Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 5.3e-28 127.9 63 100.0
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 4.8e-13 78.2 63 66.7
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.5e-11 73.2 63 63.5
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 1.0e-10 70.5 67 58.2
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 2.2e-10 69.3 64 67.2
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 2.2e-10 69.3 62 56.5
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 6.5e-10 67.8 60 61.7
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.9e-09 66.2 64 64.1
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 3.2e-09 65.5 63 55.6
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 7.2e-09 64.3 62 58.1
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 9.4e-09 63.9 62 58.1
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.6e-08 63.2 62 56.5
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 3.6e-08 62.0 62 51.6
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 3.6e-08 62.0 62 50.0
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 4.7e-08 61.6 66 50.0
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 7.9e-08 60.8 68 51.5
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.0e-07 60.5 67 56.7
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.0e-07 60.5 64 54.7
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.4e-07 60.1 63 52.4
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.4e-07 60.1 63 49.2
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 1.4e-07 60.1 64 56.2
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.8e-07 59.7 64 51.6
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 2.3e-07 59.3 62 50.0
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 3.9e-07 58.5 63 50.8
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.9e-07 58.5 64 51.6
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 5.1e-07 58.2 62 54.8
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 5.1e-07 58.2 64 54.7
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 5.1e-07 58.2 63 54.0
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 6.7e-07 57.8 62 54.8
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 6.7e-07 57.8 62 50.0
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 6.7e-07 57.8 62 50.0
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 6.7e-07 57.8 62 50.0
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 6.7e-07 57.8 68 51.5
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 6.7e-07 57.8 63 50.8
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 8.8e-07 57.4 64 54.7
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 8.8e-07 57.4 62 50.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 8.8e-07 57.4 64 51.6
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.1e-06 57.0 60 58.3
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.1e-06 57.0 63 50.8
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.5e-06 56.6 64 54.7
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.5e-06 56.6 64 54.7
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 1.5e-06 56.6 67 49.3
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.0e-06 56.2 65 53.8
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 2.6e-06 55.8 57 57.9
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 2.6e-06 55.8 67 49.3
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.6e-06 55.8 63 50.8
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 5.7e-06 54.7 63 50.8
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 7.4e-06 54.3 67 46.3
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 9.7e-06 53.9 65 50.8
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 9.7e-06 53.9 62 46.8


User provided reference genes

Program Settings