Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 8.4e-58 226.9 119 100.0
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 6.7e-39 164.1 91 94.5
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 1.1e-36 156.8 87 95.4
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 1.7e-26 122.9 89 70.8
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 1.7e-26 122.9 89 68.5
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 3.8e-26 121.7 89 67.4
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 5.0e-26 121.3 89 69.7
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 6.5e-26 120.9 89 69.7
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 1.1e-25 120.2 89 67.4
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 1.2e-24 116.7 89 67.4
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 4.6e-24 114.8 89 68.5
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 3.0e-23 112.1 87 67.8
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 1.5e-22 109.8 89 61.8
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 1.9e-22 109.4 89 64.0
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 1.6e-21 106.3 89 59.6
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 1.6e-21 106.3 90 63.3
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 2.2e-21 105.9 89 60.7
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 2.2e-21 105.9 89 59.6
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.2e-21 105.9 89 59.6
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.2e-21 105.9 89 59.6
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 2.8e-21 105.5 89 60.7
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 2.8e-21 105.5 89 59.6
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 2.8e-21 105.5 90 62.2
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 3.7e-21 105.1 89 59.6
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 6.3e-21 104.4 89 61.8
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 6.3e-21 104.4 87 60.9
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 8.2e-21 104.0 90 63.3
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 8.2e-21 104.0 88 63.6
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.1e-20 103.6 87 63.2
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 1.4e-20 103.2 89 60.7
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.8e-20 102.8 86 66.3
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 1.8e-20 102.8 90 62.2
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 3.1e-20 102.1 88 61.4
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 3.1e-20 102.1 90 58.9
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 5.3e-20 101.3 88 58.0
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 9.0e-20 100.5 89 56.2
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 9.0e-20 100.5 90 61.1
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.2e-19 100.1 87 55.2
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 1.2e-19 100.1 89 58.4
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 1.5e-19 99.8 82 57.3
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.5e-19 99.8 89 56.2
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 2.0e-19 99.4 89 53.9
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.0e-19 99.4 87 54.0
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 2.6e-19 99.0 89 58.4
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 4.5e-19 98.2 89 57.3
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 5.9e-19 97.8 89 60.7
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 7.7e-19 97.4 89 55.1
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 7.7e-19 97.4 89 58.4
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 1.3e-18 96.7 82 65.9
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 1.7e-18 96.3 89 52.8
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 2.2e-18 95.9 90 62.2
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 2.2e-18 95.9 88 59.1
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 2.9e-18 95.5 89 58.4
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 2.9e-18 95.5 80 61.2
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 2.9e-18 95.5 81 61.7
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 3.8e-18 95.1 87 52.9
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 5.0e-18 94.7 88 58.0
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 8.5e-18 94.0 89 56.2
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 8.5e-18 94.0 81 60.5
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.4e-17 93.2 87 55.2
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 3.2e-17 92.0 88 54.5
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 9.4e-17 90.5 88 56.8
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 2.7e-16 89.0 89 55.1
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 2.7e-16 89.0 89 56.2
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 2.7e-16 89.0 90 54.4
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 3.6e-16 88.6 88 53.4
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 4.6e-16 88.2 88 48.9
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 1.8e-15 86.3 89 53.9
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 2.3e-15 85.9 83 51.8
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 2.3e-15 85.9 83 51.8
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 2.3e-15 85.9 84 50.0
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 3.0e-15 85.5 89 51.7
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 3.9e-15 85.1 89 48.3
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 5.1e-15 84.7 87 51.7
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.5e-14 83.2 88 47.7
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.5e-14 83.2 88 47.7
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 5.7e-14 81.3 89 51.7
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 7.4e-14 80.9 89 52.8
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 9.7e-14 80.5 89 50.6
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 9.7e-14 80.5 89 50.6
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 1.3e-13 80.1 84 47.6
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 1.3e-13 80.1 89 49.4
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 1.7e-13 79.7 87 46.0
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 1.7e-13 79.7 81 56.8
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 2.2e-13 79.3 89 50.6
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 2.2e-13 79.3 84 51.2
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 2.8e-13 79.0 89 48.3
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 3.7e-13 78.6 88 47.7
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.7e-13 78.6 87 49.4
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 4.8e-13 78.2 89 50.6
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 4.8e-13 78.2 84 51.2
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 6.3e-13 77.8 89 50.6
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 6.3e-13 77.8 89 50.6
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 8.2e-13 77.4 89 49.4
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 1.1e-12 77.0 90 50.0
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 1.8e-12 76.3 89 52.8
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.8e-12 76.3 82 50.0
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 1.8e-12 76.3 88 51.1
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 3.1e-12 75.5 88 51.1
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 1.2e-11 73.6 83 53.0
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 1.2e-11 73.6 68 54.4
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 2.0e-11 72.8 77 54.5
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 1.3e-10 70.1 81 49.4
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.1e-09 67.0 81 44.4
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 1.4e-09 66.6 79 44.3
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 4.2e-09 65.1 81 42.0
DCAR_028602 Daucus carota HOM05D011166 ORTHO05D012860 1.2e-08 63.5 37 75.7
DCAR_009038 Daucus carota HOM05D011166 ORTHO05D012860 1.6e-08 63.2 37 78.4
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 3.0e-07 58.9 78 43.6
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 3.0e-07 58.9 89 36.0
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 3.9e-07 58.5 70 45.7


User provided reference genes

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