Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 6.1e-244 847.0 422 100.0
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 9.8e-186 653.7 417 78.2
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 1.4e-184 649.8 416 77.6
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 3.9e-182 641.7 417 75.3
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 6.6e-182 641.0 418 74.2
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 2.3e-179 632.5 418 73.7
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 3.4e-178 628.6 418 73.4
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 4.9e-177 624.8 418 74.6
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 6.4e-177 624.4 424 72.4
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 5.4e-176 621.3 418 72.0
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 5.4e-176 621.3 419 72.8
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 9.2e-176 620.5 419 71.1
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 9.2e-176 620.5 417 71.9
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 1.2e-175 620.2 417 72.9
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 1.2e-175 620.2 417 71.7
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 2.1e-175 619.4 416 71.4
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 6.0e-175 617.8 418 71.5
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 1.0e-174 617.1 421 71.7
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 1.3e-174 616.7 425 72.0
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 2.3e-174 615.9 415 70.8
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 5.1e-174 614.8 418 71.8
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 5.1e-174 614.8 425 70.8
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 5.1e-174 614.8 418 71.3
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 6.6e-174 614.4 418 71.5
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 6.6e-174 614.4 419 72.1
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 8.6e-174 614.0 420 72.4
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.1e-173 613.6 425 70.4
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 1.5e-173 613.2 422 71.3
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 2.8e-172 609.0 417 70.5
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 3.6e-172 608.6 415 70.6
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 8.1e-172 607.4 421 70.5
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 1.1e-171 607.1 417 70.7
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 1.4e-171 606.7 406 74.4
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 1.4e-171 606.7 421 70.3
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 1.4e-171 606.7 418 70.3
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 4.0e-171 605.1 415 71.1
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 5.2e-171 604.7 419 69.5
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 1.2e-170 603.6 398 75.1
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 1.2e-170 603.6 420 69.8
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 4.4e-170 601.7 415 69.9
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 7.6e-170 600.9 420 69.3
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 9.9e-170 600.5 420 69.3
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 9.9e-170 600.5 419 69.2
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 1.7e-169 599.7 418 68.7
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 1.7e-169 599.7 418 69.4
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 2.2e-169 599.4 419 69.7
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 2.9e-169 599.0 419 69.2
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 3.8e-169 598.6 418 68.9
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 3.8e-169 598.6 416 70.9
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 4.9e-169 598.2 427 68.9
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 8.4e-169 597.4 417 69.1
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 8.4e-169 597.4 415 69.6
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 1.1e-168 597.0 418 70.3
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 1.4e-168 596.7 418 69.1
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 1.4e-168 596.7 431 68.2
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 3.2e-168 595.5 419 69.5
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 4.1e-168 595.1 420 68.8
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.6e-167 593.2 420 68.3
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 2.1e-167 592.8 392 74.0
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 2.1e-167 592.8 417 67.6
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 4.6e-167 591.7 416 69.5
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 7.8e-167 590.9 420 68.3
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.3e-166 590.1 420 68.1
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 3.9e-166 588.6 413 67.8
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 8.7e-166 587.4 414 69.3
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 1.9e-165 586.3 418 68.4
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 3.3e-165 585.5 414 69.3
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 4.3e-165 585.1 419 67.8
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 9.6e-165 583.9 415 68.4
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 9.6e-165 583.9 420 68.3
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 9.0e-163 577.4 421 66.0
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 9.9e-162 573.9 422 68.2
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 9.9e-162 573.9 378 73.5
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 8.4e-161 570.9 423 66.0
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 1.4e-160 570.1 421 66.0
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 3.2e-160 568.9 391 71.1
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 1.2e-159 567.0 420 66.7
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 2.3e-158 562.8 424 64.4
