Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 3.8e-58 228.0 120 100.0
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.6e-24 115.2 125 56.0
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 4.7e-24 114.8 111 59.5
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 8.0e-24 114.0 101 61.4
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 8.0e-24 114.0 127 54.3
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 1.8e-23 112.8 130 54.6
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 5.2e-23 111.3 94 62.8
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 6.7e-23 110.9 114 57.9
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 8.8e-23 110.5 95 64.2
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 1.5e-22 109.8 80 70.0
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 4.4e-22 108.2 108 55.6
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 5.7e-22 107.8 85 62.4
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 5.7e-22 107.8 78 66.7
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 5.7e-22 107.8 108 53.7
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 5.7e-22 107.8 108 53.7
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 7.5e-22 107.5 79 69.6
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 7.5e-22 107.5 85 62.4
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 9.7e-22 107.1 82 67.1
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 9.7e-22 107.1 79 67.1
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 9.7e-22 107.1 124 50.8
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 9.7e-22 107.1 78 66.7
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 1.3e-21 106.7 79 68.4
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.2e-21 105.9 113 54.9
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 2.2e-21 105.9 85 62.4
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 2.8e-21 105.5 105 54.3
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 2.8e-21 105.5 79 68.4
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 2.8e-21 105.5 88 63.6
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 4.8e-21 104.8 91 60.4
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 4.8e-21 104.8 85 64.7
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 6.3e-21 104.4 89 59.6
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 8.3e-21 104.0 89 62.9
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 1.1e-20 103.6 124 48.4
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.1e-20 103.6 124 48.4
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.8e-20 102.8 103 55.3
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 3.1e-20 102.1 86 61.6
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 4.1e-20 101.7 87 63.2
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 5.3e-20 101.3 81 65.4
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 7.0e-20 100.9 79 65.8
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 7.0e-20 100.9 87 56.3
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 9.1e-20 100.5 70 72.9
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 9.1e-20 100.5 120 47.5
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 9.1e-20 100.5 78 61.5
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 1.2e-19 100.1 73 64.4
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.2e-19 100.1 79 65.8
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 1.2e-19 100.1 120 47.5
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 2.0e-19 99.4 120 46.7
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 2.0e-19 99.4 120 46.7
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 2.0e-19 99.4 91 60.4
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.0e-19 99.4 124 46.8
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.0e-19 99.4 87 55.2
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.0e-19 99.4 82 62.2
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 2.0e-19 99.4 130 47.7
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 2.0e-19 99.4 81 61.7
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 2.7e-19 99.0 89 61.8
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.7e-19 99.0 83 61.4
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 2.7e-19 99.0 88 59.1
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 2.7e-19 99.0 88 59.1
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 2.7e-19 99.0 88 59.1
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 2.7e-19 99.0 70 68.6
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 2.7e-19 99.0 68 67.6
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 3.5e-19 98.6 92 55.4
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 3.5e-19 98.6 78 61.5
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.5e-19 98.2 124 46.8
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 4.5e-19 98.2 86 54.7
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.9e-19 97.8 124 46.0
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 5.9e-19 97.8 135 43.0
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 7.7e-19 97.4 89 53.9
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 7.7e-19 97.4 80 58.8
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 1.0e-18 97.1 120 52.5
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 1.3e-18 96.7 92 55.4
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 1.3e-18 96.7 120 52.5
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.3e-18 96.7 89 59.6
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 1.3e-18 96.7 89 60.7
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 1.7e-18 96.3 78 61.5
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 1.7e-18 96.3 88 58.0
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 2.2e-18 95.9 80 58.8
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 2.9e-18 95.5 68 63.2
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 3.8e-18 95.1 78 57.7
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 5.0e-18 94.7 70 68.6
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 5.0e-18 94.7 83 62.7
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 6.5e-18 94.4 87 57.5
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 8.5e-18 94.0 87 54.0
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 8.5e-18 94.0 85 57.6
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 1.1e-17 93.6 78 59.0
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 1.5e-17 93.2 72 65.3
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 1.9e-17 92.8 86 55.8
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 2.5e-17 92.4 101 49.5
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 2.5e-17 92.4 78 57.7
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 2.5e-17 92.4 97 55.7
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 2.5e-17 92.4 120 50.8
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 3.2e-17 92.0 93 53.8
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 3.2e-17 92.0 68 60.3
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.2e-16 90.1 83 53.0
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 1.2e-16 90.1 83 53.0
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.6e-16 89.7 74 60.8
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 2.1e-16 89.4 72 63.9
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 2.1e-16 89.4 91 57.1
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 2.7e-16 89.0 75 60.0
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 3.6e-16 88.6 86 54.7
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 6.1e-16 87.8 86 51.2
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 1.8e-15 86.3 121 43.0
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.8e-15 86.3 63 68.3
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.8e-15 86.3 63 68.3
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.8e-15 86.3 63 68.3
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 4.0e-15 85.1 86 52.3
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 5.2e-15 84.7 74 59.5
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 8.8e-15 84.0 72 59.7
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 2.0e-14 82.8 61 62.3
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 2.6e-14 82.4 60 65.0
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.8e-13 79.0 62 59.7
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 4.8e-13 78.2 60 65.0
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 6.3e-13 77.8 79 51.9
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 7.0e-12 74.3 81 44.4
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 6.6e-10 67.8 58 56.9
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 1.1e-09 67.0 45 62.2
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 8.0e-08 60.8 43 60.5
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 1.4e-07 60.1 52 59.6


User provided reference genes

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