Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 4.4e-106 388.3 242 100.0
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 3.6e-47 192.6 239 51.5
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 4.6e-47 192.2 241 51.9
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.0e-46 189.5 241 49.4
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.1e-43 181.0 247 48.2
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 1.8e-43 180.3 239 49.4
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 4.1e-43 179.1 241 49.0
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.0e-42 176.8 243 46.9
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 3.4e-42 176.0 241 46.5
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.5e-42 175.6 239 47.3
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.0e-41 174.5 246 45.1
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 1.1e-40 171.0 237 45.6
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 2.5e-40 169.9 239 45.6
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 2.5e-40 169.9 243 44.9
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 1.6e-39 167.2 236 44.5
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 6.1e-39 165.2 240 46.7
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 1.0e-38 164.5 243 43.6
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.0e-38 164.5 241 44.4
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.9e-38 162.5 198 51.5
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 5.1e-38 162.2 245 46.1
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 5.1e-38 162.2 241 44.8
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 5.1e-38 162.2 191 50.8
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 6.7e-38 161.8 116 71.6
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 6.7e-38 161.8 227 44.9
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.0e-37 160.2 238 45.8
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 2.6e-37 159.8 240 43.8
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 2.6e-37 159.8 199 49.7
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 3.3e-37 159.5 230 47.0
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 3.3e-37 159.5 198 52.0
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 4.4e-37 159.1 218 46.8
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 7.4e-37 158.3 239 45.2
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 7.4e-37 158.3 243 44.4
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 1.3e-36 157.5 239 43.5
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.7e-36 157.1 117 66.7
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.7e-36 157.1 237 42.6
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.8e-36 156.4 191 50.3
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 3.7e-36 156.0 203 48.8
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 3.7e-36 156.0 198 47.5
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 4.8e-36 155.6 250 42.8
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 1.1e-35 154.5 125 65.6
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.1e-35 154.5 120 69.2
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 1.4e-35 154.1 130 64.6
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 1.4e-35 154.1 130 64.6
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 1.4e-35 154.1 130 64.6
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 1.8e-35 153.7 127 67.7
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 7.0e-35 151.8 239 41.8
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 7.0e-35 151.8 198 46.5
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 7.0e-35 151.8 120 67.5
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 9.1e-35 151.4 112 71.4
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 9.1e-35 151.4 112 71.4
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 9.1e-35 151.4 112 71.4
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 9.1e-35 151.4 112 71.4
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 9.1e-35 151.4 112 71.4
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 9.1e-35 151.4 105 74.3
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 9.1e-35 151.4 105 74.3
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 9.1e-35 151.4 114 69.3
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 1.6e-34 150.6 243 39.9
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 2.0e-34 150.2 112 70.5
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 2.6e-34 149.8 126 64.3
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.6e-34 149.8 243 40.3
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 4.5e-34 149.1 185 49.7
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 4.5e-34 149.1 247 39.7
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 7.7e-34 148.3 114 67.5
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 7.7e-34 148.3 241 40.7
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 1.0e-33 147.9 115 67.0
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 1.3e-33 147.5 114 67.5
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 1.3e-33 147.5 240 39.6
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.3e-33 147.5 245 38.4
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.3e-33 147.5 244 41.4
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 2.9e-33 146.4 114 66.7
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 3.8e-33 146.0 112 69.6
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 5.0e-33 145.6 112 67.0
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 6.5e-33 145.2 125 62.4
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 8.5e-33 144.8 115 62.6
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 1.1e-32 144.4 120 63.3
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 5.5e-32 142.1 120 62.5
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 5.5e-32 142.1 112 66.1
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 7.2e-32 141.7 108 68.5
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 2.1e-31 140.2 216 44.0
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 2.1e-31 140.2 248 40.3
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 3.6e-31 139.4 112 65.2
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 3.6e-31 139.4 242 37.6
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 4.7e-31 139.0 203 40.9
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 4.7e-31 139.0 243 38.7
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 6.1e-31 138.7 247 43.7
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 6.1e-31 138.7 247 43.3
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.0e-30 137.9 248 44.0
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.0e-30 137.9 248 44.0
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 1.4e-30 137.5 205 43.9
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 1.4e-30 137.5 246 39.8
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.4e-30 137.5 119 63.0
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.8e-30 137.1 126 58.7
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 2.3e-30 136.7 127 59.8
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 2.3e-30 136.7 116 63.8
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 4.0e-30 136.0 245 40.8
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 8.8e-30 134.8 118 60.2
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 1.1e-29 134.4 245 41.6
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 4.4e-29 132.5 245 41.6
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.8e-27 127.1 85 72.9
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 1.2e-26 124.4 241 36.5
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 7.7e-26 121.7 131 52.7
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 4.7e-23 112.5 138 51.4
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 6.1e-23 112.1 198 47.0
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 6.8e-22 108.6 163 44.8
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 9.1e-19 98.2 177 39.0
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.1e-16 91.3 110 51.8
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 1.6e-15 87.4 124 47.6
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 3.6e-15 86.3 174 33.9
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 1.1e-08 64.7 191 30.9
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 1.8e-06 57.4 64 46.9


User provided reference genes

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