 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 1.3e-07 61.6 284 27.1
vmacro18780 Vaccinium macrocarpon HOM05D000179 ORTHO05D000107 1.7e-07 61.2 214 32.7
CDE07G0798 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 2.3e-07 60.8 260 30.4
Glyma.13G293800 Glycine max HOM05D000179 ORTHO05D000107 2.3e-07 60.8 216 28.7
Sed0013448 Sechium edule HOM05D000179 ORTHO05D000107 2.3e-07 60.8 214 32.2
CiPaw.04G129300 Carya illinoinensis HOM05D000179 ORTHO05D000107 3.0e-07 60.5 200 34.5
PGR044G2027 Punica granatum HOM05D000179 ORTHO05D000107 3.0e-07 60.5 250 30.0
CSS0027321 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 3.9e-07 60.1 204 31.9
Duzib160G0046 Durio zibethinus HOM05D000179 ORTHO05D000107 3.9e-07 60.1 207 35.3
Peaxi162Scf00845g00005 Petunia axillaris HOM05D000179 ORTHO05D000107 3.9e-07 60.1 205 30.2
QL05p012055 Quercus lobata HOM05D000179 ORTHO05D000107 3.9e-07 60.1 244 28.7
Gorai.011G064700 Gossypium raimondii HOM05D000179 ORTHO05D000107 5.0e-07 59.7 238 30.3
Peaxi162Scf00038g01650 Petunia axillaris HOM05D000179 ORTHO05D000107 5.0e-07 59.7 198 34.8
Actinidia21767 Actinidia chinensis HOM05D000179 ORTHO05D000107 6.6e-07 59.3 192 33.9
CDE10G0820 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 6.6e-07 59.3 62 48.4
Lalb_Chr01g0005051 Lupinus albus HOM05D000179 ORTHO05D000107 6.6e-07 59.3 230 33.0
Nitab4.5_0022126g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 6.6e-07 59.3 209 30.6
Aqoxy4G00602 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 8.6e-07 58.9 235 28.9
PGR142G2299 Punica granatum HOM05D000179 ORTHO05D000107 8.6e-07 58.9 246 29.7
Sp5g16040 Schrenkiella parvula HOM05D000179 ORTHO05D000107 8.6e-07 58.9 251 31.5
VMungo0331G1822 Vigna mungo HOM05D000179 ORTHO05D000107 8.6e-07 58.9 202 37.6
Actinidia21061 Actinidia chinensis HOM05D000179 ORTHO05D000107 1.1e-06 58.5 246 29.3
CiPaw.03G182500 Carya illinoinensis HOM05D000179 ORTHO05D000107 1.1e-06 58.5 209 30.6
AUR62040055 Chenopodium quinoa HOM05D000179 ORTHO05D000107 1.1e-06 58.5 223 28.7
DCAR_012403 Daucus carota HOM05D000179 ORTHO05D000107 1.1e-06 58.5 210 30.0
Sp1g02700 Schrenkiella parvula HOM05D000179 ORTHO05D000107 1.1e-06 58.5 234 27.4
VMungo1080G0780 Vigna mungo HOM05D000179 ORTHO05D000107 1.1e-06 58.5 217 28.6
BcaB05g23451 Brassica carinata HOM05D000179 ORTHO05D000107 1.5e-06 58.2 255 30.2
Glyma.12G207200 Glycine max HOM05D000179 ORTHO05D000107 1.5e-06 58.2 208 33.7
Lalb_Chr14g0367181 Lupinus albus HOM05D000179 ORTHO05D000107 1.5e-06 58.2 251 27.1
Medtr2g099990 Medicago truncatula HOM05D000179 ORTHO05D000107 1.5e-06 58.2 195 30.3
Psat4g188200 Pisum sativum HOM05D000179 ORTHO05D000107 1.5e-06 58.2 194 35.1
Ca_09728_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 1.9e-06 57.8 260 27.3
TPR.G14263 Trifolium pratense HOM05D000179 ORTHO05D000107 1.9e-06 57.8 271 30.6
Ca_11462_v3 Cicer arietinum L. HOM05D000179 ORTHO05D000107 2.5e-06 57.4 202 29.7
Medtr2g090745 Medicago truncatula HOM05D000179 ORTHO05D000107 2.5e-06 57.4 206 32.0
Phvul.007G020900 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 2.5e-06 57.4 227 26.9
Solyc07g053570.4 Solanum lycopersicum HOM05D000179 ORTHO05D000107 2.5e-06 57.4 231 31.2
Aqoxy7G04022 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 3.3e-06 57.0 202 29.2
Hma1.2p1_0388F.1_g142420 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 3.3e-06 57.0 200 33.5
Hma1.2p1_2617F.1_g325516 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 3.3e-06 57.0 200 33.5
Gohir.D10G060400 Gossypium hirsutum HOM05D000179 ORTHO05D000107 4.3e-06 56.6 238 29.4
MD09G1192300 Malus domestica HOM05D000179 ORTHO05D000107 4.3e-06 56.6 194 32.5
CSS0028330 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 5.6e-06 56.2 73 49.3
CiPaw.01G224200 Carya illinoinensis HOM05D000179 ORTHO05D000107 5.6e-06 56.2 212 30.2
Dinv30372 Davidia involucrata HOM05D000179 ORTHO05D000107 5.6e-06 56.2 194 33.0
Gohir.A05G134900 Gossypium hirsutum HOM05D000179 ORTHO05D000107 5.6e-06 56.2 202 36.1
Hund20839 Selenicereus undatus HOM05D000179 ORTHO05D000107 5.6e-06 56.2 231 29.4
Gohir.A10G058700 Gossypium hirsutum HOM05D000179 ORTHO05D000107 7.3e-06 55.8 238 29.8
Rhsim08G0234300 Rhododendron simsii HOM05D000179 ORTHO05D000107 7.3e-06 55.8 197 32.5
MSTRG.22576 Avicennia marina HOM05D000179 ORTHO05D000107 9.5e-06 55.5 206 31.6
BcaC05g24503 Brassica carinata HOM05D000179 ORTHO05D000107 9.5e-06 55.5 75 45.3
A10p02370 Brassica napus HOM05D000179 ORTHO05D000107 9.5e-06 55.5 220 34.1
Thhalv10009734m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 9.5e-06 55.5 301 27.2
HanXRQChr05g0140401 Helianthus annuus HOM05D000179 ORTHO05D000107 9.5e-06 55.5 216 29.6
MD17G1186000 Malus domestica HOM05D000179 ORTHO05D000107 9.5e-06 55.5 192 33.9
TAR626G1149 Trochodendron aralioides HOM05D000179 ORTHO05D000107 9.5e-06 55.5 210 30.0


User provided reference genes

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