Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012455 Daucus carota HOM05D002930 ORTHO05D003283 1.3e-177 626.3 315 100.0
Dinv11268 Davidia involucrata HOM05D002930 ORTHO05D003283 3.3e-109 399.1 317 64.0
CSS0023451 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 2.8e-108 396.0 317 63.4
Rhsim01G0277700 Rhododendron simsii HOM05D002930 ORTHO05D003283 1.0e-107 394.0 318 63.5
Actinidia21090 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.8e-107 393.3 318 63.2
QL12p022973 Quercus lobata HOM05D002930 ORTHO05D003283 5.2e-107 391.7 317 63.7
Lj1A43T58 Lonicera japonica HOM05D002930 ORTHO05D003283 2.2e-105 386.3 339 61.9
GSVIVG01011059001 Vitis vinifera HOM05D002930 ORTHO05D003283 8.3e-105 384.4 322 61.8
Cfa006078 Carpinus fangiana HOM05D002930 ORTHO05D003283 5.4e-104 381.7 317 62.5
Lsat_1_v5_gn_8_55460 Lactuca sativa HOM05D002930 ORTHO05D003283 4.6e-103 378.6 316 59.8
Atru.chr5.1328 Acer truncatum HOM05D002930 ORTHO05D003283 1.5e-101 373.6 324 61.1
Prupe.8G248000 Prunus persica HOM05D002930 ORTHO05D003283 1.6e-100 370.2 318 61.3
DCAR_018381 Daucus carota HOM05D002930 ORTHO05D003283 2.8e-100 369.4 239 79.1
ECA236G2879 Erigeron canadensis HOM05D002930 ORTHO05D003283 2.3e-99 366.3 316 58.9
Haze_04772 Corylus avellana HOM05D002930 ORTHO05D003283 4.0e-99 365.5 343 58.9
Thecc.01G286000 Theobroma cacao HOM05D002930 ORTHO05D003283 5.2e-99 365.2 317 62.1
vmacro14944 Vaccinium macrocarpon HOM05D002930 ORTHO05D003283 1.2e-98 364.0 356 55.3
TWI59G1251 Tripterygium wilfordii HOM05D002930 ORTHO05D003283 4.4e-98 362.1 314 59.9
Gorai.004G215100 Gossypium raimondii HOM05D002930 ORTHO05D003283 7.5e-98 361.3 317 60.9
Peaxi162Scf00941g00113 Petunia axillaris HOM05D002930 ORTHO05D003283 7.5e-98 361.3 315 57.5
CsaV3_7G028480 Cucumis sativus L. HOM05D002930 ORTHO05D003283 1.3e-97 360.5 318 58.8
Migut.N02138 Erythranthe guttata HOM05D002930 ORTHO05D003283 1.7e-97 360.1 316 57.6
SalBow6G0735 Salvia bowleyana HOM05D002930 ORTHO05D003283 1.7e-97 360.1 315 58.7
GSVIVG01022038001 Vitis vinifera HOM05D002930 ORTHO05D003283 1.7e-97 360.1 318 59.4
FAN27G1593 Fragaria x ananassa HOM05D002930 ORTHO05D003283 2.9e-97 359.4 319 58.6
Potri.014G137200 Populus trichocarpa HOM05D002930 ORTHO05D003283 3.7e-97 359.0 318 59.7
FvH4_2g24180 Fragaria vesca HOM05D002930 ORTHO05D003283 4.9e-97 358.6 319 58.3
FAN24G0623 Fragaria x ananassa HOM05D002930 ORTHO05D003283 4.9e-97 358.6 319 58.3
MELO3C015874.2 Cucumis melo HOM05D002930 ORTHO05D003283 6.4e-97 358.2 318 58.2
MD03G1271800 Malus domestica HOM05D002930 ORTHO05D003283 8.3e-97 357.8 318 58.5
Gohir.A11G119600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-96 357.1 317 60.3
Gorai.007G133300 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.4e-96 357.1 317 60.3
Lj5g0012178 Lotus japonicus HOM05D002930 ORTHO05D003283 1.9e-96 356.7 317 57.7
Sed0017862 Sechium edule HOM05D002930 ORTHO05D003283 1.9e-96 356.7 318 56.9
Gohir.D11G124400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.4e-96 356.3 317 60.3
Phvul.007G168500 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 3.2e-96 355.9 317 58.7
