Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 3.6e-202 708.0 348 100.0
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 1.1e-161 573.5 368 74.7
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 2.0e-160 569.3 372 73.4
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 1.8e-156 556.2 368 72.0
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 3.0e-156 555.4 368 72.6
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 6.7e-156 554.3 368 72.8
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 3.7e-154 548.5 368 71.7
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 1.1e-153 547.0 368 72.3
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 6.9e-153 544.3 368 71.7
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 1.5e-152 543.1 368 71.2
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 2.0e-152 542.7 368 70.1
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 4.5e-152 541.6 368 70.9
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 4.5e-152 541.6 368 70.7
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 1.0e-151 540.4 368 71.5
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 1.3e-151 540.0 368 70.1
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 1.3e-151 540.0 368 69.6
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 2.2e-151 539.3 364 72.8
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 2.9e-151 538.9 368 70.7
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 5.0e-151 538.1 368 70.4
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 5.0e-151 538.1 368 69.0
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 5.0e-151 538.1 368 69.3
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 6.5e-151 537.7 368 68.8
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 6.5e-151 537.7 368 69.0
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 8.5e-151 537.3 368 70.4
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 1.1e-150 537.0 368 70.4
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.4e-150 536.6 364 69.0
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 1.9e-150 536.2 368 69.0
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 2.5e-150 535.8 368 69.6
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 2.5e-150 535.8 364 69.0
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 9.4e-150 533.9 368 70.7
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.2e-149 533.5 364 70.3
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 1.2e-149 533.5 371 69.8
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 2.1e-149 532.7 367 69.2
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 2.1e-149 532.7 371 69.5
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 2.7e-149 532.3 364 71.2
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 3.6e-149 531.9 368 69.6
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 4.6e-149 531.6 364 70.9
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 6.1e-149 531.2 368 70.7
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 7.9e-149 530.8 364 70.9
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 7.9e-149 530.8 368 70.1
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 7.9e-149 530.8 368 69.3
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 1.0e-148 530.4 368 67.9
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 1.4e-148 530.0 368 70.7
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 1.4e-148 530.0 368 69.6
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 1.4e-148 530.0 369 69.1
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 3.0e-148 528.9 369 69.6
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 3.0e-148 528.9 368 68.5
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 3.9e-148 528.5 368 69.0
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 3.9e-148 528.5 374 69.8
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 5.1e-148 528.1 368 69.3
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 8.8e-148 527.3 368 68.2
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 8.8e-148 527.3 368 69.8
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 1.5e-147 526.6 364 68.7
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 2.0e-147 526.2 367 67.0
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 4.3e-147 525.0 368 70.1
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 5.7e-147 524.6 369 67.8
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 7.4e-147 524.2 368 68.2
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 9.7e-147 523.9 368 66.0
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 1.3e-146 523.5 368 67.7
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 1.3e-146 523.5 369 69.6
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 1.7e-146 523.1 368 68.5
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 8.2e-146 520.8 368 66.8
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.1e-145 520.4 369 68.8
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 1.4e-145 520.0 369 68.6
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 4.1e-145 518.5 372 68.0
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 5.3e-145 518.1 353 70.5
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 5.9e-144 514.6 372 68.5
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 2.9e-143 512.3 354 70.1
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 1.1e-142 510.4 368 68.5
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 1.1e-142 510.4 378 65.9
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 7.2e-142 507.7 356 69.9
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 1.6e-141 506.5 353 69.1
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 2.1e-141 506.1 364 69.0
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 2.1e-141 506.1 371 66.0
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 3.6e-141 505.4 416 61.5
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 4.7e-141 505.0 366 64.8
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 6.1e-141 504.6 364 68.1
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 7.9e-141 504.2 364 67.6
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 7.9e-141 504.2 364 67.6
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 7.9e-141 504.2 364 68.1
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 2.3e-140 502.7 364 68.4
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 2.3e-140 502.7 364 68.4
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 2.3e-140 502.7 364 68.4
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 2.3e-140 502.7 364 68.1
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 3.0e-140 502.3 364 68.1
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 3.0e-140 502.3 364 68.1
