Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011695 Daucus carota HOM05D005580 ORTHO05D006395 6.1e-118 427.6 224 100.0
Potri.010G203900 Populus trichocarpa HOM05D005580 ORTHO05D006395 2.2e-91 339.3 228 78.9
Potri.008G055800 Populus trichocarpa HOM05D005580 ORTHO05D006395 1.1e-90 337.0 228 77.6
Thecc.10G042400 Theobroma cacao HOM05D005580 ORTHO05D006395 4.1e-90 335.1 227 79.3
Sabra08G0040500 Salix brachista HOM05D005580 ORTHO05D006395 7.0e-90 334.3 228 76.8
Nitab4.5_0013062g0010 Nicotiana tabacum HOM05D005580 ORTHO05D006395 4.5e-89 331.6 226 79.6
Duzib128G0371 Durio zibethinus HOM05D005580 ORTHO05D006395 5.9e-89 331.3 228 78.5
TWI38G1118 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 5.9e-89 331.3 225 77.3
CSS0041204 Camellia sinensis var. sinensis HOM05D005580 ORTHO05D006395 2.9e-88 328.9 237 77.2
MD01G1134100 Malus domestica HOM05D005580 ORTHO05D006395 5.0e-88 328.2 230 76.1
QL08p059794 Quercus lobata HOM05D005580 ORTHO05D006395 6.6e-88 327.8 235 73.6
Manes.07G116200 Manihot esculenta HOM05D005580 ORTHO05D006395 1.1e-87 327.0 230 74.8
Prupe.2G235300 Prunus persica HOM05D005580 ORTHO05D006395 1.9e-87 326.2 230 78.7
FvH4_7g22470 Fragaria vesca HOM05D005580 ORTHO05D006395 2.5e-87 325.9 235 74.5
FAN03G1496 Fragaria x ananassa HOM05D005580 ORTHO05D006395 2.5e-87 325.9 235 74.5
FAN06G0736 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-87 325.5 235 74.5
FAN06G1328 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.3e-87 325.5 235 74.5
Nitab4.5_0001097g0030 Nicotiana tabacum HOM05D005580 ORTHO05D006395 3.3e-87 325.5 207 79.7
Gorai.013G022300 Gossypium raimondii HOM05D005580 ORTHO05D006395 5.6e-87 324.7 212 78.8
Lsat_1_v5_gn_2_119121 Lactuca sativa HOM05D005580 ORTHO05D006395 5.6e-87 324.7 233 77.3
RcHm_v2.0_Chr1g0367081 Rosa chinensis HOM05D005580 ORTHO05D006395 5.6e-87 324.7 235 74.0
Cpa.g.sc1.404 Carica papaya HOM05D005580 ORTHO05D006395 7.3e-87 324.3 226 73.0
FAN10G2347 Fragaria x ananassa HOM05D005580 ORTHO05D006395 7.3e-87 324.3 235 74.5
Gohir.D13G019900 Gossypium hirsutum HOM05D005580 ORTHO05D006395 7.3e-87 324.3 212 78.3
CiPaw.01G287400 Carya illinoinensis HOM05D005580 ORTHO05D006395 1.2e-86 323.6 227 75.8
vmacro07170 Vaccinium macrocarpon HOM05D005580 ORTHO05D006395 1.2e-86 323.6 224 77.7
COL.COLO4_15040 Corchorus olitorius HOM05D005580 ORTHO05D006395 2.1e-86 322.8 213 77.9
FAN01G0694 Fragaria x ananassa HOM05D005580 ORTHO05D006395 2.1e-86 322.8 235 76.2
FAN01G2215 Fragaria x ananassa HOM05D005580 ORTHO05D006395 2.1e-86 322.8 235 76.2
CANSAT56G2481 Cannabis sativa HOM05D005580 ORTHO05D006395 2.8e-86 322.4 214 76.6
Cfa001474 Carpinus fangiana HOM05D005580 ORTHO05D006395 1.0e-85 320.5 239 74.5
Gohir.A13G019300 Gossypium hirsutum HOM05D005580 ORTHO05D006395 1.0e-85 320.5 211 78.7
HanXRQChr14g0457951 Helianthus annuus HOM05D005580 ORTHO05D006395 1.8e-85 319.7 204 79.4
Oeu064380.1 Olea europaea HOM05D005580 ORTHO05D006395 1.8e-85 319.7 231 72.7
Glyma.02G091600 Glycine max HOM05D005580 ORTHO05D006395 3.0e-85 318.9 229 74.2
