Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 3.3e-63 245.0 132 100.0
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 9.3e-58 226.9 132 92.4
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 8.5e-35 150.6 129 66.7
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 8.5e-35 150.6 129 66.7
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.8e-32 142.9 134 60.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 3.0e-32 142.1 133 63.9
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 5.7e-31 137.9 134 61.2
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 5.7e-31 137.9 134 61.2
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 7.4e-31 137.5 134 59.0
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.7e-30 136.3 134 59.0
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.7e-30 136.3 134 60.4
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 2.2e-30 136.0 134 59.0
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 6.3e-30 134.4 134 58.2
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 8.2e-30 134.0 134 58.2
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 8.2e-30 134.0 135 59.3
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 2.4e-29 132.5 133 55.6
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 2.4e-29 132.5 134 56.7
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 4.1e-29 131.7 135 57.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 4.1e-29 131.7 131 53.4
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.4e-28 128.6 144 57.6
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 3.4e-28 128.6 131 55.0
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.7e-27 126.3 129 53.5
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 2.2e-27 125.9 130 54.6
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.9e-27 125.6 111 61.3
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.8e-27 125.2 135 55.6
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.1e-26 123.6 134 55.2
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 1.4e-26 123.2 132 52.3
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.4e-26 123.2 128 53.9
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.4e-26 123.2 135 56.3
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.4e-26 123.2 100 67.0
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.9e-26 122.9 135 51.9
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.9e-26 122.9 101 63.4
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 2.5e-26 122.5 136 53.7
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 7.2e-26 120.9 130 54.6
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 7.2e-26 120.9 133 50.4
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 1.2e-25 120.2 87 71.3
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.2e-25 120.2 144 54.9
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.2e-25 120.2 120 55.0
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 6.1e-25 117.9 129 53.5
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 7.9e-25 117.5 134 52.2
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.0e-24 117.1 137 52.6
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.0e-24 117.1 125 54.4
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.4e-24 116.7 136 52.2
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-24 116.7 134 52.2
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-24 116.7 134 52.2
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-24 116.7 133 52.6
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.4e-24 116.7 133 52.6
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.4e-24 116.7 133 52.6
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.4e-24 116.7 124 53.2
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 1.8e-24 116.3 137 53.3
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.8e-24 116.3 134 51.5
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.8e-24 116.3 136 50.7
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 2.3e-24 115.9 125 54.4
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 3.0e-24 115.5 125 54.4
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 3.9e-24 115.2 133 52.6
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 3.9e-24 115.2 123 53.7
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 3.9e-24 115.2 100 58.0
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.9e-24 115.2 98 61.2
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.9e-24 115.2 137 51.8
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 3.9e-24 115.2 137 51.8
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 5.1e-24 114.8 115 57.4
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 6.7e-24 114.4 137 52.6
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 6.7e-24 114.4 134 51.5
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 6.7e-24 114.4 134 51.5
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 6.7e-24 114.4 132 50.0
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 6.7e-24 114.4 130 49.2
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 8.8e-24 114.0 111 60.4
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.1e-23 113.6 134 50.0
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.1e-23 113.6 132 50.8
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.1e-23 113.6 133 49.6
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.5e-23 113.2 134 53.0
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.0e-23 112.8 133 50.4
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.6e-23 112.5 129 51.9
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 3.3e-23 112.1 132 50.0
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 4.4e-23 111.7 129 48.8
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 4.4e-23 111.7 129 47.3
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 5.7e-23 111.3 109 56.0
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 7.4e-23 110.9 137 51.1
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 9.7e-23 110.5 123 52.0
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 9.7e-23 110.5 125 51.2
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.2e-22 109.4 125 48.8
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 2.2e-22 109.4 121 50.4
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 2.8e-22 109.0 123 50.4
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 2.8e-22 109.0 122 45.1
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.7e-22 108.6 129 48.8
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 4.8e-22 108.2 129 49.6
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 4.8e-22 108.2 126 50.8
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 4.8e-22 108.2 120 52.5
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.3e-22 107.8 125 50.4
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 6.3e-22 107.8 111 52.3
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.8e-21 106.3 130 50.0
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.4e-21 105.9 121 50.4
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.4e-21 105.9 137 50.4
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 4.1e-21 105.1 123 48.0
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 9.1e-21 104.0 102 52.9
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 9.1e-21 104.0 123 50.4
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 9.1e-21 104.0 111 49.5
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.2e-20 103.6 125 48.8
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.0e-20 102.8 128 47.7
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 2.0e-20 102.8 130 49.2
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 2.0e-20 102.8 126 47.6
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.6e-20 102.4 100 55.0
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 2.2e-19 99.4 132 43.9
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 2.2e-19 99.4 126 47.6
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 2.2e-19 99.4 130 46.2
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.9e-18 96.3 129 44.2
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.9e-18 96.3 137 42.3
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 5.5e-18 94.7 136 46.3
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 9.4e-18 94.0 73 63.0
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 4.7e-17 91.7 106 49.1
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 6.7e-16 87.8 111 52.3
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 1.5e-15 86.7 128 44.5
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 2.6e-15 85.9 129 36.4
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 2.8e-14 82.4 119 45.4
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.4e-13 79.3 70 58.6
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 4.1e-13 78.6 76 55.3
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 1.2e-12 77.0 116 42.2
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 2.0e-12 76.3 88 55.7
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.5e-12 75.5 70 60.0
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.7e-11 73.2 107 40.2
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.2e-11 72.8 130 33.1
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 6.5e-11 71.2 85 43.5
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.3e-08 62.8 95 38.9
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 4.4e-07 58.5 104 34.6


User provided reference genes

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