Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011893 Daucus carota HOM05D002957 ORTHO05D007941 7.3e-104 380.6 191 100.0
DCAR_026193 Daucus carota HOM05D002957 ORTHO05D007941 7.4e-64 247.7 198 68.2
Nn3g16664 Nelumbo nucifera HOM05D002957 ORTHO05D007941 1.6e-55 219.9 200 58.5
Oeu063270.2 Olea europaea HOM05D002957 ORTHO05D007941 2.4e-54 216.1 200 58.0
Hma1.2p1_1092F.1_g255880 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 9.0e-54 214.2 198 55.6
GSVIVG01007604001 Vitis vinifera HOM05D002957 ORTHO05D007941 2.6e-53 212.6 209 54.5
Dinv38506 Davidia involucrata HOM05D002957 ORTHO05D007941 3.4e-53 212.2 196 57.1
ECA247G2183 Erigeron canadensis HOM05D002957 ORTHO05D007941 2.2e-52 209.5 197 56.9
CSS0001501 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 2.9e-52 209.1 200 57.0
Actinidia36761 Actinidia chinensis HOM05D002957 ORTHO05D007941 6.5e-52 208.0 200 56.5
CSS0023443 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 1.4e-51 206.8 200 56.0
AUR62022097 Chenopodium quinoa HOM05D002957 ORTHO05D007941 2.5e-51 206.1 198 56.1
Lsat_1_v5_gn_1_28561 Lactuca sativa HOM05D002957 ORTHO05D007941 7.1e-51 204.5 200 55.0
Ciclev10021427m.g Citrus clementina HOM05D002957 ORTHO05D007941 9.3e-51 204.1 200 53.5
MD06G1224500 Malus domestica HOM05D002957 ORTHO05D007941 9.3e-51 204.1 200 55.0
RcHm_v2.0_Chr7g0192141 Rosa chinensis HOM05D002957 ORTHO05D007941 9.3e-51 204.1 200 54.5
Sc04g0001210 Simmondsia chinensis HOM05D002957 ORTHO05D007941 9.3e-51 204.1 200 53.5
TAR622G0090 Trochodendron aralioides HOM05D002957 ORTHO05D007941 1.6e-50 203.4 200 54.5
Atru.chr9.2618 Acer truncatum HOM05D002957 ORTHO05D007941 2.1e-50 203.0 200 53.0
ClCG06G017470 Citrullus lanatus HOM05D002957 ORTHO05D007941 2.1e-50 203.0 200 54.0
Lj5A132G82 Lonicera japonica HOM05D002957 ORTHO05D007941 2.1e-50 203.0 197 54.8
FAN08G0527 Fragaria x ananassa HOM05D002957 ORTHO05D007941 2.7e-50 202.6 200 54.5
FAN18G4082 Fragaria x ananassa HOM05D000025 ORTHO05D007941 2.7e-50 202.6 200 54.5
HanXRQChr02g0035391 Helianthus annuus HOM05D002957 ORTHO05D007941 2.7e-50 202.6 200 53.0
FvH4_5g06601 Fragaria vesca HOM05D002957 ORTHO05D007941 3.5e-50 202.2 200 54.5
SalBow5G1405 Salvia bowleyana HOM05D002957 ORTHO05D007941 4.6e-50 201.8 200 53.5
Lj1g0012275 Lotus japonicus HOM05D002957 ORTHO05D007941 6.0e-50 201.4 200 53.5
QL03p060389 Quercus lobata HOM05D002957 ORTHO05D007941 6.0e-50 201.4 173 59.0
Thecc.03G117300 Theobroma cacao HOM05D002957 ORTHO05D007941 6.0e-50 201.4 200 53.0
EL10Ac7g18022 Beta vulgaris HOM05D002957 ORTHO05D007941 7.9e-50 201.1 200 54.0