Rhsim03G0130700 Rhododendron simsii HOM05D005580 ORTHO05D006395 3.0e-85 318.9 217 75.6
Sed0002022 Sechium edule HOM05D005580 ORTHO05D006395 3.0e-85 318.9 211 76.8
Atru.chr12.452 Acer truncatum HOM05D005580 ORTHO05D006395 4.0e-85 318.5 211 79.1
Atru.chr12.474 Acer truncatum HOM05D005580 ORTHO05D006395 4.0e-85 318.5 211 79.1
MD07G1198300 Malus domestica HOM05D005580 ORTHO05D006395 5.2e-85 318.2 228 74.1
Sabra10G0157500 Salix brachista HOM05D005580 ORTHO05D006395 5.2e-85 318.2 229 77.3
PGSC0003DMG400023532 Solanum tuberosum HOM05D005580 ORTHO05D006395 6.8e-85 317.8 208 77.4
TWI63G0967 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 6.8e-85 317.8 227 74.4
CANSAT56G4483 Cannabis sativa HOM05D005580 ORTHO05D006395 1.2e-84 317.0 214 75.2
Solyc05g054450.1 Solanum lycopersicum HOM05D005580 ORTHO05D006395 1.5e-84 316.6 210 76.2
Sopen05g032940 Solanum pennellii HOM05D005580 ORTHO05D006395 1.5e-84 316.6 210 76.2
MELO3C021630.2 Cucumis melo HOM05D005580 ORTHO05D006395 2.0e-84 316.2 211 77.3
DCAR_027619 Daucus carota HOM05D005580 ORTHO05D006395 2.0e-84 316.2 232 72.0
Duzib106G1822 Durio zibethinus HOM05D005580 ORTHO05D006395 2.0e-84 316.2 212 77.8
Gohir.A10G218800 Gossypium hirsutum HOM05D005580 ORTHO05D006395 2.0e-84 316.2 224 76.3
ClCG09G019730 Citrullus lanatus HOM05D005580 ORTHO05D006395 3.4e-84 315.5 210 78.1
CsaV3_5G026670 Cucumis sativus L. HOM05D005580 ORTHO05D006395 4.4e-84 315.1 211 77.3
Cc02_g07860 Coffea canephora HOM05D005580 ORTHO05D006395 5.7e-84 314.7 231 75.8
Gohir.D10G228400 Gossypium hirsutum HOM05D005580 ORTHO05D006395 5.7e-84 314.7 224 75.9
Gorai.011G260800 Gossypium raimondii HOM05D005580 ORTHO05D006395 5.7e-84 314.7 224 75.9
GSVIVG01016552001 Vitis vinifera HOM05D005580 ORTHO05D006395 5.7e-84 314.7 213 78.4
VMungo1383G1027 Vigna mungo HOM05D005580 ORTHO05D006395 7.5e-84 314.3 212 74.5
Glyma.18G291400 Glycine max HOM05D005580 ORTHO05D006395 9.8e-84 313.9 231 73.2
ECA238G1104 Erigeron canadensis HOM05D005580 ORTHO05D006395 1.3e-83 313.5 200 78.5
Lalb_Chr17g0336141 Lupinus albus HOM05D005580 ORTHO05D006395 3.7e-83 312.0 229 74.7
CiPaw.02G183900 Carya illinoinensis HOM05D005580 ORTHO05D006395 1.1e-82 310.5 227 71.4
Eucgr.G02934 Eucalyptus grandis HOM05D005580 ORTHO05D006395 1.4e-82 310.1 206 74.8
Sed0020308 Sechium edule HOM05D005580 ORTHO05D006395 4.1e-82 308.5 211 76.3
Manes.10G030300 Manihot esculenta HOM05D005580 ORTHO05D006395 5.4e-82 308.1 215 74.0
Peaxi162Scf00886g00003 Petunia axillaris HOM05D005580 ORTHO05D006395 5.4e-82 308.1 206 76.7
Phvul.008G010700 Phaseolus vulgaris HOM05D005580 ORTHO05D006395 3.5e-81 305.4 206 73.8
TAR623G0785 Trochodendron aralioides HOM05D005580 ORTHO05D006395 1.3e-80 303.5 231 70.1
TAR633G1881 Trochodendron aralioides HOM05D005580 ORTHO05D006395 3.9e-80 302.0 211 72.0
Lsat_1_v5_gn_8_15580 Lactuca sativa HOM05D005580 ORTHO05D006395 2.5e-79 299.3 201 77.1
Nn2g13341 Nelumbo nucifera HOM05D005580 ORTHO05D006395 2.5e-79 299.3 214 71.5
MSTRG.8252 Avicennia marina HOM05D005580 ORTHO05D006395 3.3e-79 298.9 207 75.8
