Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011429 Daucus carota HOM05D054201 ORTHO05D008965 1.7e-117 426.0 218 100.0
DCAR_010225 Daucus carota HOM05D054201 ORTHO05D008965 1.5e-100 369.8 218 89.9
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 5.2e-13 79.0 220 34.1
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 6.7e-13 78.6 227 33.9
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 8.2e-11 71.6 226 31.9
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 1.1e-10 71.2 239 31.4
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 1.8e-10 70.5 221 32.1
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 1.8e-10 70.5 233 29.2
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 2.4e-10 70.1 214 33.2
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 3.1e-10 69.7 249 28.9
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 2.0e-09 67.0 203 31.5
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 2.7e-09 66.6 236 30.1
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 3.5e-09 66.2 228 31.6
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 3.5e-09 66.2 202 31.7
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 5.9e-09 65.5 234 32.1
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 5.9e-09 65.5 213 31.5
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 5.9e-09 65.5 217 29.5
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 7.7e-09 65.1 222 33.3
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.0e-08 64.7 191 30.4
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 1.0e-08 64.7 221 32.1
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.7e-08 63.9 241 26.6
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 1.7e-08 63.9 241 26.6
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 1.7e-08 63.9 206 31.6
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 1.7e-08 63.9 206 31.6
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 2.2e-08 63.5 231 28.6
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 3.8e-08 62.8 218 29.4
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 5.0e-08 62.4 243 26.7
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 6.5e-08 62.0 232 28.0
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 8.5e-08 61.6 201 32.8
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 8.5e-08 61.6 183 30.1
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 1.1e-07 61.2 154 31.8
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.9e-07 60.5 147 32.7
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 1.9e-07 60.5 193 29.5
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 1.9e-07 60.5 142 33.1
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.9e-07 60.5 222 27.9
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 2.5e-07 60.1 171 31.6
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 9.4e-07 58.2 204 28.9
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 9.4e-07 58.2 223 27.4
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 9.4e-07 58.2 223 27.4
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 9.4e-07 58.2 224 26.3
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 9.4e-07 58.2 146 33.6
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.6e-06 57.4 180 28.3
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 2.1e-06 57.0 249 28.9
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 2.1e-06 57.0 154 31.8
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 2.1e-06 57.0 156 30.8
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 2.1e-06 57.0 200 29.0
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 3.6e-06 56.2 194 28.4
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 4.7e-06 55.8 178 32.0
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 6.1e-06 55.5 145 31.7


User provided reference genes

Program Settings