Rhsim12G0169500 Rhododendron simsii HOM05D002957 ORTHO05D007941 1.0e-49 200.7 200 54.0
Duzib084G0342 Durio zibethinus HOM05D002957 ORTHO05D007941 1.3e-49 200.3 200 53.5
Migut.O00181 Erythranthe guttata HOM05D002957 ORTHO05D007941 1.3e-49 200.3 193 54.9
CsaV3_1G000990 Cucumis sativus L. HOM05D002957 ORTHO05D007941 1.8e-49 199.9 200 53.5
Lj1g0016898 Lotus japonicus HOM05D002957 ORTHO05D007941 1.8e-49 199.9 200 53.0
Potri.015G086100 Populus trichocarpa HOM05D002957 ORTHO05D007941 1.8e-49 199.9 200 53.0
Cfa019259 Carpinus fangiana HOM05D002957 ORTHO05D007941 2.3e-49 199.5 200 55.5
Nitab4.5_0001377g0020 Nicotiana tabacum HOM05D002957 ORTHO05D007941 2.3e-49 199.5 200 52.5
Gohir.D12G188700 Gossypium hirsutum HOM05D002957 ORTHO05D007941 3.0e-49 199.1 200 52.5
Gorai.008G202600 Gossypium raimondii HOM05D002957 ORTHO05D007941 3.0e-49 199.1 200 52.5
Sabra15G0109000 Salix brachista HOM05D002957 ORTHO05D007941 3.9e-49 198.7 200 52.5
MELO3C026250.2 Cucumis melo HOM05D002957 ORTHO05D007941 6.7e-49 198.0 200 53.5
Nitab4.5_0000025g0240 Nicotiana tabacum HOM05D002957 ORTHO05D007941 6.7e-49 198.0 200 52.5
PGR083G0505 Punica granatum HOM05D002957 ORTHO05D007941 6.7e-49 198.0 200 54.0
Sed0027100 Sechium edule HOM05D002957 ORTHO05D007941 8.7e-49 197.6 197 52.8
Aqoxy5G03698 Aquilegia oxysepala HOM05D002957 ORTHO05D007941 2.5e-48 196.1 188 54.3
CiPaw.11G016500 Carya illinoinensis HOM05D002957 ORTHO05D007941 3.3e-48 195.7 200 53.5
VMungo1309G1657 Vigna mungo HOM05D002957 ORTHO05D007941 3.3e-48 195.7 200 52.5
Cc04_g11180 Coffea canephora HOM05D002957 ORTHO05D007941 4.3e-48 195.3 200 52.0
Glyma.06G175800 Glycine max HOM05D002957 ORTHO05D007941 4.3e-48 195.3 200 51.5
Lalb_Chr11g0069861 Lupinus albus HOM05D002957 ORTHO05D007941 5.7e-48 194.9 200 51.5
PSO063G7275 Papaver somniferum HOM05D002957 ORTHO05D007941 5.7e-48 194.9 200 52.0
CANSAT80G1905 Cannabis sativa HOM05D002957 ORTHO05D007941 7.4e-48 194.5 200 52.0
Medtr3g075540 Medicago truncatula HOM05D002957 ORTHO05D007941 7.4e-48 194.5 200 51.5
PSO210G3123 Papaver somniferum HOM05D002957 ORTHO05D007941 9.6e-48 194.1 200 51.5
Phvul.009G171900 Phaseolus vulgaris HOM05D002957 ORTHO05D007941 9.6e-48 194.1 200 51.5
Sopen12g011690 Solanum pennellii HOM05D002957 ORTHO05D007941 1.3e-47 193.7 200 53.0
TPR.G35599 Trifolium pratense HOM05D002957 ORTHO05D007941 3.7e-47 192.2 212 50.5
vmacro22887 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 4.8e-47 191.8 218 50.0
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 4.8e-47 191.8 218 50.0