Lj8C84T10 Lonicera japonica HOM05D005580 ORTHO05D006395 3.3e-79 298.9 232 65.9
HanXRQChr02g0037481 Helianthus annuus HOM05D005580 ORTHO05D006395 9.5e-79 297.4 200 74.0
Lj1g0024567 Lotus japonicus HOM05D005580 ORTHO05D006395 9.5e-79 297.4 233 71.2
Medtr7g026320 Medicago truncatula HOM05D005580 ORTHO05D006395 9.5e-79 297.4 229 71.2
SalBow6G2402 Salvia bowleyana HOM05D005580 ORTHO05D006395 6.2e-78 294.7 207 72.9
Nn2g11101 Nelumbo nucifera HOM05D005580 ORTHO05D006395 1.4e-77 293.5 210 71.0
THA.LOC104810028 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 3.1e-77 292.4 207 71.0
Psat3g161760 Pisum sativum HOM05D005580 ORTHO05D006395 1.2e-76 290.4 231 69.3
TPR.G23775 Trifolium pratense HOM05D005580 ORTHO05D006395 1.2e-76 290.4 213 70.0
Dinv26015 Davidia involucrata HOM05D005580 ORTHO05D006395 4.4e-76 288.5 186 77.4
Ca_26455_v3 Cicer arietinum L. HOM05D005580 ORTHO05D006395 5.8e-76 288.1 213 69.5
MBI05_g22035_MAGBIO Magnolia biondii HOM05D005580 ORTHO05D006395 1.7e-75 286.6 206 71.4
Lalb_Chr10g0091641 Lupinus albus HOM05D005580 ORTHO05D006395 2.4e-74 282.7 231 68.0
PSO339G4490 Papaver somniferum HOM05D005580 ORTHO05D006395 2.0e-73 279.6 225 66.2
PGR142G3643 Punica granatum HOM05D005580 ORTHO05D006395 2.0e-73 279.6 246 67.1
MELO3C023848.2 Cucumis melo HOM05D005580 ORTHO05D006395 2.7e-73 279.3 217 67.7
PSO339G6083 Papaver somniferum HOM05D005580 ORTHO05D006395 4.6e-73 278.5 221 71.5
PSO384G2205 Papaver somniferum HOM05D005580 ORTHO05D006395 4.6e-73 278.5 225 65.8
CsaV3_5G008020 Cucumis sativus L. HOM05D005580 ORTHO05D006395 1.0e-72 277.3 213 67.1
PSO151G0057 Papaver somniferum HOM05D005580 ORTHO05D006395 1.7e-72 276.6 221 71.0
THA.LOC104824274 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 8.6e-72 274.2 217 65.4
unitig_8.g3317 Utricularia gibba HOM05D005580 ORTHO05D006395 3.3e-71 272.3 193 71.0
Os05g0459300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 5.6e-71 271.6 196 70.4
ClCG07G003270 Citrullus lanatus HOM05D005580 ORTHO05D006395 9.5e-71 270.8 225 64.0
Sc10g0001550 Simmondsia chinensis HOM05D005580 ORTHO05D006395 1.2e-70 270.4 216 67.6
HPP92_019446 Vanilla planifolia HOM05D005580 ORTHO05D006395 2.1e-70 269.6 208 65.4
ATR0559G355 Amborella trichopoda HOM05D005580 ORTHO05D006395 1.8e-69 266.5 209 66.0
THA.LOC104807715 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 2.3e-69 266.2 204 66.7
AL5G36570 Arabidopsis lyrata HOM05D005580 ORTHO05D006395 2.6e-68 262.7 202 69.3
Carub.0005s2214 Capsella rubella HOM05D005580 ORTHO05D006395 3.4e-68 262.3 201 69.2
Thhalv10010708m.g Eutrema salsugineum HOM05D005580 ORTHO05D006395 5.8e-68 261.5 202 68.3
Sed0012553 Sechium edule HOM05D005580 ORTHO05D006395 9.8e-68 260.8 207 64.7
AT3G55420 Arabidopsis thaliana HOM05D005580 ORTHO05D006395 2.2e-67 259.6 202 68.3
Sp5g07050 Schrenkiella parvula HOM05D005580 ORTHO05D006395 2.9e-67 259.2 202 67.8
A04p04530 Brassica napus HOM05D005580 ORTHO05D006395 6.4e-67 258.1 202 66.8
BcaC02g09755 Brassica carinata HOM05D005580 ORTHO05D006395 1.1e-66 257.3 202 66.8
