Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 1.3e-91 339.7 174 100.0
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 7.0e-37 157.9 176 51.1
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 1.0e-32 144.1 123 59.3
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 1.8e-32 143.3 136 55.9
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 2.3e-32 142.9 123 57.7
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 3.4e-31 139.0 175 47.4
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 1.7e-30 136.7 133 55.6
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 1.7e-30 136.7 182 46.2
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 1.7e-30 136.7 149 51.0
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 2.2e-30 136.3 175 46.3
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 2.8e-30 136.0 175 45.7
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 2.8e-30 136.0 115 57.4
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 3.7e-30 135.6 97 61.9
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 6.3e-30 134.8 99 60.6
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 8.3e-30 134.4 115 60.9
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 8.3e-30 134.4 128 55.5
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 8.3e-30 134.4 157 51.0
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 8.3e-30 134.4 93 65.6
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 1.1e-29 134.0 100 60.0
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 1.1e-29 134.0 129 55.8
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 3.1e-29 132.5 129 55.0
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 4.1e-29 132.1 92 64.1
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 4.1e-29 132.1 181 43.6
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 4.1e-29 132.1 139 52.5
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 5.4e-29 131.7 152 49.3
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 5.4e-29 131.7 152 48.0
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 9.1e-29 131.0 92 63.0
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 2.0e-28 129.8 126 55.6
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 2.7e-28 129.4 155 47.1
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 2.7e-28 129.4 134 49.3
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 3.5e-28 129.0 175 43.4
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.5e-28 129.0 175 43.4
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 3.5e-28 129.0 175 44.0
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 4.5e-28 128.6 151 47.0
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 5.9e-28 128.3 129 53.5
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 7.7e-28 127.9 145 47.6
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.0e-27 127.5 99 56.6
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.0e-27 127.5 134 49.3
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 3.8e-27 125.6 149 49.7
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 3.8e-27 125.6 149 49.0
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 3.8e-27 125.6 149 49.7
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 3.8e-27 125.6 149 49.7
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 5.0e-27 125.2 126 51.6
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 5.0e-27 125.2 132 50.0
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 5.0e-27 125.2 140 50.0
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 5.0e-27 125.2 164 42.7
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 8.6e-27 124.4 131 52.7
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 8.6e-27 124.4 156 44.2
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 8.6e-27 124.4 95 61.1
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 8.6e-27 124.4 156 48.7
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.1e-26 124.0 149 48.3
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 1.1e-26 124.0 142 48.6
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 1.9e-26 123.2 141 49.6
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 2.5e-26 122.9 95 60.0
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 4.2e-26 122.1 126 53.2
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 4.2e-26 122.1 98 60.2
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 7.2e-26 121.3 156 46.8
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 3.6e-25 119.0 128 48.4
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 3.0e-24 115.9 179 42.5
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 5.2e-24 115.2 128 46.1
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 1.3e-22 110.5 135 49.6
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 4.9e-22 108.6 122 55.7
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 8.3e-22 107.8 125 49.6
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 8.3e-22 107.8 97 56.7
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.8e-21 106.7 118 50.0
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.4e-21 106.3 98 54.1
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 3.1e-21 105.9 98 54.1
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 2.7e-20 102.8 97 53.6
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 4.5e-20 102.1 93 52.7
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 1.0e-19 100.9 138 42.0
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 2.9e-19 99.4 140 46.4
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 2.9e-19 99.4 93 53.8
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 5.0e-19 98.6 151 41.7
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 6.6e-19 98.2 91 54.9
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 8.6e-19 97.8 172 40.7
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 8.6e-19 97.8 172 40.7
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 2.5e-18 96.3 75 60.0
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 3.3e-18 95.9 153 41.2
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 5.6e-18 95.1 84 52.4
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 1.6e-17 93.6 122 45.1
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 2.8e-17 92.8 143 39.2
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 2.8e-17 92.8 126 43.7
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 6.1e-17 91.7 137 45.3
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 1.0e-16 90.9 116 47.4
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 6.8e-16 88.2 91 52.7
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 8.9e-16 87.8 131 39.7
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 7.5e-15 84.7 61 59.0
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 1.7e-14 83.6 90 51.1
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 2.2e-14 83.2 154 37.0
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 1.6e-12 77.0 116 38.8
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 6.0e-12 75.1 115 47.0
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 6.0e-12 75.1 116 45.7
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 1.7e-11 73.6 96 51.0
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 5.6e-10 68.6 120 40.8
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 9.5e-10 67.8 110 45.5
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 6.8e-08 61.6 156 35.3
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 8.9e-08 61.2 94 44.7
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 1.2e-07 60.8 89 47.2
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 2.0e-07 60.1 117 39.3
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 2.2e-06 56.6 74 50.0
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 4.9e-06 55.5 98 38.8
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 6.4e-06 55.1 83 42.2


User provided reference genes

Program Settings