Glyma.10G023700 Glycine max HOM05D002930 ORTHO05D003283 4.1e-96 355.5 317 59.3
ClCG09G006750 Citrullus lanatus HOM05D002930 ORTHO05D003283 5.4e-96 355.1 318 58.2
Nn3g21179 Nelumbo nucifera HOM05D002930 ORTHO05D003283 5.4e-96 355.1 317 57.7
SalBow3G3307 Salvia bowleyana HOM05D002930 ORTHO05D003283 5.4e-96 355.1 301 59.5
HanXRQChr04g0117981 Helianthus annuus HOM05D002930 ORTHO05D003283 7.0e-96 354.8 316 56.3
Lalb_Chr21g0306621 Lupinus albus HOM05D002930 ORTHO05D003283 1.6e-95 353.6 317 58.4
RcHm_v2.0_Chr6g0291991 Rosa chinensis HOM05D002930 ORTHO05D003283 3.5e-95 352.4 319 58.9
Glyma.02G150200 Glycine max HOM05D002930 ORTHO05D003283 4.6e-95 352.1 317 58.7
MD11G1292400 Malus domestica HOM05D002930 ORTHO05D003283 6.0e-95 351.7 316 59.2
MSTRG.17432 Avicennia marina HOM05D002930 ORTHO05D003283 1.3e-94 350.5 323 55.1
EL10Ac7g17191 Beta vulgaris HOM05D002930 ORTHO05D003283 1.3e-94 350.5 318 56.3
SGA_v2.0_scaffold172G39040 Striga asiatica HOM05D002930 ORTHO05D003283 1.7e-94 350.1 314 55.7
Oeu047489.1 Olea europaea HOM05D002930 ORTHO05D003283 5.0e-94 348.6 315 57.1
CSS0004978 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D003283 1.1e-93 347.4 316 58.9
Psat6g169880 Pisum sativum HOM05D002930 ORTHO05D003283 1.5e-93 347.1 317 56.8
SGA_v2.0_scaffold11G05785 Striga asiatica HOM05D002930 ORTHO05D003283 5.6e-93 345.1 322 54.7
PSO170G5253 Papaver somniferum HOM05D002930 ORTHO05D003283 2.1e-92 343.2 314 56.1
Aqoxy2G03186 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 2.8e-92 342.8 315 55.9
TPR.G13301 Trifolium pratense HOM05D002930 ORTHO05D003283 2.8e-92 342.8 317 56.2
Sopen09g028930 Solanum pennellii HOM05D002930 ORTHO05D003283 1.1e-91 340.9 314 55.7
Thhalv10001278m.g Eutrema salsugineum HOM05D002930 ORTHO05D003283 1.4e-91 340.5 317 54.3
Duzib138G0507 Durio zibethinus HOM05D002930 ORTHO05D003283 2.3e-91 339.7 291 61.9
AL4G47650 Arabidopsis lyrata HOM05D002930 ORTHO05D003283 4.0e-91 339.0 317 54.3
Solyc09g074110.4 Solanum lycopersicum HOM05D002930 ORTHO05D003283 4.0e-91 339.0 314 55.4
PSO302G0276 Papaver somniferum HOM05D002930 ORTHO05D003283 5.2e-91 338.6 314 55.7
CAN.G956.11 Capsicum annuum HOM05D002930 ORTHO05D003283 6.8e-91 338.2 314 54.8
CANSAT25G2793 Cannabis sativa HOM05D002930 ORTHO05D003283 8.9e-91 337.8 316 57.3
Sp4g29950 Schrenkiella parvula HOM05D002930 ORTHO05D003283 8.9e-91 337.8 317 52.7
Aa31LG1G29470 Aethionema arabicum HOM05D002930 ORTHO05D003283 1.5e-90 337.0 321 54.2
CANSAT54G0439 Cannabis sativa HOM05D002930 ORTHO05D003283 2.6e-90 336.3 318 56.0
AT2G48060 Arabidopsis thaliana HOM05D002930 ORTHO05D003283 3.4e-90 335.9 317 53.3
Carub.0004s3076 Capsella rubella HOM05D002930 ORTHO05D003283 3.4e-90 335.9 317 53.3
PGR119G1041 Punica granatum HOM05D002930 ORTHO05D003283 4.4e-90 335.5 315 57.8
THA.LOC104802222 Tarenaya hassleriana HOM05D002930 ORTHO05D003283 1.3e-89 334.0 317 54.6
Potri.005G037700 Populus trichocarpa HOM05D002930 ORTHO05D003283 1.7e-89 333.6 315 54.3
Duzib177G0642 Durio zibethinus HOM05D002930 ORTHO05D003283 2.2e-89 333.2 318 56.3
