Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 3.5e-62 241.5 126 100.0
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 1.9e-44 182.6 133 71.4
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 6.2e-43 177.6 137 68.6
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 6.8e-42 174.1 133 68.4
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.6e-41 172.2 133 66.9
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.6e-41 172.2 133 66.9
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.7e-40 169.5 133 66.2
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.9e-40 168.7 132 65.9
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 2.9e-40 168.7 133 67.7
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 2.4e-39 165.6 135 65.2
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 4.1e-39 164.9 134 65.7
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 4.1e-39 164.9 131 67.2
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 7.1e-39 164.1 133 63.2
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 1.2e-38 163.3 134 67.9
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 1.6e-38 162.9 134 64.2
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 2.1e-38 162.5 125 68.0
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 2.7e-38 162.2 130 65.4
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 1.3e-37 159.8 136 62.5
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 2.3e-37 159.1 134 67.2
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 2.3e-37 159.1 137 61.3
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.0e-37 158.7 133 64.7
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.1e-37 157.9 133 63.9
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.1e-37 157.9 133 63.9
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 6.6e-37 157.5 124 66.1
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 6.6e-37 157.5 128 65.6
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 6.6e-37 157.5 133 63.2
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 6.6e-37 157.5 134 61.9
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 6.6e-37 157.5 137 61.3
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 8.6e-37 157.1 142 60.6
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 8.6e-37 157.1 128 64.1
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 8.6e-37 157.1 128 64.1
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 8.6e-37 157.1 124 64.5
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 1.1e-36 156.8 137 65.0
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 1.5e-36 156.4 127 63.8
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 1.5e-36 156.4 137 60.6
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 1.5e-36 156.4 136 62.5
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 3.3e-36 155.2 125 68.0
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.3e-36 155.2 133 62.4
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 3.3e-36 155.2 136 62.5
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 4.3e-36 154.8 131 61.1
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 7.3e-36 154.1 128 64.8
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 1.2e-35 153.3 126 62.7
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 2.1e-35 152.5 135 60.7
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 8.1e-35 150.6 135 59.3
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 1.4e-34 149.8 137 61.3
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 3.1e-34 148.7 128 64.1
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 3.1e-34 148.7 135 58.5
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 3.1e-34 148.7 118 69.5
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 4.0e-34 148.3 130 61.5
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 5.2e-34 147.9 123 62.6
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 5.2e-34 147.9 135 59.3
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 8.9e-34 147.1 121 64.5
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 1.2e-33 146.7 139 57.6
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 2.0e-33 146.0 131 59.5
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 2.6e-33 145.6 130 60.0
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 2.6e-33 145.6 110 66.4
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 3.4e-33 145.2 108 66.7
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 3.4e-33 145.2 136 60.3
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 5.8e-33 144.4 127 61.4
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 5.8e-33 144.4 137 58.4
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 9.9e-33 143.7 133 58.6
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 1.7e-32 142.9 136 56.6
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 1.7e-32 142.9 136 56.6
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 1.7e-32 142.9 133 57.9
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 2.2e-32 142.5 138 58.0
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 2.9e-32 142.1 141 56.0
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 3.7e-32 141.7 141 56.7
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 3.7e-32 141.7 116 62.9
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 6.4e-32 141.0 130 60.0
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 8.4e-32 140.6 140 55.7
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 1.1e-31 140.2 123 60.2
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.1e-31 140.2 135 57.0
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.1e-31 140.2 135 57.0
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 1.9e-31 139.4 119 60.5
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 5.4e-31 137.9 139 54.7
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.2e-30 136.7 139 54.7
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 2.1e-30 136.0 137 54.7
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 2.7e-30 135.6 108 66.7
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 4.6e-30 134.8 108 63.9
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 4.6e-30 134.8 127 59.8
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 6.0e-30 134.4 126 56.3
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 1.3e-29 133.3 130 56.2
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.7e-29 132.9 135 57.0
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 2.3e-29 132.5 117 60.7
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 2.3e-29 132.5 113 61.9
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 2.3e-29 132.5 116 62.1
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 6.6e-29 131.0 131 56.5
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.5e-28 129.8 122 55.7
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.6e-27 126.3 111 57.7
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 2.1e-27 125.9 117 59.0
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 6.2e-27 124.4 95 64.2
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 8.1e-27 124.0 124 61.3
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 3.4e-25 118.6 134 50.7
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.4e-23 112.5 117 56.4
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 1.6e-22 109.8 110 59.1
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 7.8e-22 107.5 96 59.4
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 5.1e-21 104.8 128 45.3
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 6.6e-21 104.4 124 44.4
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 1.3e-19 100.1 130 43.1
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 3.2e-15 85.5 127 40.9
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.0e-09 66.2 55 65.5


User provided reference genes

Program Settings