Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.2e-300 1035.8 562 100.0
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 3.9e-206 721.8 613 63.1
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 6.9e-195 684.5 576 64.1
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 1.3e-193 680.2 578 62.6
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 3.8e-193 678.7 580 62.9
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.3e-189 665.6 558 62.4
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 4.3e-189 665.2 549 63.9
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 5.7e-189 664.8 567 62.8
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 9.7e-189 664.1 581 60.9
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 2.4e-187 659.4 579 61.8
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 1.2e-186 657.1 576 61.1
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 4.5e-186 655.2 564 62.6
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.7e-186 654.4 561 61.5
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.7e-185 653.3 579 60.3
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 2.2e-185 652.9 554 62.5
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 8.5e-185 651.0 585 60.9
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.5e-184 649.4 532 63.2
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 3.2e-184 649.0 555 62.0
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 7.2e-184 647.9 562 61.4
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 9.4e-184 647.5 491 67.2
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 1.2e-183 647.1 548 63.1
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.6e-183 646.7 558 61.6
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.6e-183 646.7 555 62.0
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 2.1e-183 646.4 548 61.9
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 2.1e-183 646.4 553 61.7
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 2.1e-183 646.4 555 61.6
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 2.7e-183 646.0 532 63.0
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 4.7e-183 645.2 563 61.1
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 6.1e-183 644.8 574 59.6
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.8e-182 643.3 566 60.4
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 3.0e-182 642.5 578 59.3
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 8.8e-182 641.0 576 60.1
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.1e-181 640.6 578 60.7
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.1e-181 640.6 586 58.4
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 2.0e-181 639.8 463 69.3
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 3.3e-181 639.0 541 61.9
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 4.4e-181 638.6 566 60.2
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 5.7e-181 638.3 538 62.3
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 4.8e-180 635.2 565 60.5
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 4.8e-180 635.2 576 58.9
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.1e-179 634.0 560 61.1
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 1.4e-179 633.6 540 62.6
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 5.3e-179 631.7 559 61.2
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.3e-179 631.7 578 60.0
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 5.3e-179 631.7 551 61.3
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 5.3e-179 631.7 553 60.6
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 5.3e-179 631.7 537 62.4
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 5.3e-179 631.7 565 59.8
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 7.0e-179 631.3 557 60.3
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 7.0e-179 631.3 492 66.3
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 9.1e-179 630.9 556 61.0
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.2e-178 630.6 481 67.4
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 4.5e-178 628.6 568 60.6
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 4.5e-178 628.6 570 58.9
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.3e-177 627.1 480 66.0
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.3e-177 627.1 523 63.7
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.7e-177 626.7 556 60.1
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 2.2e-177 626.3 570 58.6
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.0e-177 625.2 570 58.6
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 6.5e-177 624.8 497 64.4
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 6.5e-177 624.8 573 58.8
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.5e-176 623.6 588 58.0
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.5e-176 623.6 574 58.9
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.9e-176 623.2 573 58.5
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.5e-176 622.9 569 58.5
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.2e-176 622.5 570 58.6
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 3.2e-176 622.5 478 66.1
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 5.5e-176 621.7 547 60.7
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 5.5e-176 621.7 566 57.8
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 7.2e-176 621.3 579 57.7
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 9.4e-176 620.9 543 61.1
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 9.4e-176 620.9 489 65.6
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 9.4e-176 620.9 535 60.6
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 2.1e-175 619.8 549 61.6
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 4.7e-175 618.6 577 57.2
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 8.0e-175 617.8 568 59.7
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 8.0e-175 617.8 554 58.3
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 3.0e-174 615.9 558 59.9
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 5.2e-174 615.1 557 59.8
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 8.8e-174 614.4 488 64.3
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.1e-173 614.0 573 56.5
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.0e-173 613.2 542 60.0
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 2.6e-173 612.8 555 59.6
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 5.7e-173 611.7 527 60.2
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 5.7e-173 611.7 575 57.0
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 5.7e-173 611.7 460 68.0
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 5.7e-173 611.7 493 64.5
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 7.4e-173 611.3 460 67.4
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 9.7e-173 610.9 521 61.6
