Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 6.7e-181 637.5 389 100.0
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.9e-82 310.5 332 56.9
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 2.2e-78 297.0 332 55.4
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 1.0e-75 288.1 329 54.1
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 7.2e-74 282.0 327 52.6
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 2.0e-71 273.9 376 48.4
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 5.3e-69 265.8 335 51.0
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 9.1e-69 265.0 334 50.9
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 5.5e-66 255.8 325 51.1
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 1.2e-65 254.6 316 51.6
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 6.1e-65 252.3 326 48.5
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 7.9e-65 251.9 335 51.3
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 7.9e-65 251.9 335 49.6
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 1.0e-64 251.5 325 48.6
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 3.9e-64 249.6 317 50.8
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 3.9e-64 249.6 350 47.7
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 6.7e-64 248.8 331 51.4
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.5e-63 247.7 330 48.8
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 3.3e-63 246.5 335 49.6
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 1.3e-62 244.6 317 54.6
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 1.3e-62 244.6 352 49.1
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 5.3e-61 239.2 325 50.2
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 5.3e-61 239.2 361 46.0
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 1.5e-60 237.7 317 53.0
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 2.6e-60 236.9 298 56.7
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 5.9e-60 235.7 329 48.3
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 2.2e-59 233.8 299 53.5
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 3.8e-59 233.0 333 48.0
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 5.0e-59 232.6 335 47.2
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 6.5e-59 232.3 273 55.3
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 6.5e-59 232.3 342 47.1
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 8.5e-59 231.9 371 43.1
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 3.2e-58 229.9 343 47.8
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 4.2e-58 229.6 325 48.0
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 9.4e-58 228.4 311 48.9
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 1.2e-57 228.0 311 50.5
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 1.6e-57 227.6 333 46.8
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 2.1e-57 227.3 325 46.8
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 2.1e-57 227.3 326 50.3
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 1.0e-56 224.9 333 48.6
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 1.8e-56 224.2 333 49.5
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 1.8e-56 224.2 329 46.5
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 1.8e-56 224.2 301 48.8
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.3e-56 223.8 314 49.7
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 4.0e-56 223.0 325 48.0
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 5.2e-56 222.6 319 48.3
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 6.7e-56 222.2 284 52.8
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 1.1e-55 221.5 316 50.0
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 5.7e-55 219.2 338 47.3
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.7e-54 217.6 319 48.0
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 1.7e-54 217.6 325 47.7
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 1.7e-54 217.6 330 47.9
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 2.8e-54 216.9 328 44.8
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 1.4e-53 214.5 333 48.0
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 3.1e-53 213.4 303 47.9
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 4.1e-53 213.0 338 47.0
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 5.3e-53 212.6 302 49.3
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 5.3e-53 212.6 319 46.4
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 9.1e-53 211.8 305 46.9
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 3.5e-52 209.9 350 43.4
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 4.5e-52 209.5 297 51.2
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 1.0e-51 208.4 339 44.0
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.0e-51 208.4 314 50.3
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 1.3e-51 208.0 315 49.2
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 2.9e-51 206.8 335 45.4
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 2.9e-51 206.8 314 50.0
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 2.9e-51 206.8 343 45.2
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 6.5e-51 205.7 348 43.7
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 8.5e-51 205.3 335 45.1
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 8.5e-51 205.3 319 45.5
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 1.1e-50 204.9 322 46.0
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 2.7e-49 200.3 329 46.2
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 4.7e-49 199.5 340 47.4
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 4.7e-49 199.5 280 49.3
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 2.3e-48 197.2 303 44.9
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 4.0e-48 196.4 321 46.1
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 6.8e-48 195.7 334 43.7
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 6.8e-48 195.7 275 47.3
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.5e-47 194.5 311 45.7
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.0e-47 194.1 323 45.8
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 7.5e-47 192.2 273 48.0
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 1.7e-46 191.0 322 43.8
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 3.7e-46 189.9 283 46.6
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 3.7e-46 189.9 319 46.4
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 3.7e-46 189.9 277 47.3
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 6.3e-46 189.1 343 41.7
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 8.3e-46 188.7 303 45.9
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.4e-45 188.0 311 43.7
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 1.2e-44 184.9 295 45.8
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 3.5e-44 183.3 327 40.1
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 5.9e-44 182.6 309 46.6
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 1.0e-43 181.8 306 41.2
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 1.3e-43 181.4 272 50.4
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 1.1e-42 178.3 305 46.2
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 2.5e-42 177.2 294 44.6
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 4.2e-42 176.4 312 42.9
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 1.2e-41 174.9 302 44.7
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 2.1e-41 174.1 326 39.0
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.7e-41 172.9 296 42.6
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 1.5e-39 167.9 298 43.6
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 2.0e-39 167.5 286 45.8
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 9.8e-39 165.2 294 41.8
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 1.7e-38 164.5 290 43.8
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 1.7e-38 164.5 290 43.8
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 1.4e-37 161.4 373 36.7
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 9.1e-37 158.7 307 39.4
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 2.0e-36 157.5 277 39.0
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 2.3e-35 154.1 293 43.0
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 5.6e-34 149.4 274 45.6
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 1.2e-31 141.7 262 40.5
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 1.3e-30 138.3 141 55.3
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 9.5e-26 122.1 116 55.2
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 3.6e-25 120.2 277 35.7
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 8.0e-25 119.0 266 38.3
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.4e-23 113.2 99 64.6
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 8.3e-22 109.0 305 34.8
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 2.4e-21 107.5 333 30.0
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 3.2e-21 107.1 327 30.0
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 7.8e-20 102.4 347 31.4
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 1.9e-18 97.8 111 43.2
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 2.5e-18 97.4 309 35.9
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 6.8e-16 89.4 86 51.2
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 1.2e-15 88.6 295 30.2
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 2.0e-15 87.8 74 66.2
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 3.0e-11 73.9 167 35.9
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 7.3e-10 69.3 293 29.4
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 3.6e-09 67.0 142 38.0
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 3.6e-09 67.0 128 39.1
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 1.7e-06 58.2 66 51.5


User provided reference genes

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