ECA247G2962 Erigeron canadensis HOM05D002930 ORTHO05D003283 2.2e-89 333.2 318 56.9
CARHR143440 Cardamine hirsuta HOM05D002930 ORTHO05D003283 1.4e-88 330.5 317 53.0
Sc05g0005220 Simmondsia chinensis HOM05D002930 ORTHO05D003283 1.4e-88 330.5 317 53.9
Eucgr.H01545 Eucalyptus grandis HOM05D002930 ORTHO05D003283 1.9e-88 330.1 317 53.9
HanXRQChr15g0466571 Helianthus annuus HOM05D002930 ORTHO05D003283 3.2e-88 329.3 317 54.6
A05p00070 Brassica napus HOM05D002930 ORTHO05D003283 4.1e-88 328.9 317 53.0
BraA05t19003Z Brassica rapa HOM05D002930 ORTHO05D003283 4.1e-88 328.9 317 53.0
Nitab4.5_0001323g0140 Nicotiana tabacum HOM05D002930 ORTHO05D003283 4.1e-88 328.9 279 59.1
ATR0626G265 Amborella trichopoda HOM05D002930 ORTHO05D003283 1.2e-87 327.4 318 54.7
Gorai.013G123400 Gossypium raimondii HOM05D002930 ORTHO05D003283 3.5e-87 325.9 318 54.7
BNapus_Darmor_BZH_scaffold_188p00030 Brassica napus HOM05D002930 ORTHO05D003283 7.8e-87 324.7 317 52.7
BolSC55t61233H Brassica oleracea HOM05D002930 ORTHO05D003283 7.8e-87 324.7 317 52.7
BcaB02g08731 Brassica carinata HOM05D002930 ORTHO05D003283 2.3e-86 323.2 318 52.2
BraA04t18952Z Brassica rapa HOM05D002930 ORTHO05D003283 2.3e-86 323.2 314 51.9
BcaC02g12557 Brassica carinata HOM05D002930 ORTHO05D003283 1.1e-85 320.9 317 52.4
BolC4t28786H Brassica oleracea HOM05D002930 ORTHO05D003283 1.1e-85 320.9 314 51.9
Sabra14G0103600 Salix brachista HOM05D002930 ORTHO05D003283 9.5e-85 317.8 393 47.3
Aqoxy211s001 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 1.2e-84 317.4 292 55.5
Aa31LG10G16860 Aethionema arabicum HOM05D002930 ORTHO05D003283 2.1e-84 316.6 317 54.6
Sabra05G0038400 Salix brachista HOM05D002930 ORTHO05D003283 3.6e-84 315.8 343 49.6
PSO210G3942 Papaver somniferum HOM05D002930 ORTHO05D003283 8.9e-83 311.2 321 51.7
Manes.09G162700 Manihot esculenta HOM05D002930 ORTHO05D003283 7.6e-82 308.1 318 50.9
Thecc.05G299700 Theobroma cacao HOM05D002930 ORTHO05D003283 6.4e-81 305.1 292 55.1
Aqoxy5G00565 Aquilegia oxysepala HOM05D002930 ORTHO05D003283 9.2e-80 301.2 317 51.7
Ah.08g212870 Amaranthus hybridus HOM05D002930 ORTHO05D003283 5.1e-78 295.4 291 53.3
HPP92_027329 Vanilla planifolia HOM05D002930 ORTHO05D003283 4.7e-76 288.9 313 49.2
Gohir.A13G106800 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.8e-75 287.0 294 51.7
Medtr7g113930 Medicago truncatula HOM05D002930 ORTHO05D003283 4.0e-75 285.8 322 46.6
HPP92_017200 Vanilla planifolia HOM05D002930 ORTHO05D003283 9.0e-75 284.6 313 48.9
Zm00001eb131990 Zea mays HOM05D002930 ORTHO05D003283 2.6e-74 283.1 283 51.9
TPR.G33213 Trifolium pratense HOM05D002930 ORTHO05D003283 7.6e-74 281.6 322 46.9
Glyma.19G238300 Glycine max HOM05D002930 ORTHO05D003283 3.8e-73 279.3 322 46.6
Psat3g009520 Pisum sativum HOM05D002930 ORTHO05D003283 1.1e-72 277.7 322 45.7
Gohir.D13G110101 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.4e-72 277.3 285 54.0
PGR083G0736 Punica granatum HOM05D002930 ORTHO05D003283 1.3e-70 270.8 325 46.5
Lsat_1_v5_gn_9_1821 Lactuca sativa HOM05D002930 ORTHO05D003283 4.0e-67 259.2 282 51.1