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 3.0e-158 562.4 436 64.7
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 1.9e-157 559.7 419 65.9
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 5.6e-157 558.1 436 64.0
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 5.6e-157 558.1 422 65.4
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 1.3e-156 557.0 426 65.0
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 1.1e-155 553.9 376 72.1
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 1.1e-155 553.9 424 65.1
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 6.9e-155 551.2 395 68.9
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 2.2e-153 546.2 401 69.1
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 2.2e-153 546.2 392 67.3
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 2.8e-148 529.3 414 62.8
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 4.8e-148 528.5 399 64.4
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 8.1e-148 527.7 427 61.6
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 4.0e-147 525.4 397 65.5
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 2.0e-146 523.1 338 76.6
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 1.0e-142 510.8 427 59.3
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 3.0e-142 509.2 384 66.4
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 2.8e-140 502.7 427 58.5
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 2.5e-133 479.6 483 52.4
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 9.7e-133 477.6 420 59.3
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 1.3e-129 467.2 403 58.8
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 6.3e-124 448.4 441 49.7
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 7.4e-117 424.9 441 47.6
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 7.4e-117 424.9 441 47.6
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.4e-115 419.9 407 55.3
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 1.3e-113 414.1 429 52.9
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 4.2e-112 409.1 284 70.8
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 3.9e-110 402.5 393 49.6
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 1.5e-101 374.0 287 63.8
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 2.0e-101 373.6 222 81.1
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 1.5e-93 347.4 419 48.4
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 1.3e-92 344.4 423 49.6
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 4.1e-91 339.3 252 65.9
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.3e-73 281.2 240 57.9
Glyma.17G068567 Glycine max HOM05D005919 ORTHO05D007176 3.2e-59 233.4 189 60.3
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 4.3e-56 223.0 372 35.8
arahy.Tifrunner.gnm1.ann1.8I3VMK Arachis hypogaea HOM05D005919 ORTHO05D007176 1.2e-55 221.5 205 54.6
Sabra18G0085400 Salix brachista HOM05D005919 ORTHO05D007176 2.1e-50 204.1 141 66.0
CDE02G3325 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 6.4e-44 182.6 124 64.5
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 9.6e-40 168.7 127 66.1
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 9.9e-37 158.7 126 70.6
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 9.9e-37 158.7 430 29.5
GSVIVG01023746001 Vitis vinifera HOM05D005919 ORTHO05D007176 6.4e-28 129.4 89 62.9
Zm00001eb050560 Zea mays HOM05D005919 ORTHO05D007176 1.0e-25 122.1 107 58.9
Zm00001eb260780 Zea mays HOM05D005919 ORTHO05D007176 1.0e-25 122.1 107 58.9
Zm00001eb302550 Zea mays HOM05D005919 ORTHO05D007176 1.0e-25 122.1 107 58.9
Actinidia15384 Actinidia chinensis HOM05D005919 ORTHO05D007176 1.1e-22 112.1 86 60.5
AL1G16380 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 3.0e-17 94.0 74 56.8
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 2.6e-13 80.9 92 51.1
Migut.B01508 Erythranthe guttata HOM05D006213 ORTHO05D008107 7.4e-08 62.8 212 29.2
SMO145G0125 Selaginella moellendorffii HOM05D009274 ORTHO05D011512 7.4e-08 62.8 46 58.7
HPP92_020680 Vanilla planifolia HOM05D006213 ORTHO05D008107 2.8e-07 60.8 211 25.1
BcaC07g42336 Brassica carinata HOM05D006213 ORTHO05D008107 3.7e-07 60.5 104 35.6
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 3.7e-07 60.5 191 28.3
SalBow5G4694 Salvia bowleyana HOM05D006213 ORTHO05D008107 4.8e-07 60.1 291 27.1
Glyma.03G108200 Glycine max HOM05D006213 ORTHO05D008107 6.3e-07 59.7 210 25.7
Glyma.07G119300 Glycine max HOM05D006213 ORTHO05D008107 6.3e-07 59.7 211 26.1
Aa31LG1G11550 Aethionema arabicum HOM05D006213 ORTHO05D008107 8.2e-07 59.3 214 29.4
arahy.Tifrunner.gnm1.ann1.SKJX1Q Arachis hypogaea HOM05D006213 ORTHO05D008107 8.2e-07 59.3 236 25.8
TWI14G1148 Tripterygium wilfordii HOM05D006213 ORTHO05D008107 8.2e-07 59.3 216 29.2
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 1.1e-06 58.9 198 30.3
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 1.4e-06 58.5 216 27.3
QL04p029079 Quercus lobata HOM05D006213 ORTHO05D008107 1.4e-06 58.5 232 28.4
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 1.8e-06 58.2 192 27.6
MSTRG.20674 Avicennia marina HOM05D006213 ORTHO05D008107 1.8e-06 58.2 212 28.3
COL.COLO4_12385 Corchorus olitorius HOM05D006213 ORTHO05D008107 1.8e-06 58.2 210 27.6
Lalb_Chr12g0210581 Lupinus albus HOM05D006213 ORTHO05D008107 4.1e-06 57.0 100 30.0
Phvul.010G045600 Phaseolus vulgaris HOM05D006213 ORTHO05D008107 4.1e-06 57.0 211 26.1
CDE02G2871 Ceratophyllum demersum HOM05D006213 ORTHO05D008107 5.3e-06 56.6 211 26.1
A10p00090 Brassica napus HOM05D006213 ORTHO05D008107 6.9e-06 56.2 217 28.1
BraA10t42287Z Brassica rapa HOM05D006213 ORTHO05D008107 6.9e-06 56.2 217 28.1
Gorai.004G166900 Gossypium raimondii HOM05D006213 ORTHO05D008107 6.9e-06 56.2 282 26.2
Lj2g0022411 Lotus japonicus HOM05D006213 ORTHO05D008107 6.9e-06 56.2 100 31.0
Prupe.2G122100 Prunus persica HOM05D006213 ORTHO05D008107 6.9e-06 56.2 213 29.1
Peaxi162Scf00853g00316 Petunia axillaris HOM05D006213 ORTHO05D008107 9.1e-06 55.8 223 26.5
GSVIVG01018298001 Vitis vinifera HOM05D006213 ORTHO05D008107 9.1e-06 55.8 217 30.0


User provided reference genes

Program Settings