Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011590 Daucus carota HOM05D065511 ORTHO05D009802 2.5e-93 345.5 181 100.0
DCAR_023151 Daucus carota HOM05D065511 ORTHO05D009802 7.3e-13 78.2 132 46.2
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 1.2e-10 70.9 87 50.6
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 2.9e-09 66.2 63 60.3
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 4.2e-08 62.4 135 40.0
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 4.2e-08 62.4 135 40.0
Glyma.04G157900 Glycine max HOM05D008563 ORTHO05D009956 7.1e-08 61.6 138 41.3
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 2.7e-07 59.7 136 36.0
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 2.7e-07 59.7 142 35.9
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 3.5e-07 59.3 77 50.6
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 4.6e-07 58.9 77 50.6
Lj1g0007009 Lotus japonicus HOM05D008563 ORTHO05D009802 4.6e-07 58.9 122 39.3
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 4.6e-07 58.9 141 37.6
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 4.6e-07 58.9 135 40.0
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 4.6e-07 58.9 136 36.0
DCAR_018797 Daucus carota HOM05D000122 ORTHO05D000139 6.0e-07 58.5 32 93.8
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 1.7e-06 57.0 74 50.0
Sopen06g026600 Solanum pennellii HOM05D014920 ORTHO05D009802 2.3e-06 56.6 148 39.9
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 2.3e-06 56.6 122 40.2
Solyc06g069340.1 Solanum lycopersicum HOM05D014920 ORTHO05D009802 3.9e-06 55.8 149 38.9
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 6.6e-06 55.1 142 34.5
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 6.6e-06 55.1 119 38.7
Cpa.g.sc3.202 Carica papaya HOM05D014920 ORTHO05D009802 8.7e-06 54.7 84 46.4
Ca_02709_v3 Cicer arietinum L. HOM05D008563 ORTHO05D009956 8.7e-06 54.7 75 49.3


User provided reference genes

Program Settings