Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 4.4e-115 417.9 206 100.0
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 2.8e-77 292.4 210 68.6
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.7e-77 292.0 219 66.2
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 8.5e-74 280.8 204 66.7
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.9e-73 279.6 221 65.2
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 1.9e-73 279.6 206 64.1
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 4.2e-73 278.5 212 64.2
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 7.2e-73 277.7 204 63.2
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 1.6e-72 276.6 206 64.1
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 4.6e-72 275.0 204 65.7
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 2.3e-71 272.7 204 65.7
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 3.0e-71 272.3 204 61.8
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 3.9e-71 271.9 206 62.1
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 3.9e-71 271.9 206 62.1
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 8.7e-71 270.8 206 62.1
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.9e-70 269.6 204 63.7
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 7.4e-70 267.7 206 62.6
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 7.4e-70 267.7 206 63.6
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 2.8e-69 265.8 225 58.7
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 3.7e-69 265.4 187 67.9
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 2.4e-68 262.7 204 59.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.4e-68 262.7 211 62.1
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.4e-68 262.7 189 65.1
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 6.9e-68 261.2 211 58.8
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.1e-68 260.8 206 60.7
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.5e-67 260.0 206 60.7
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.5e-67 260.0 188 64.4
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.5e-67 260.0 206 60.7
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 2.6e-67 259.2 219 57.5
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.6e-67 259.2 206 62.1
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.5e-67 258.5 206 63.6
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 5.9e-67 258.1 206 60.7
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.7e-66 256.5 204 61.3
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 1.7e-66 256.5 206 61.7
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.9e-66 255.8 211 59.2
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 3.8e-66 255.4 206 60.2
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 5.0e-66 255.0 206 59.2
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 6.5e-66 254.6 208 62.0
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 6.5e-66 254.6 206 61.2
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.1e-65 253.8 206 60.2
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.5e-65 252.7 206 61.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 4.2e-65 251.9 244 52.5
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 4.2e-65 251.9 180 63.9
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 5.5e-65 251.5 204 62.7
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 7.2e-65 251.1 206 59.7
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.2e-64 250.4 206 61.2
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.2e-64 250.4 204 59.3
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 3.6e-64 248.8 208 58.7
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 4.6e-64 248.4 207 59.9
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 4.6e-64 248.4 207 60.4
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 7.9e-64 247.7 206 57.8
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 1.0e-63 247.3 206 59.2
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.8e-63 246.5 199 62.3
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 5.1e-63 245.0 207 58.0
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 8.8e-63 244.2 207 60.4
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 8.8e-63 244.2 207 61.4
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 1.1e-62 243.8 207 58.0
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.5e-62 243.4 204 59.8
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 2.0e-62 243.0 207 59.9
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 3.3e-62 242.3 175 63.4
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 5.7e-62 241.5 206 55.3
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 7.4e-62 241.1 206 55.3
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 7.4e-62 241.1 206 55.8
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 9.7e-62 240.7 206 56.3
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 9.7e-62 240.7 206 58.3
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.7e-61 240.0 206 56.8
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.7e-61 240.0 206 56.8
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.7e-61 240.0 206 55.8
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 6.3e-61 238.0 206 55.8
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.8e-60 236.5 207 56.0
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 6.9e-60 234.6 208 56.7
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 6.9e-60 234.6 186 59.1
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.5e-59 233.4 206 54.9
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 2.6e-59 232.6 207 58.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 3.4e-59 232.3 207 57.5
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 4.5e-59 231.9 208 56.2
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 7.7e-59 231.1 206 54.9
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.7e-58 229.9 234 50.9
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 5.0e-58 228.4 179 57.0
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 1.9e-57 226.5 207 56.0
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 4.2e-57 225.3 195 55.9
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 4.8e-53 211.8 199 52.8
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 1.8e-52 209.9 186 53.8
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.0e-50 204.1 148 64.2
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.1e-49 200.7 204 50.0
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.1e-48 196.4 142 62.7
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 4.7e-48 195.3 165 55.2
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.6e-46 189.5 220 50.0
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 3.3e-46 189.1 141 61.0
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 2.8e-45 186.0 170 51.2
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 2.2e-42 176.4 162 53.1
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 1.7e-37 160.2 156 52.6
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 2.4e-36 156.4 199 46.2
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.0e-34 151.0 135 56.3
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.2e-32 144.1 106 66.0
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 2.1e-32 143.3 173 43.9
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.8e-31 140.2 131 52.7
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 9.8e-30 134.4 151 46.4
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 6.6e-26 121.7 165 37.6
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 4.3e-25 119.0 69 73.9
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 2.3e-23 113.2 112 46.4
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 1.4e-20 104.0 109 53.2
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.8e-20 103.6 92 57.6
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 3.5e-19 99.4 148 39.2
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 8.6e-18 94.7 191 34.0
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.0e-16 88.2 78 56.4
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 1.8e-15 87.0 56 67.9
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 2.3e-15 86.7 92 48.9
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 7.5e-14 81.6 49 69.4
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 1.1e-09 67.8 204 28.9
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 7.3e-09 65.1 39 69.2
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 6.2e-08 62.0 82 46.3
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 2.3e-07 60.1 98 39.8
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.2e-06 57.8 34 73.5
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 3.4e-06 56.2 58 51.7
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 9.9e-06 54.7 45 55.6


User provided reference genes

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