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 3.0e-140 502.3 364 68.1
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 3.0e-140 502.3 364 68.1
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 3.9e-140 501.9 364 67.9
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 3.9e-140 501.9 364 67.9
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 3.9e-140 501.9 364 67.9
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 8.8e-140 500.7 364 67.9
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 2.6e-139 499.2 364 67.3
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 4.4e-139 498.4 364 67.3
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 7.4e-139 497.7 364 67.6
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 8.2e-138 494.2 480 54.2
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 1.4e-137 493.4 299 78.3
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 1.8e-137 493.0 364 67.0
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.1e-137 491.9 372 66.9
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 5.3e-137 491.5 372 66.9
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.6e-136 489.2 372 65.9
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 5.9e-136 488.0 369 63.7
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.5e-134 483.4 371 65.0
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.8e-132 476.5 383 64.2
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.0e-131 473.0 372 65.1
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 2.0e-131 473.0 339 68.4
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 3.3e-131 472.2 301 72.8
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 1.7e-130 469.9 369 59.9
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 2.4e-129 466.1 369 60.2
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 4.1e-129 465.3 368 64.9
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 5.3e-129 464.9 340 68.2
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 1.0e-127 460.7 433 56.1
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 1.1e-126 457.2 363 64.5
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 9.4e-126 454.1 340 65.0
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.2e-125 453.8 372 58.1
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.6e-125 453.4 368 58.7
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 6.1e-125 451.4 300 71.7
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 6.1e-125 451.4 368 62.5
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 6.1e-125 451.4 368 61.7
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 3.4e-123 445.7 376 57.4
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 1.4e-121 440.3 368 60.1
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 3.1e-121 439.1 380 59.7
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 2.0e-120 436.4 303 69.6
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 4.2e-118 428.7 368 60.9
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 7.2e-118 427.9 445 52.8
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 2.0e-115 419.9 338 59.8
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 4.9e-114 415.2 465 49.9
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 3.1e-113 412.5 337 61.4
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 5.4e-113 411.8 366 59.6
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 1.3e-111 407.1 303 64.4
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 6.6e-111 404.8 335 60.9
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.9e-110 403.3 334 60.8
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 6.1e-109 398.3 309 64.4
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 2.3e-108 396.4 368 56.8
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 5.7e-107 391.7 259 70.7
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 7.5e-107 391.3 364 56.0
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 1.8e-105 386.7 263 70.7
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 1.8e-105 386.7 263 71.1
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 2.4e-105 386.3 256 73.0
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 3.2e-105 386.0 349 55.9
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.6e-104 383.6 252 71.8
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 1.1e-102 377.5 357 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 2.8e-101 372.9 300 59.3
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 1.0e-100 370.9 369 55.8
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 1.2e-96 357.5 210 78.1
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 7.5e-91 338.2 239 67.4
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 5.1e-87 325.5 228 70.6
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 3.4e-83 312.8 336 51.2
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 3.7e-82 309.3 225 66.7
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 4.4e-75 285.8 390 42.1
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 6.2e-61 238.8 155 73.5
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 1.6e-56 224.2 143 72.0
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 1.7e-50 204.1 192 54.2
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 3.8e-50 203.0 360 37.2
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 4.2e-49 199.5 147 66.0
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 1.6e-48 197.6 176 51.7
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.8e-47 194.1 145 66.9
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 4.5e-43 179.5 163 58.3
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.1e-41 174.9 172 54.1
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.5e-41 173.7 312 34.9
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 2.8e-37 160.2 116 69.8
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 2.0e-27 127.5 100 59.0
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 1.1e-20 105.1 74 68.9
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 1.4e-20 104.8 191 32.5
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 1.6e-16 91.3 49 81.6
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.1e-16 90.9 251 27.9
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 9.7e-14 82.0 47 76.6
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 1.3e-13 81.6 53 69.8
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 5.0e-10 69.7 63 52.4
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 8.0e-08 62.4 60 53.3
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 5.7e-06 56.2 56 51.8


User provided reference genes

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