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.3e-172 610.5 567 56.3
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.8e-172 609.4 525 61.7
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 8.2e-172 607.8 502 62.9
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 1.1e-171 607.4 484 64.0
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.4e-171 607.1 562 59.3
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.8e-171 606.7 519 61.7
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.1e-171 605.9 509 61.7
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 3.1e-171 605.9 552 58.3
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 7.0e-171 604.7 541 59.1
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.6e-170 603.6 550 59.5
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.5e-170 602.4 551 57.7
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 4.5e-170 602.1 563 57.0
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 5.9e-170 601.7 553 59.3
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.3e-169 600.5 462 65.8
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 2.2e-169 599.7 493 62.3
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 2.2e-169 599.7 469 65.0
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 2.9e-169 599.4 457 66.1
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 8.5e-169 597.8 556 58.8
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 1.2e-167 594.0 573 55.8
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 2.1e-167 593.2 550 58.9
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 4.7e-167 592.0 491 61.3
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 8.0e-167 591.3 532 59.6
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.8e-166 590.1 557 57.8
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 3.0e-166 589.3 461 65.5
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 8.8e-166 587.8 572 56.8
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 8.8e-166 587.8 557 58.7
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 1.5e-165 587.0 499 62.7
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 1.5e-165 587.0 544 57.7
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.5e-165 587.0 544 57.5
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 1.5e-165 587.0 561 57.8
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 2.0e-165 586.6 544 57.4
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 3.4e-165 585.9 571 56.0
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 5.7e-165 585.1 544 57.7
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 5.7e-165 585.1 544 57.5
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 1.7e-164 583.6 531 59.9
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 1.7e-164 583.6 531 59.9
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 1.7e-164 583.6 531 59.9
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 3.7e-164 582.4 509 61.9
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 3.7e-164 582.4 509 61.9
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 7.7e-162 574.7 562 55.9
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 2.9e-161 572.8 461 64.2
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 1.2e-159 567.4 424 67.7
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 8.8e-158 561.2 447 64.0
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.6e-151 539.3 414 66.2
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 1.0e-150 537.7 494 59.9
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.5e-146 522.7 465 58.1
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 6.2e-143 511.9 547 53.4
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.9e-137 492.7 489 54.8
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 4.9e-132 475.7 407 58.2
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 7.1e-131 471.9 463 54.9
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 7.8e-130 468.4 496 52.2
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 3.5e-122 443.0 426 56.1
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 3.9e-121 439.5 403 55.6
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 9.3e-115 418.3 365 56.7
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.8e-89 334.3 303 59.4
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 7.4e-88 328.9 434 44.5
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 1.9e-83 314.3 262 59.9
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.1e-78 298.5 250 60.0
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 1.5e-72 278.1 266 56.0
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 1.5e-69 268.1 233 58.4
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.1e-62 245.4 212 59.9
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.2e-60 237.7 209 59.3
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.2e-60 237.7 209 59.3
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 6.3e-55 219.5 438 33.1
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.7e-52 211.5 234 51.3
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 5.0e-52 209.9 513 31.0
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 6.3e-47 193.0 411 31.1
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.6e-45 188.3 128 73.4
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 5.2e-41 173.3 338 32.5
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 2.5e-35 154.5 106 68.9
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.6e-34 150.6 110 66.4
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 9.2e-30 136.0 144 52.1
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 1.2e-29 135.6 238 39.1
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 3.5e-29 134.0 125 54.4
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.1e-27 129.0 96 63.5
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.0e-25 122.5 263 31.2
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 6.6e-20 103.2 96 58.3
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 3.6e-18 97.4 117 46.2
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.4e-17 95.5 141 40.4
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 8.9e-17 92.8 136 39.7
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 2.6e-16 91.3 88 56.8
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 4.9e-15 87.0 136 37.5
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 6.6e-12 76.6 155 39.4
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 4.3e-11 73.9 51 70.6
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.8e-09 68.6 161 32.3
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 7.6e-08 63.2 111 36.0
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 3.8e-07 60.8 54 59.3
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.9e-06 58.5 30 83.3


User provided reference genes

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