Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012014 Daucus carota HOM05D001384 ORTHO05D001215 1.9e-18 95.1 61 100.0
Migut.J01071 Erythranthe guttata HOM05D001384 ORTHO05D001215 7.9e-12 73.2 61 63.9
DCAR_010686 Daucus carota HOM05D001384 ORTHO05D001215 3.3e-10 67.8 64 75.0
Thecc.09G095500 Theobroma cacao HOM05D001384 ORTHO05D001215 2.8e-09 64.7 64 60.9
HanXRQChr10g0319041 Helianthus annuus HOM05D001384 ORTHO05D001215 6.3e-09 63.5 63 57.1
Migut.K00567 Erythranthe guttata HOM05D001384 ORTHO05D001215 8.2e-09 63.2 64 64.1
Haze_25860 Corylus avellana HOM05D001384 ORTHO05D001215 1.4e-08 62.4 72 66.7
TAR626G0551 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.4e-08 62.4 64 59.4
CSS0002673 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.8e-08 62.0 68 69.1
CSS0049312 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.8e-08 62.0 68 69.1
HanXRQChr12g0355291 Helianthus annuus HOM05D001384 ORTHO05D001215 1.8e-08 62.0 63 63.5
Lj2g0025499 Lotus japonicus HOM05D001384 ORTHO05D001215 4.1e-08 60.8 64 68.8
MD02G1072000 Malus domestica HOM05D001384 ORTHO05D001215 4.1e-08 60.8 64 59.4
Psat1g048920 Pisum sativum HOM05D001384 ORTHO05D001215 5.3e-08 60.5 64 68.8
CSS0028432 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 6.9e-08 60.1 67 67.2
Glyma.07G127200 Glycine max HOM05D001384 ORTHO05D001215 9.1e-08 59.7 64 59.4
Peaxi162Scf00498g00030 Petunia axillaris HOM05D001384 ORTHO05D001215 9.1e-08 59.7 63 55.6
Lsat_1_v5_gn_7_38720 Lactuca sativa HOM05D001384 ORTHO05D001215 1.2e-07 59.3 61 50.8
Dinv37556 Davidia involucrata HOM05D001384 ORTHO05D001215 1.5e-07 58.9 63 55.6
Glyma.01G004600 Glycine max HOM05D001384 ORTHO05D001215 1.5e-07 58.9 66 62.1
MD15G1201800 Malus domestica HOM05D001384 ORTHO05D001215 1.5e-07 58.9 64 57.8
Prupe.7G215700 Prunus persica HOM05D001384 ORTHO05D001215 1.5e-07 58.9 64 56.2
Nn8g38978 Nelumbo nucifera HOM05D001384 ORTHO05D001215 2.0e-07 58.5 63 54.0
Nitab4.5_0000540g0040 Nicotiana tabacum HOM05D001384 ORTHO05D001215 2.6e-07 58.2 63 55.6
Phvul.004G173101 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 2.6e-07 58.2 64 60.9
HanXRQChr09g0238501 Helianthus annuus HOM05D001384 ORTHO05D001215 3.4e-07 57.8 63 49.2
arahy.Tifrunner.gnm1.ann1.3Z4R3A Arachis hypogaea HOM05D001384 ORTHO05D001215 5.9e-07 57.0 64 57.8
arahy.Tifrunner.gnm1.ann1.TI6HCL Arachis hypogaea HOM05D001384 ORTHO05D001215 5.9e-07 57.0 64 57.8
Gohir.A11G094700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 7.7e-07 56.6 54 64.8
Gohir.D11G099700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 7.7e-07 56.6 54 53.7
Gorai.007G105900 Gossypium raimondii HOM05D001384 ORTHO05D001215 7.7e-07 56.6 54 53.7
GSVIVG01015262001 Vitis vinifera HOM05D001384 ORTHO05D001215 7.7e-07 56.6 66 68.2
COL.COLO4_18260 Corchorus olitorius HOM05D001384 ORTHO05D001215 1.0e-06 56.2 56 60.7
Cc06_g10880 Coffea canephora HOM05D001384 ORTHO05D001215 1.3e-06 55.8 64 60.9
FvH4_7g30990 Fragaria vesca HOM05D001384 ORTHO05D001215 2.2e-06 55.1 55 54.5
Medtr6g090535 Medicago truncatula HOM05D001384 ORTHO05D001215 2.2e-06 55.1 64 53.1
TWI14G0223 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 2.2e-06 55.1 64 60.9
Gohir.A11G210500 Gossypium hirsutum HOM05D001384 ORTHO05D001215 2.9e-06 54.7 54 51.9
Nitab4.5_0003781g0080 Nicotiana tabacum HOM05D001384 ORTHO05D001215 2.9e-06 54.7 61 55.7
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 2.9e-06 54.7 63 52.4
FvH4_1g06710 Fragaria vesca HOM05D001384 ORTHO05D001215 5.0e-06 53.9 65 52.3
Gohir.A10G068700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 5.0e-06 53.9 54 50.0
TWI81G0992 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 5.0e-06 53.9 65 50.8
TAR636G2986 Trochodendron aralioides HOM05D001384 ORTHO05D001215 5.0e-06 53.9 63 58.7
TWI39G0811 Tripterygium wilfordii HOM05D001384 ORTHO05D001215 6.5e-06 53.5 64 57.8
Actinidia28493 Actinidia chinensis HOM05D001384 ORTHO05D001215 8.5e-06 53.1 54 51.9
FAN06G1205 Fragaria x ananassa HOM05D001384 ORTHO05D001215 8.5e-06 53.1 57 52.6
FAN23G2194 Fragaria x ananassa HOM05D001384 ORTHO05D001215 8.5e-06 53.1 65 50.8


User provided reference genes

Program Settings