Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012139 Daucus carota HOM05D007866 ORTHO05D003871 1.8e-66 255.8 130 100.0
DCAR_010424 Daucus carota HOM05D007866 ORTHO05D003871 2.8e-14 82.4 128 43.8
Atru.chr8.2088 Acer truncatum HOM05D007866 ORTHO05D003871 5.8e-12 74.7 102 47.1
CSS0047873 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 5.8e-12 74.7 115 47.0
Oeu030552.1 Olea europaea HOM05D007866 ORTHO05D003871 6.4e-11 71.2 107 46.7
Thecc.05G029400 Theobroma cacao HOM05D007866 ORTHO05D003871 6.4e-11 71.2 115 42.6
Actinidia29169 Actinidia chinensis HOM05D007866 ORTHO05D003871 1.1e-10 70.5 116 43.1
Prupe.6G264300 Prunus persica HOM05D007866 ORTHO05D003871 1.9e-10 69.7 115 46.1
MD12G1154500 Malus domestica HOM05D007866 ORTHO05D003871 4.2e-10 68.6 119 43.7
Ciclev10013493m.g Citrus clementina HOM05D007866 ORTHO05D003871 5.4e-10 68.2 100 46.0
COL.COLO4_14698 Corchorus olitorius HOM05D007866 ORTHO05D003871 5.4e-10 68.2 107 43.9
FvH4_6g12750 Fragaria vesca HOM05D007866 ORTHO05D003871 5.4e-10 68.2 96 47.9
FAN14G2102 Fragaria x ananassa HOM05D007866 ORTHO05D003871 5.4e-10 68.2 96 47.9
QL07p028342 Quercus lobata HOM05D007866 ORTHO05D003871 5.4e-10 68.2 119 43.7
Rhsim05G0199600 Rhododendron simsii HOM05D007866 ORTHO05D003871 7.1e-10 67.8 108 46.3
CiPaw.09G201000 Carya illinoinensis HOM05D007866 ORTHO05D003871 9.3e-10 67.4 99 43.4
Gohir.A09G152500 Gossypium hirsutum HOM05D007866 ORTHO05D003871 9.3e-10 67.4 115 39.1
Gohir.D09G148200 Gossypium hirsutum HOM05D007866 ORTHO05D003871 9.3e-10 67.4 115 39.1
Haze_20881 Corylus avellana HOM05D007866 ORTHO05D003871 1.6e-09 66.6 118 42.4
Haze_20890 Corylus avellana HOM05D007866 ORTHO05D003871 1.6e-09 66.6 118 42.4
FAN05G4429 Fragaria x ananassa HOM05D007866 ORTHO05D003871 2.7e-09 65.9 95 47.4
Gorai.006G169200 Gossypium raimondii HOM05D007866 ORTHO05D003871 2.7e-09 65.9 115 38.3
Sopen09g006160 Solanum pennellii HOM05D007866 ORTHO05D003871 2.7e-09 65.9 116 43.1
CSS0026310 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 3.5e-09 65.5 95 45.3
TAR633G1059 Trochodendron aralioides HOM05D007866 ORTHO05D003871 4.6e-09 65.1 95 42.1
FAN09G3925 Fragaria x ananassa HOM05D007866 ORTHO05D003871 7.8e-09 64.3 114 43.0
Gorai.002G255600 Gossypium raimondii HOM05D007866 ORTHO05D003871 7.8e-09 64.3 108 38.9
Gohir.D01G209950 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.0e-08 63.9 108 38.9
Lalb_Chr07g0193271 Lupinus albus HOM05D007866 ORTHO05D003871 1.7e-08 63.2 140 37.9
Potri.006G092200 Populus trichocarpa HOM05D007866 ORTHO05D003871 1.7e-08 63.2 111 41.4
SalBow4G1352 Salvia bowleyana HOM05D007866 ORTHO05D003871 2.3e-08 62.8 109 36.7
PGSC0003DMG400037339 Solanum tuberosum HOM05D007866 ORTHO05D003871 2.3e-08 62.8 112 42.0
Gohir.A01G221050 Gossypium hirsutum HOM05D007866 ORTHO05D003871 3.0e-08 62.4 108 37.0
Manes.09G098200 Manihot esculenta HOM05D007866 ORTHO05D003871 3.0e-08 62.4 106 40.6
RcHm_v2.0_Chr3g0464671 Rosa chinensis HOM05D007866 ORTHO05D003871 3.0e-08 62.4 116 42.2
CsaV3_4G025580 Cucumis sativus L. HOM05D007866 ORTHO05D003871 5.1e-08 61.6 108 39.8
Eucgr.B02728 Eucalyptus grandis HOM05D007866 ORTHO05D003871 8.7e-08 60.8 121 34.7
VMungo0331G0444 Vigna mungo HOM05D007866 ORTHO05D003871 8.7e-08 60.8 106 42.5
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 1.1e-07 60.5 116 41.4
Peaxi162Scf00014g00168 Petunia axillaris HOM05D007866 ORTHO05D003871 1.5e-07 60.1 109 42.2
Sabra16G0103600 Salix brachista HOM05D007866 ORTHO05D003871 1.9e-07 59.7 111 39.6
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 2.5e-07 59.3 82 41.5
Duzib128G0987 Durio zibethinus HOM05D007866 ORTHO05D003871 3.3e-07 58.9 113 37.2
MELO3C003184.2 Cucumis melo HOM05D007866 ORTHO05D003871 4.3e-07 58.5 108 40.7
ECA236G0848 Erigeron canadensis HOM05D007866 ORTHO05D003871 4.3e-07 58.5 102 38.2
Potri.016G103700 Populus trichocarpa HOM05D007866 ORTHO05D003871 4.3e-07 58.5 111 41.4
DCAR_028812 Daucus carota HOM05D007866 ORTHO05D003871 5.6e-07 58.2 151 31.8
Lj3g0011949 Lotus japonicus HOM05D007866 ORTHO05D003871 5.6e-07 58.2 120 37.5
ClCG04G007660 Citrullus lanatus HOM05D007866 ORTHO05D003871 2.1e-06 56.2 115 38.3
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 2.8e-06 55.8 71 45.1
Lsat_1_v5_gn_8_84120 Lactuca sativa HOM05D007866 ORTHO05D003871 3.6e-06 55.5 99 37.4
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 3.6e-06 55.5 84 44.0
AL70U10030 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 4.8e-06 55.1 47 57.4
CARHR083640 Cardamine hirsuta HOM05D007866 ORTHO05D003871 4.8e-06 55.1 49 55.1
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 4.8e-06 55.1 116 36.2
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 4.8e-06 55.1 101 37.6
Sed0027672 Sechium edule HOM05D007866 ORTHO05D003871 6.2e-06 54.7 86 41.9
Glyma.03G073100 Glycine max HOM05D007866 ORTHO05D003871 8.1e-06 54.3 110 41.8
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 8.1e-06 54.3 71 43.7


User provided reference genes

Program Settings