Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 1.0e-96 356.7 178 100.0
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 1.8e-56 223.0 179 64.8
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 1.6e-44 183.3 180 56.7
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 3.9e-43 178.7 181 53.6
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 1.5e-42 176.8 181 55.2
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 9.6e-42 174.1 180 53.3
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 1.6e-41 173.3 180 52.2
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 4.8e-41 171.8 180 52.8
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 8.2e-41 171.0 180 51.1
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.8e-40 169.9 182 52.2
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 4.0e-40 168.7 182 52.2
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 4.0e-40 168.7 182 52.2
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 4.0e-40 168.7 182 52.2
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 4.0e-40 168.7 179 53.1
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 1.2e-39 167.2 181 51.9
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 1.5e-39 166.8 178 51.7
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 3.4e-39 165.6 183 51.4
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 5.8e-39 164.9 186 50.5
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 7.6e-39 164.5 175 50.9
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.3e-38 163.7 181 51.4
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 1.7e-38 163.3 178 50.0
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 2.2e-38 162.9 185 53.0
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 3.8e-38 162.2 183 50.3
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 3.8e-38 162.2 181 50.3
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 3.8e-38 162.2 178 47.2
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 8.4e-38 161.0 181 49.2
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 4.2e-37 158.7 179 50.3
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 9.3e-37 157.5 173 50.9
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.2e-36 157.1 176 48.3
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 1.2e-36 157.1 176 48.3
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 2.1e-36 156.4 174 50.0
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 3.5e-36 155.6 182 50.0
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 7.9e-36 154.5 173 49.1
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 7.9e-36 154.5 179 48.6
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 7.9e-36 154.5 192 49.5
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.0e-35 154.1 176 48.9
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.3e-35 153.7 175 48.0
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 1.8e-35 153.3 179 48.0
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.8e-35 153.3 184 48.4
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 1.8e-35 153.3 167 50.9
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 3.0e-35 152.5 179 46.4
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 6.7e-35 151.4 173 48.0
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 6.7e-35 151.4 186 46.2
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 8.7e-35 151.0 184 46.7
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 8.7e-35 151.0 182 47.8
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 1.1e-34 150.6 178 46.6
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 1.1e-34 150.6 181 49.7
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 1.5e-34 150.2 188 46.3
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 1.5e-34 150.2 179 47.5
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.5e-34 150.2 186 46.8
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 1.9e-34 149.8 178 47.2
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 2.5e-34 149.4 180 47.8
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 2.5e-34 149.4 178 48.3
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 3.3e-34 149.1 175 46.9
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 4.3e-34 148.7 181 49.2
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 7.4e-34 147.9 173 47.4
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 9.7e-34 147.5 183 45.9
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 1.6e-33 146.7 180 48.3
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 1.6e-33 146.7 178 47.8
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 2.2e-33 146.4 178 48.9
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 2.8e-33 146.0 178 48.9
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 3.7e-33 145.6 182 50.5
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 4.8e-33 145.2 180 47.2
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 4.8e-33 145.2 179 47.5
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 6.3e-33 144.8 179 44.7
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 8.2e-33 144.4 179 48.0
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 1.1e-32 144.1 179 48.0
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 1.1e-32 144.1 180 47.8
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.1e-32 144.1 170 48.8
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.4e-32 143.7 175 47.4
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 1.8e-32 143.3 156 50.6
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 1.8e-32 143.3 178 47.2
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 3.1e-32 142.5 171 48.5
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 3.1e-32 142.5 178 47.8
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 4.1e-32 142.1 181 47.5
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 6.9e-32 141.4 178 47.2
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 6.9e-32 141.4 168 45.8
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 9.0e-32 141.0 182 50.0
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 9.0e-32 141.0 193 41.5
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 1.2e-31 140.6 178 46.1
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 4.5e-31 138.7 175 44.6
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 5.9e-31 138.3 182 49.5
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 1.0e-30 137.5 178 46.1
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 2.2e-30 136.3 172 44.8
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 1.4e-29 133.7 179 44.7
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 2.5e-29 132.9 178 44.9
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 2.5e-29 132.9 181 45.3
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 2.5e-29 132.9 178 46.1
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 2.5e-29 132.9 178 46.1
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 3.2e-29 132.5 178 44.9
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 4.2e-29 132.1 178 46.1
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 4.2e-29 132.1 178 44.9
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 9.3e-29 131.0 181 41.4
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 9.3e-29 131.0 169 46.2
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 1.2e-28 130.6 177 43.5
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.6e-28 130.2 184 39.7
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 2.1e-28 129.8 178 44.9
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 2.7e-28 129.4 183 41.0
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.7e-28 129.4 153 45.1
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 2.7e-28 129.4 181 45.3
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 3.6e-28 129.0 178 45.5
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 4.6e-28 128.6 179 43.0
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 6.1e-28 128.3 179 42.5
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 1.3e-27 127.1 178 43.8
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 3.0e-27 125.9 182 43.4
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 3.9e-27 125.6 180 44.4
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 5.1e-27 125.2 171 43.3
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 1.9e-26 123.2 191 41.9
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 2.5e-26 122.9 162 43.8
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 5.7e-26 121.7 181 42.5
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 1.7e-25 120.2 180 44.4
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 2.8e-25 119.4 179 41.9
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 3.7e-25 119.0 175 39.4
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 6.3e-25 118.2 180 41.7
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 6.3e-25 118.2 178 38.8
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 8.2e-25 117.9 179 40.2
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.1e-24 117.5 161 42.2
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.1e-24 117.5 179 40.8
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 1.4e-24 117.1 179 40.2
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 1.4e-24 117.1 179 40.2
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 1.8e-24 116.7 179 41.3
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 2.4e-24 116.3 179 39.7
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 2.4e-24 116.3 176 41.5
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 4.1e-24 115.5 176 41.5
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 1.5e-23 113.6 178 39.3
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 1.5e-23 113.6 178 37.6
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 2.6e-23 112.8 121 49.6
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 2.2e-22 109.8 158 42.4
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 3.8e-22 109.0 138 44.9
unitig_746.g26607 Utricularia gibba HOM05D005110 ORTHO05D006074 5.0e-22 108.6 183 40.4
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 8.5e-22 107.8 131 48.9
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 7.2e-21 104.8 203 36.9
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 4.7e-20 102.1 180 39.4
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 9.7e-18 94.4 125 47.2
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 6.9e-16 88.2 118 39.8
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 2.6e-15 86.3 110 48.2
BolC9t58287H Brassica oleracea HOM05D005110 ORTHO05D006074 5.9e-15 85.1 182 35.2
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 5.9e-15 85.1 119 41.2
Actinidia35470 Actinidia chinensis HOM05D005110 ORTHO05D006074 2.9e-14 82.8 97 46.4
Zm00001eb242880 Zea mays HOM05D005110 ORTHO05D006074 1.6e-12 77.0 187 31.6
C09p54160 Brassica napus HOM05D005110 ORTHO05D006074 2.7e-12 76.3 177 34.5
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 3.6e-12 75.9 103 46.6
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 8.0e-12 74.7 182 31.9
Os02g0535300 Oryza sativa ssp. japonica HOM05D005110 ORTHO05D006074 2.2e-09 66.6 201 30.3
TPR.G4458 Trifolium pratense HOM05D005110 ORTHO05D006074 7.0e-08 61.6 69 49.3
A10p18400 Brassica napus HOM05D005110 ORTHO05D006074 1.3e-06 57.4 62 50.0


User provided reference genes

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