arahy.Tifrunner.gnm1.ann1.DF1MTK Arachis hypogaea HOM05D002957 ORTHO05D007941 1.4e-46 190.3 213 48.8
SGA_v2.0_scaffold90G27815 Striga asiatica HOM05D002957 ORTHO05D007941 1.4e-46 190.3 229 47.2
Haze_07617 Corylus avellana HOM05D002957 ORTHO05D007941 2.0e-45 186.4 232 49.1
arahy.Tifrunner.gnm1.ann1.0G1QRI Arachis hypogaea HOM05D002957 ORTHO05D007941 1.0e-44 184.1 189 50.8
unitig_8.g3070 Utricularia gibba HOM05D002957 ORTHO05D007941 1.0e-44 184.1 200 49.0
Aa31LG7G11100 Aethionema arabicum HOM05D002957 ORTHO05D007941 2.9e-44 182.6 200 48.0
Thhalv10025885m.g Eutrema salsugineum HOM05D002957 ORTHO05D007941 3.8e-44 182.2 200 48.0
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.0e-44 181.8 197 48.2
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 5.0e-44 181.8 197 48.2
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 5.0e-44 181.8 197 48.2
Peaxi162Scf00801g00733 Petunia axillaris HOM05D002957 ORTHO05D007941 5.0e-44 181.8 234 44.9
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 6.5e-44 181.4 196 48.5
CAN.G59.20 Capsicum annuum HOM05D002957 ORTHO05D007941 1.1e-43 180.6 187 52.4
Sp7g22730 Schrenkiella parvula HOM05D002957 ORTHO05D007941 5.5e-43 178.3 200 47.0
CARHR232120 Cardamine hirsuta HOM05D002957 ORTHO05D007941 1.6e-42 176.8 200 47.0
Carub.0007s1631 Capsella rubella HOM05D002957 ORTHO05D007941 3.6e-42 175.6 200 46.0
AL7G28440 Arabidopsis lyrata HOM05D002957 ORTHO05D007941 4.6e-42 175.3 200 46.0
AT4G24750 Arabidopsis thaliana HOM05D002957 ORTHO05D007941 4.6e-42 175.3 200 45.5
THA.LOC104809647 Tarenaya hassleriana HOM05D002957 ORTHO05D007941 7.9e-42 174.5 200 50.0
BcaC09g50835 Brassica carinata HOM05D002957 ORTHO05D007941 1.3e-41 173.7 205 46.3
Os02g0596000 Oryza sativa ssp. japonica HOM05D002957 ORTHO05D007941 5.7e-40 168.3 200 46.0
COL.COLO4_37865 Corchorus olitorius HOM05D002957 ORTHO05D007941 3.7e-39 165.6 182 53.3
Zm00001eb246160 Zea mays HOM05D002957 ORTHO05D007941 1.8e-38 163.3 200 45.5
Cpa.g.sc159.6 Carica papaya HOM05D002957 ORTHO05D007941 6.9e-38 161.4 197 47.2
MBI10_g44128_MAGBIO Magnolia biondii HOM05D002957 ORTHO05D007941 6.9e-38 161.4 175 52.6
Eucgr.B00189 Eucalyptus grandis HOM05D002957 ORTHO05D007941 2.6e-37 159.5 186 48.9
TWI39G0012 Tripterygium wilfordii HOM05D002957 ORTHO05D007941 2.6e-37 159.5 175 50.3
AagrBONN_evm.TU.Sc2ySwM_344.1972 Anthoceros agrestis HOM05D002957 ORTHO05D007941 7.7e-37 157.9 196 46.4
Mapoly0042s0113 Marchantia polymorpha HOM05D002957 ORTHO05D007941 5.5e-35 151.8 214 40.2
Hund05604 Selenicereus undatus HOM05D002957 ORTHO05D007941 6.7e-33 144.8 85 83.5