Cc02_g32570 Coffea canephora HOM05D002930 ORTHO05D003283 3.4e-66 256.1 325 43.7
Eucgr.B02004 Eucalyptus grandis HOM05D002930 ORTHO05D003283 5.8e-66 255.4 268 50.7
Lalb_Chr04g0260851 Lupinus albus HOM05D002930 ORTHO05D003283 4.9e-65 252.3 281 46.6
CiPaw.07G095900 Carya illinoinensis HOM05D002930 ORTHO05D003283 6.0e-63 245.4 279 50.5
Medtr1g089760 Medicago truncatula HOM05D002930 ORTHO05D003283 2.3e-62 243.4 180 65.6
Nitab4.5_0002927g0030 Nicotiana tabacum HOM05D002930 ORTHO05D003283 1.9e-61 240.4 296 45.6
Ah.04g159840 Amaranthus hybridus HOM05D002930 ORTHO05D003283 3.7e-60 236.1 272 46.3
Actinidia05730 Actinidia chinensis HOM05D002930 ORTHO05D003283 1.5e-58 230.7 312 44.9
MBI19_g21638_MAGBIO Magnolia biondii HOM05D002930 ORTHO05D003283 1.9e-56 223.8 312 42.9
Lj1g0027310 Lotus japonicus HOM05D002930 ORTHO05D003283 1.1e-51 208.0 178 55.6
AUR62033688 Chenopodium quinoa HOM05D002930 ORTHO05D003283 1.9e-48 197.2 302 39.4
Gohir.D05G174300 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.9e-41 173.3 167 55.1
CDE08G1131 Ceratophyllum demersum HOM05D002930 ORTHO05D003283 1.5e-37 161.0 162 51.2
Mapoly0023s0171 Marchantia polymorpha HOM05D002930 ORTHO05D003283 1.1e-35 154.8 343 30.9
Pp3c9_13300 Physcomitrium patens HOM05D002930 ORTHO05D003283 6.9e-35 152.1 330 31.2
Gohir.A08G185020 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.0e-33 148.3 111 67.6
Gorai.012G158000 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.0e-33 146.0 160 50.6
Gohir.D02G096000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.9e-32 144.1 111 66.7
Gohir.D10G213350 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.9e-32 144.1 111 66.7
Gorai.005G109700 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.9e-32 144.1 111 65.8
Gorai.008G067700 Gossypium raimondii HOM05D002930 ORTHO05D003283 9.4e-32 141.7 110 66.4
Pp3c3_17170 Physcomitrium patens HOM05D002930 ORTHO05D003283 1.6e-31 141.0 343 29.4
FAN15G2723 Fragaria x ananassa HOM05D002930 ORTHO05D003283 3.0e-30 136.7 106 63.2
Gorai.009G179600 Gossypium raimondii HOM05D002930 ORTHO05D003283 3.9e-30 136.3 152 50.0
SHI15440 Sapria himalayana HOM05D002930 ORTHO05D003283 8.8e-30 135.2 108 61.1
Gohir.D01G034401 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.1e-29 134.8 111 63.1
AagrBONN_evm.TU.Sc2ySwM_228.583 Anthoceros agrestis HOM05D002930 ORTHO05D003283 4.4e-29 132.9 317 30.3
TAR365G0233 Trochodendron aralioides HOM05D002930 ORTHO05D003283 1.7e-28 131.0 302 34.1
Gohir.A08G185060 Gossypium hirsutum HOM05D002930 ORTHO05D003283 9.1e-27 125.2 115 57.4
Gohir.D04G169700 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.5e-24 117.1 98 58.2
arahy.Tifrunner.gnm1.ann1.MJP89X Arachis hypogaea HOM05D002930 ORTHO05D003283 1.4e-22 111.3 264 30.7
QL03p004191 Quercus lobata HOM05D002930 ORTHO05D003283 3.9e-22 109.8 111 57.7
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 3.3e-21 106.7 315 27.9
Cpa.g.sc9.130 Carica papaya HOM05D002930 ORTHO05D003283 9.7e-21 105.1 72 72.2
QL03p004772 Quercus lobata HOM05D002930 ORTHO05D003283 3.7e-20 103.2 100 58.0
