Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 1.7e-64 249.2 132 100.0
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.4e-58 229.6 132 92.4
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.4e-34 149.8 129 64.3
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.4e-34 149.8 129 64.3
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 9.3e-34 147.1 134 60.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 2.7e-33 145.6 133 63.2
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 6.7e-32 141.0 134 59.0
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 8.7e-32 140.6 134 60.4
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 8.7e-32 140.6 134 60.4
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.5e-31 139.0 134 58.2
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.5e-31 139.0 134 59.7
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 4.3e-31 138.3 134 58.2
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 5.7e-31 137.9 133 55.6
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 7.4e-31 137.5 134 58.2
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.3e-30 136.7 134 57.5
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.7e-30 136.3 135 56.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 2.2e-30 136.0 135 57.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 2.8e-30 135.6 131 53.4
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 6.9e-29 131.0 133 54.1
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.5e-28 129.8 134 53.7
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.6e-28 129.0 131 54.2
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 4.5e-28 128.3 131 54.2
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.3e-27 126.7 128 53.9
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.7e-27 126.3 135 50.4
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.9e-27 125.6 112 57.1
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 2.9e-27 125.6 135 52.6
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 3.8e-27 125.2 138 51.4
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 3.8e-27 125.2 138 53.6
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 3.8e-27 125.2 100 65.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.0e-27 124.8 144 54.9
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 5.0e-27 124.8 132 50.0
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.4e-26 123.2 134 53.0
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.9e-26 122.9 120 55.0
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.5e-26 122.5 108 59.3
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 3.2e-26 122.1 87 71.3
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 3.2e-26 122.1 130 53.1
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 5.5e-26 121.3 137 52.6
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 5.5e-26 121.3 131 49.6
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 9.4e-26 120.6 134 51.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 9.4e-26 120.6 129 52.7
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.1e-25 119.4 137 52.6
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 2.1e-25 119.4 133 51.1
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 2.1e-25 119.4 133 51.1
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 2.1e-25 119.4 133 51.1
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 2.1e-25 119.4 124 51.6
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.6e-25 118.6 136 51.5
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.6e-25 118.6 98 60.2
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.6e-25 118.6 141 51.1
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 4.7e-25 118.2 134 50.7
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 4.7e-25 118.2 134 50.7
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 4.7e-25 118.2 100 57.0
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 6.1e-25 117.9 137 51.8
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 6.1e-25 117.9 133 51.1
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 6.1e-25 117.9 133 49.6
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 7.9e-25 117.5 123 52.0
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 7.9e-25 117.5 127 53.5
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 7.9e-25 117.5 136 48.5
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.0e-24 117.1 136 49.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.0e-24 117.1 134 50.7
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.0e-24 117.1 134 50.7
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.0e-24 117.1 110 59.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.0e-24 117.1 137 52.6
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.0e-24 117.1 137 52.6
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.4e-24 116.7 125 51.2
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.4e-24 116.7 132 50.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.3e-24 115.9 126 51.6
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.0e-24 115.5 125 51.2
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 3.0e-24 115.5 133 48.9
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 3.0e-24 115.5 132 48.5
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 5.1e-24 114.8 109 55.0
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 5.1e-24 114.8 131 49.6
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 5.1e-24 114.8 129 45.7
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 6.7e-24 114.4 116 52.6
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 8.8e-24 114.0 137 50.4
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 8.8e-24 114.0 132 49.2
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 1.5e-23 113.2 129 48.8
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.0e-23 112.8 136 47.8
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 2.6e-23 112.5 121 48.8
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 5.7e-23 111.3 124 51.6
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 5.7e-23 111.3 132 49.2
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 7.4e-23 110.9 129 48.1
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 7.4e-23 110.9 122 45.1
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.3e-22 110.2 125 48.8
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.3e-22 110.2 134 48.5
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.2e-22 109.4 125 45.6
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.2e-22 109.4 129 47.3
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.7e-22 108.6 140 47.9
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 3.7e-22 108.6 120 50.0
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 4.8e-22 108.2 121 50.4
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 4.8e-22 108.2 120 50.0
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.8e-21 106.3 111 50.5
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.8e-21 106.3 116 49.1
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.4e-21 105.9 130 46.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 4.1e-21 105.1 125 47.2
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.3e-21 104.8 102 51.0
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 5.3e-21 104.8 129 45.0
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.2e-20 103.6 120 47.5
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.5e-20 103.2 128 46.1
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.5e-20 103.2 125 47.2
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 2.0e-20 102.8 127 48.8
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.6e-20 102.4 100 53.0
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.3e-19 100.1 130 46.9
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.7e-19 99.8 126 43.7
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.0e-19 98.2 132 41.7
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 8.5e-19 97.4 136 44.9
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.1e-18 97.1 130 43.1
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.5e-18 95.9 132 43.2
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.5e-18 94.7 137 40.1
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.1e-17 92.8 73 58.9
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 4.7e-17 91.7 106 47.2
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.8e-16 89.7 129 36.4
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 8.8e-16 87.4 135 43.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.1e-15 87.0 111 47.7
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 5.7e-15 84.7 128 41.4
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 3.7e-14 82.0 88 58.0
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 6.3e-14 81.3 116 42.2
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 5.3e-13 78.2 70 55.7
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 9.1e-13 77.4 76 51.3
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 4.5e-12 75.1 130 33.1
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.9e-12 74.7 70 57.1
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 2.9e-11 72.4 85 41.2
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.9e-10 69.7 111 36.9
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 8.8e-08 60.8 95 36.8
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.6e-07 59.3 133 32.3


User provided reference genes

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