SMO364G0570 Selaginella moellendorffii HOM05D002957 ORTHO05D007941 3.3e-32 142.5 221 40.3
AUR62001223 Chenopodium quinoa HOM05D002957 ORTHO05D007941 5.7e-32 141.7 152 53.9
CBR_g34898 Chara braunii HOM05D002957 ORTHO05D007941 3.1e-30 136.0 216 38.0
Pp3c6_20980 Physcomitrium patens HOM05D002957 ORTHO05D007941 1.7e-28 130.2 219 36.1
Ah.08g218480 Amaranthus hybridus HOM05D002957 ORTHO05D007941 2.5e-27 126.3 157 45.2
Prupe.5G163400 Prunus persica HOM05D002957 ORTHO05D007941 2.5e-27 126.3 148 48.0
Pp3c7_15530 Physcomitrium patens HOM05D002957 ORTHO05D007941 3.2e-27 125.9 221 37.1
Gohir.A12G185900 Gossypium hirsutum HOM05D002957 ORTHO05D007941 2.7e-26 122.9 149 45.6
CDE08G1276 Ceratophyllum demersum HOM05D002957 ORTHO05D007941 6.1e-26 121.7 81 69.1
Solyc12g021340.3 Solanum lycopersicum HOM05D002957 ORTHO05D007941 6.1e-26 121.7 148 46.6
CiPaw.11G016200 Carya illinoinensis HOM05D002957 ORTHO05D007941 1.1e-24 117.5 85 71.8
Dinv11135 Davidia involucrata HOM05D002957 ORTHO05D007941 9.1e-22 107.8 58 87.9
SEGI_01299 Sequoiadendron giganteum HOM05D002957 ORTHO05D007941 4.5e-21 105.5 76 69.7
Hma1.2p1_1092F.1_g255870 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 3.2e-19 99.4 58 74.1
CDE08G0657 Ceratophyllum demersum HOM05D002957 ORTHO05D007941 2.0e-16 90.1 61 60.7
Psat5g117640 Pisum sativum HOM05D002957 ORTHO05D007941 2.0e-16 90.1 58 65.5
QL10p006228 Quercus lobata HOM05D002957 ORTHO05D007941 4.4e-16 89.0 132 37.9
ATR0199G004 Amborella trichopoda HOM05D002957 ORTHO05D007941 5.7e-16 88.6 58 63.8
Manes.06G111900 Manihot esculenta HOM05D002957 ORTHO05D007941 5.7e-16 88.6 58 63.8
MD14G1168500 Malus domestica HOM05D002957 ORTHO05D007941 9.7e-16 87.8 95 55.8
Dinv11133 Davidia involucrata HOM05D002957 ORTHO05D007941 1.7e-15 87.0 58 67.2
Eucgr.B00193 Eucalyptus grandis HOM05D002957 ORTHO05D007941 1.4e-14 84.0 58 63.8
Sc04g0001230 Simmondsia chinensis HOM05D002957 ORTHO05D007941 9.1e-14 81.3 56 60.7
Solyc12g021330.1 Solanum lycopersicum HOM05D002957 ORTHO05D007941 5.9e-13 78.6 55 69.1
MD14G1168400 Malus domestica HOM05D002957 ORTHO05D007941 1.0e-12 77.8 75 53.3
SalBow5G3338 Salvia bowleyana HOM05D002957 ORTHO05D007941 5.0e-12 75.5 123 39.8
RcHm_v2.0_Chr1g0313851 Rosa chinensis HOM05D002957 ORTHO05D007941 1.8e-09 67.0 57 57.9
RcHm_v2.0_Chr2g0119491 Rosa chinensis HOM05D002957 ORTHO05D007941 1.8e-09 67.0 57 57.9
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 2.8e-07 59.7 234 29.5
arahy.Tifrunner.gnm1.ann1.9Y89B6 Arachis hypogaea HOM05D002957 ORTHO05D082854 1.1e-06 57.8 40 72.5


User provided reference genes

Program Settings