unitig_744.g24487 Utricularia gibba HOM05D002930 ORTHO05D003283 4.8e-20 102.8 291 28.9
VMungo0720G1730 Vigna mungo HOM05D002930 ORTHO05D003283 8.2e-20 102.1 70 68.6
Hund05358 Selenicereus undatus HOM05D002930 ORTHO05D003283 4.1e-19 99.8 115 49.6
Dinv40246 Davidia involucrata HOM05D002930 ORTHO05D003283 1.2e-18 98.2 301 28.2
Gohir.D01G193850 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.6e-18 97.8 81 60.5
CiPaw.07G096000 Carya illinoinensis HOM05D002930 ORTHO05D003283 2.0e-18 97.4 60 76.7
Gohir.D07G104000 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.0e-17 95.1 122 47.5
Gohir.A07G059600 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.2e-17 94.0 78 61.5
Gohir.D07G116100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.2e-17 94.0 78 61.5
Gohir.D10G155925 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.2e-17 94.0 78 61.5
Gorai.013G151200 Gossypium raimondii HOM05D002930 ORTHO05D003283 2.2e-17 94.0 78 61.5
PGSC0003DMG400003808 Solanum tuberosum HOM05D002930 ORTHO05D003283 2.9e-17 93.6 112 46.4
Gohir.D04G075400 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.0e-17 92.8 78 61.5
Gorai.001G179200 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.0e-17 92.8 78 60.3
arahy.Tifrunner.gnm1.ann1.HQA39L Arachis hypogaea HOM05D002930 ORTHO05D003283 8.5e-17 92.0 125 39.2
Gorai.004G134200 Gossypium raimondii HOM05D002930 ORTHO05D003283 1.1e-16 91.7 86 58.1
Gohir.D12G152250 Gossypium hirsutum HOM05D002930 ORTHO05D003283 2.5e-16 90.5 88 56.8
Gohir.D11G053151 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.5e-16 89.4 74 62.2
Gohir.D11G258550 Gossypium hirsutum HOM05D002930 ORTHO05D003283 5.5e-16 89.4 78 57.7
Gorai.007G276800 Gossypium raimondii HOM05D002930 ORTHO05D003283 5.5e-16 89.4 78 57.7
CSS0000102 Camellia sinensis var. sinensis HOM05D002930 ORTHO05D033878 9.4e-16 88.6 119 44.5
Gohir.D02G064100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.2e-15 88.2 74 60.8
Gohir.D06G133100 Gossypium hirsutum HOM05D002930 ORTHO05D003283 1.2e-15 88.2 75 61.3
VMungo0540G0500 Vigna mungo HOM05D002930 ORTHO05D003283 6.7e-14 82.4 73 52.1
AUR62036777 Chenopodium quinoa HOM05D002930 ORTHO05D003283 6.3e-12 75.9 66 51.5
HPP92_025233 Vanilla planifolia HOM05D002930 ORTHO05D003283 2.4e-11 73.9 73 53.4
Phvul.006G095000 Phaseolus vulgaris HOM05D002930 ORTHO05D003283 5.3e-11 72.8 61 54.1
CBR_g45308 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-10 71.2 202 31.2
DCAR_022250 Daucus carota HOM05D002930 ORTHO05D003283 2.0e-10 70.9 61 52.5
VMungo0540G1535 Vigna mungo HOM05D002930 ORTHO05D003283 5.0e-09 66.2 96 39.6
Ca_09378_v3 Cicer arietinum L. HOM05D002930 ORTHO05D003283 1.5e-08 64.7 57 49.1
Manes.05G071700 Manihot esculenta HOM05D002930 ORTHO05D003283 1.6e-07 61.2 32 84.4
arahy.Tifrunner.gnm1.ann1.M1RB0X Arachis hypogaea HOM05D002930 ORTHO05D003283 1.8e-06 57.8 31 80.6
Ciclev10018445m.g Citrus clementina HOM05D002930 ORTHO05D003283 1.8e-06 57.8 31 80.6


User provided reference genes

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