Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 4.2e-40 167.5 82 100.0
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 1.3e-14 82.8 81 59.3
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 1.8e-14 82.4 79 59.5
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 7.4e-13 77.0 69 60.9
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 9.6e-13 76.6 47 78.7
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 9.6e-13 76.6 47 76.6
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 9.6e-13 76.6 87 51.7
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 9.6e-13 76.6 87 51.7
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 1.6e-12 75.9 47 78.7
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 2.8e-12 75.1 47 76.6
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 3.7e-12 74.7 86 48.8
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 6.2e-12 73.9 48 79.2
Atru.chr8.2052 Acer truncatum HOM05D007574 ORTHO05D007552 6.2e-12 73.9 48 79.2
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 6.2e-12 73.9 81 50.6
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 6.2e-12 73.9 48 75.0
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 8.2e-12 73.6 46 76.1
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 8.2e-12 73.6 87 50.6
Lalb_Chr03g0042511 Lupinus albus HOM05D007574 ORTHO05D007552 1.8e-11 72.4 80 50.0
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 1.8e-11 72.4 84 51.2
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 4.0e-11 71.2 83 45.8
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 5.3e-11 70.9 68 57.4
Oeu001849.1 Olea europaea HOM05D007574 ORTHO05D007552 5.3e-11 70.9 74 55.4
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 6.9e-11 70.5 65 58.5
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 6.9e-11 70.5 80 46.2
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 9.0e-11 70.1 88 50.0
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 9.0e-11 70.1 77 55.8
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 1.2e-10 69.7 70 55.7
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 1.2e-10 69.7 82 51.2
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 1.5e-10 69.3 73 54.8
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 2.0e-10 68.9 78 47.4
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 2.0e-10 68.9 47 70.2
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 2.0e-10 68.9 75 53.3
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 2.6e-10 68.6 86 45.3
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 2.6e-10 68.6 79 51.9
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 2.6e-10 68.6 74 47.3
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 2.6e-10 68.6 46 71.7
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 2.6e-10 68.6 84 48.8
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 3.4e-10 68.2 65 55.4
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 4.5e-10 67.8 51 70.6
Lj1g0014408 Lotus japonicus HOM05D007574 ORTHO05D007552 4.5e-10 67.8 80 46.2
Nitab4.5_0004744g0030 Nicotiana tabacum HOM05D007574 ORTHO05D007552 4.5e-10 67.8 73 46.6
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 4.5e-10 67.8 91 48.4
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 5.8e-10 67.4 93 45.2
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 5.8e-10 67.4 47 76.6
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 7.6e-10 67.0 51 66.7
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 1.0e-09 66.6 94 45.7
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 2.2e-09 65.5 95 43.2
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.2e-09 65.5 61 55.7
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 2.9e-09 65.1 85 49.4
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 2.9e-09 65.1 87 43.7
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.9e-09 65.1 73 50.7
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 2.9e-09 65.1 73 50.7
SalBow5G2190 Salvia bowleyana HOM05D007574 ORTHO05D007552 2.9e-09 65.1 48 70.8
MELO3C009230.2 Cucumis melo HOM05D007574 ORTHO05D007552 3.8e-09 64.7 77 51.9
Glyma.18G187300 Glycine max HOM05D007574 ORTHO05D007552 3.8e-09 64.7 84 46.4
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 5.0e-09 64.3 79 50.6
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 5.0e-09 64.3 93 45.2
Medtr7g063490 Medicago truncatula HOM05D007574 ORTHO05D007552 5.0e-09 64.3 75 52.0
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 6.5e-09 63.9 82 46.3
ClCG10G021430 Citrullus lanatus HOM05D007574 ORTHO05D007552 6.5e-09 63.9 78 55.1
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 6.5e-09 63.9 48 68.8
Lj1g0012526 Lotus japonicus HOM05D007574 ORTHO05D007552 1.4e-08 62.8 80 43.8
Gohir.A04G084700 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.9e-08 62.4 67 53.7
Nitab4.5_0004598g0040 Nicotiana tabacum HOM05D007574 ORTHO05D007552 1.9e-08 62.4 88 45.5
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 3.2e-08 61.6 80 50.0
Medtr4g021330 Medicago truncatula HOM05D007574 ORTHO05D007552 4.2e-08 61.2 65 52.3
Lalb_Chr01g0022701 Lupinus albus HOM05D007574 ORTHO05D007552 7.1e-08 60.5 62 51.6
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 7.1e-08 60.5 72 52.8
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 9.3e-08 60.1 70 51.4
HPP92_019232 Vanilla planifolia HOM05D007574 ORTHO05D007552 9.3e-08 60.1 47 61.7
THA.LOC109116793 Tarenaya hassleriana HOM05D009057 ORTHO05D011698 1.6e-07 59.3 76 50.0
Glyma.07G136800 Glycine max HOM05D007574 ORTHO05D007552 2.1e-07 58.9 77 50.6
TPR.G27329 Trifolium pratense HOM05D007574 ORTHO05D007552 2.1e-07 58.9 77 48.1
Sed0004598 Sechium edule HOM05D007574 ORTHO05D007552 2.7e-07 58.5 47 66.0
Solyc10g086630.2 Solanum lycopersicum HOM05D007574 ORTHO05D007552 2.7e-07 58.5 74 45.9
Sopen10g036030 Solanum pennellii HOM05D007574 ORTHO05D007552 2.7e-07 58.5 74 45.9
CsaV3_3G034590 Cucumis sativus L. HOM05D007574 ORTHO05D007552 4.6e-07 57.8 61 57.4
PSO675G0145 Papaver somniferum HOM05D007574 ORTHO05D007552 4.6e-07 57.8 54 64.8
Migut.L01966 Erythranthe guttata HOM05D007574 ORTHO05D007552 6.1e-07 57.4 71 50.7
Manes.02G127800 Manihot esculenta HOM05D007574 ORTHO05D007552 1.0e-06 56.6 66 53.0
Thhalv10017906m.g Eutrema salsugineum HOM05D009505 ORTHO05D007552 1.3e-06 56.2 79 43.0
Os05g0456900 Oryza sativa ssp. japonica HOM05D007574 ORTHO05D007552 1.3e-06 56.2 50 54.0
Carub.0004s1969 Capsella rubella HOM05D009505 ORTHO05D007552 1.8e-06 55.8 79 40.5
Sc01g0004620 Simmondsia chinensis HOM05D007574 ORTHO05D007552 1.8e-06 55.8 84 44.0
Thecc.09G313900 Theobroma cacao HOM05D007574 ORTHO05D007552 2.3e-06 55.5 66 47.0
COL.COLO4_18585 Corchorus olitorius HOM05D007574 ORTHO05D007552 3.0e-06 55.1 66 43.9
Sp4g20120 Schrenkiella parvula HOM05D009505 ORTHO05D007552 3.9e-06 54.7 80 41.2
AL6G11310 Arabidopsis lyrata HOM05D009057 ORTHO05D011698 8.7e-06 53.5 86 40.7
Solyc09g011190.1 Solanum lycopersicum HOM05D007574 ORTHO05D007552 8.7e-06 53.5 50 54.0
Sopen09g005930 Solanum pennellii HOM05D007574 ORTHO05D007552 8.7e-06 53.5 50 54.0
PGSC0003DMG400008893 Solanum tuberosum HOM05D007574 ORTHO05D007552 8.7e-06 53.5 50 54.0


User provided reference genes

Program Settings