Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 4.3e-188 661.4 383 100.0
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 4.0e-53 213.0 342 37.4
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 1.7e-51 207.6 352 37.8
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 3.8e-51 206.5 373 36.7
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 4.9e-51 206.1 368 36.7
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 6.4e-51 205.7 341 37.2
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 2.4e-50 203.8 331 39.0
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 5.4e-50 202.6 368 36.1
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 6.9e-45 185.7 214 45.8
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 1.2e-44 184.9 352 41.8
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 2.0e-44 184.1 381 34.1
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 2.6e-44 183.7 344 43.0
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 4.9e-43 179.5 341 34.3
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 1.1e-39 168.3 366 31.7
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 1.9e-39 167.5 341 34.3
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 4.3e-39 166.4 343 32.7
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 7.4e-39 165.6 345 30.7
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.6e-38 164.5 336 34.2
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 4.8e-38 162.9 220 40.0
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 1.8e-37 161.0 368 32.1
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 2.0e-36 157.5 160 49.4
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 2.6e-36 157.1 328 35.1
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.2e-35 154.1 343 31.5
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.2e-35 154.1 343 31.8
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 2.2e-35 154.1 380 31.3
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 1.1e-34 151.8 299 35.1
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 9.3e-34 148.7 156 47.4
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 3.5e-33 146.7 350 30.6
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 5.7e-31 139.4 300 32.7
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 2.0e-28 131.0 378 27.2
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 1.0e-27 128.6 208 32.7
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 8.5e-27 125.6 183 42.6
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 1.1e-26 125.2 198 37.4
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.0e-24 117.1 161 39.8
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.0e-24 117.1 161 39.8
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 8.7e-24 115.5 159 39.6
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 2.5e-23 114.0 178 38.8
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 1.6e-22 111.3 165 40.0
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 2.8e-22 110.5 180 36.7
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 6.3e-22 109.4 180 37.2
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 5.3e-21 106.3 220 27.7
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 2.3e-16 90.9 125 37.6
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 3.7e-14 83.6 125 35.2
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 1.1e-13 82.0 104 40.4
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 1.8e-13 81.3 176 29.5
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 3.1e-13 80.5 125 35.2
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 4.1e-13 80.1 176 29.5
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 5.3e-13 79.7 125 30.4
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 6.9e-13 79.3 157 29.9
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 9.1e-13 79.0 125 32.0
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 7.7e-12 75.9 136 30.9
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 1.7e-11 74.7 125 31.2
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 5.0e-11 73.2 146 28.8
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 1.1e-10 72.0 125 28.8
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 9.4e-10 68.9 131 32.1
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 2.3e-08 64.3 196 26.0
PGR119G0138 Punica granatum HOM05D008757 ORTHO05D010583 3.3e-07 60.5 285 22.5
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 8.2e-06 55.8 150 22.7


User provided reference genes

Program Settings