C04p36960 Brassica napus HOM05D005580 ORTHO05D006395 1.1e-66 257.3 202 66.8
BolC4t25261H Brassica oleracea HOM05D005580 ORTHO05D006395 1.1e-66 257.3 202 66.8
BraA04t16163Z Brassica rapa HOM05D005580 ORTHO05D006395 2.4e-66 256.1 202 66.3
A09p48340 Brassica napus HOM05D005580 ORTHO05D006395 3.2e-66 255.8 228 62.3
BraA09t40286Z Brassica rapa HOM05D005580 ORTHO05D006395 3.2e-66 255.8 228 62.3
Aa31LG10G10450 Aethionema arabicum HOM05D005580 ORTHO05D006395 5.4e-66 255.0 195 68.7
C08p30460 Brassica napus HOM05D005580 ORTHO05D006395 7.1e-66 254.6 228 61.4
BolC8t50680H Brassica oleracea HOM05D005580 ORTHO05D006395 7.1e-66 254.6 228 61.8
AUR62012083 Chenopodium quinoa HOM05D005580 ORTHO05D006395 7.1e-66 254.6 196 65.8
Ah.16g102300 Amaranthus hybridus HOM05D005580 ORTHO05D006395 9.2e-66 254.2 215 61.4
BcaC07g39844 Brassica carinata HOM05D005580 ORTHO05D006395 9.2e-66 254.2 228 61.4
C08p30630 Brassica napus HOM05D005580 ORTHO05D006395 1.6e-65 253.4 228 61.4
SEGI_33908 Sequoiadendron giganteum HOM05D005580 ORTHO05D006395 5.1e-64 248.4 196 63.8
BcaB01g00102 Brassica carinata HOM05D005580 ORTHO05D006395 6.6e-64 248.1 229 60.7
Actinidia02948 Actinidia chinensis HOM05D005580 ORTHO05D006395 1.9e-63 246.5 219 63.0
Lj1P937T48 Lonicera japonica HOM05D005580 ORTHO05D006395 7.3e-63 244.6 145 83.4
CDE02G1824 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 1.2e-62 243.8 195 66.2
Dinv03047 Davidia involucrata HOM05D005580 ORTHO05D006395 2.2e-59 233.0 232 61.6
BcaC07g39859 Brassica carinata HOM05D005580 ORTHO05D006395 4.9e-59 231.9 217 58.5
Os12g0571300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 2.1e-57 226.5 200 57.0
CARHR165440 Cardamine hirsuta HOM05D005580 ORTHO05D006395 1.5e-55 220.3 161 70.8
BcaB02g08423 Brassica carinata HOM05D005580 ORTHO05D006395 5.8e-52 208.4 162 68.5
AUR62039380 Chenopodium quinoa HOM05D000020 ORTHO05D001617 1.7e-51 206.8 164 65.2
Ciclev10032947m.g Citrus clementina HOM05D005580 ORTHO05D006395 7.1e-50 201.4 122 82.8
Cc05_g01760 Coffea canephora HOM05D005580 ORTHO05D006395 1.6e-49 200.3 204 56.4
SGA_v2.0_scaffold2G01004 Striga asiatica HOM05D005580 ORTHO05D006395 9.9e-44 181.0 123 73.2
Oeu048246.1 Olea europaea HOM05D005580 ORTHO05D006395 1.9e-42 176.8 104 81.7
Aqoxy4G02929 Aquilegia oxysepala HOM05D005580 ORTHO05D006395 1.3e-40 170.6 128 71.1
SGA_v2.0_scaffold221G42666 Striga asiatica HOM05D005580 ORTHO05D006395 1.3e-40 170.6 107 75.7
CDE08G0377 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 1.7e-40 170.2 152 61.8
Migut.F01495 Erythranthe guttata HOM05D005580 ORTHO05D006395 6.2e-38 161.8 104 77.9
SEGI_21732 Sequoiadendron giganteum HOM05D003049 ORTHO05D003531 5.0e-19 99.0 62 75.8
arahy.Tifrunner.gnm1.ann1.HEV3CF Arachis hypogaea HOM05D000969 ORTHO05D011765 4.8e-14 82.4 96 49.0
Pp3c12_3400 Physcomitrium patens HOM05D000906 ORTHO05D000713 6.3e-06 55.5 153 27.5
AagrBONN_evm.TU.Sc2ySwM_368.2233 Anthoceros agrestis HOM05D025074 ORTHO05D006395 8.2e-06 55.1 147 27.9


User provided reference genes

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