Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 4.9e-111 404.4 201 100.0
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 3.2e-86 322.0 182 85.2
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 7.2e-86 320.9 181 86.2
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 3.9e-84 315.1 181 85.1
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 5.9e-80 301.2 184 77.7
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 7.7e-80 300.8 184 77.2
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 2.2e-79 299.3 181 80.1
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 3.8e-79 298.5 182 81.3
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 1.1e-78 297.0 182 80.2
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 1.9e-78 296.2 182 80.2
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 1.2e-77 293.5 181 79.6
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 2.1e-77 292.7 182 79.7
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 2.7e-77 292.4 182 76.4
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 4.7e-77 291.6 181 77.3
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 6.1e-77 291.2 181 79.0
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 1.8e-76 289.7 184 79.9
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 1.8e-76 289.7 181 77.3
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 6.7e-76 287.7 181 76.8
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 6.7e-76 287.7 181 78.5
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 6.7e-76 287.7 181 76.8
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 1.3e-74 283.5 181 76.8
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 1.7e-74 283.1 180 75.6
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 2.8e-74 282.3 208 66.8
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 4.8e-74 281.6 162 84.6
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 1.4e-73 280.0 196 70.4
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 3.1e-73 278.9 181 74.0
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 5.3e-73 278.1 176 80.7
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 5.3e-73 278.1 176 80.7
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 5.3e-73 278.1 176 80.7
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 7.0e-73 277.7 181 73.5
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 7.0e-73 277.7 181 74.0
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 1.2e-72 276.9 189 76.2
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 1.2e-72 276.9 181 72.9
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 2.0e-72 276.2 180 73.3
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 2.0e-72 276.2 181 74.6
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 2.7e-72 275.8 181 73.5
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 3.5e-72 275.4 181 74.6
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 7.7e-72 274.2 181 73.5
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 8.5e-71 270.8 181 71.3
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 2.5e-70 269.2 181 70.7
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 3.2e-70 268.9 184 71.7
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 9.4e-70 267.3 188 75.5
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 3.6e-69 265.4 181 69.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 1.0e-68 263.8 185 69.7
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 1.4e-68 263.5 181 69.6
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 2.3e-68 262.7 188 69.1
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 3.0e-68 262.3 182 70.9
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 3.0e-68 262.3 181 71.3
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 4.0e-68 261.9 181 69.1
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 4.0e-68 261.9 181 69.1
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 6.8e-68 261.2 181 69.1
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 6.8e-68 261.2 181 71.3
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 8.8e-68 260.8 181 71.3
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 8.8e-68 260.8 181 70.7
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 1.2e-67 260.4 182 70.3
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 1.5e-67 260.0 181 70.2
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 2.0e-67 259.6 191 67.5
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 4.4e-67 258.5 182 69.8
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 4.4e-67 258.5 181 70.2
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 5.7e-67 258.1 178 71.3
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 5.7e-67 258.1 182 70.3
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.5e-67 257.7 186 68.8
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 7.5e-67 257.7 181 70.7
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 7.5e-67 257.7 181 70.7
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 7.5e-67 257.7 181 70.7
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 9.8e-67 257.3 198 69.2
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 9.8e-67 257.3 181 69.1
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 1.3e-66 256.9 182 69.8
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.3e-66 256.9 182 69.8
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.3e-66 256.9 182 69.8
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 1.3e-66 256.9 182 69.8
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.7e-66 256.5 182 69.8
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 1.7e-66 256.5 181 70.7
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 1.1e-65 253.8 186 68.3
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 1.8e-65 253.1 181 71.3
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 2.0e-64 249.6 160 79.4
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 3.5e-64 248.8 183 65.0
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 4.5e-64 248.4 185 67.0
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 4.5e-64 248.4 184 66.3
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 5.9e-64 248.1 187 65.8
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 1.3e-63 246.9 182 66.5
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 1.3e-63 246.9 180 68.9
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 6.6e-63 244.6 182 64.3
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 1.9e-62 243.0 181 68.0
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 2.5e-62 242.7 181 66.3
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 9.5e-62 240.7 181 68.0
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 1.2e-61 240.4 182 64.3
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 1.2e-61 240.4 181 65.7
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 1.2e-61 240.4 178 65.7
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 2.8e-61 239.2 173 67.6
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 6.1e-61 238.0 180 61.1
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 8.0e-61 237.7 181 66.3
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 8.0e-61 237.7 167 65.3
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 1.4e-60 236.9 181 65.2
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 1.8e-60 236.5 181 65.2
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 4.0e-60 235.3 176 67.6
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 5.2e-60 235.0 181 65.7
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 5.2e-60 235.0 181 65.7
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 1.2e-59 233.8 131 84.7
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 1.5e-59 233.4 181 64.1
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 7.5e-59 231.1 182 63.2
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 7.5e-59 231.1 181 64.6
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 3.7e-58 228.8 182 63.2
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 6.3e-58 228.0 181 63.5
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 8.3e-58 227.6 182 64.8
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 1.4e-57 226.9 181 63.5
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 1.7e-55 219.9 188 60.1
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 2.9e-55 219.2 184 57.6
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 8.3e-50 201.1 190 52.1
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 1.7e-47 193.4 121 72.7
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 1.7e-47 193.4 129 78.3
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.5e-43 180.3 157 54.8
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 2.0e-35 153.3 180 50.0
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.7e-31 140.2 88 70.5
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 7.3e-30 134.8 176 39.8
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 2.2e-26 123.2 114 49.1
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 4.9e-26 122.1 142 46.5
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 3.5e-24 115.9 162 42.6
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 9.6e-22 107.8 55 85.5
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 2.6e-19 99.8 55 80.0
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 1.1e-17 94.4 50 84.0
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 1.6e-16 90.5 92 51.1
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 2.7e-16 89.7 83 60.2
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 5.1e-15 85.5 71 60.6
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 1.1e-14 84.3 198 33.3
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus HOM05D005838 ORTHO05D041122 9.9e-11 71.2 151 35.8
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 1.6e-08 63.9 64 53.1
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 4.6e-08 62.4 79 43.0
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 6.0e-08 62.0 50 62.0
BolC1t05204H Brassica oleracea HOM05D005838 ORTHO05D007177 6.0e-08 62.0 50 62.0
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 1.1e-06 57.8 79 43.0


User provided reference genes

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