Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011394 Daucus carota HOM05D003493 ORTHO05D003980 4.2e-284 980.7 507 100.0
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla HOM05D003493 ORTHO05D003980 3.1e-146 522.7 497 57.1
Actinidia06838 Actinidia chinensis HOM05D003493 ORTHO05D003980 1.5e-140 503.8 506 55.7
CSS0005530 Camellia sinensis var. sinensis HOM05D003493 ORTHO05D003980 1.5e-132 477.2 509 53.8
Sabra17G0126700 Salix brachista HOM05D003493 ORTHO05D003980 2.8e-126 456.4 497 50.9
vmacro17772 Vaccinium macrocarpon HOM05D003493 ORTHO05D003980 3.1e-125 453.0 434 57.4
Dinv11742 Davidia involucrata HOM05D003493 ORTHO05D003980 2.0e-124 450.3 502 51.8
Potri.017G155000 Populus trichocarpa HOM05D003493 ORTHO05D003980 9.8e-124 448.0 493 49.9
QL10p036794 Quercus lobata HOM05D003493 ORTHO05D003980 4.9e-123 445.7 501 50.3
QL10p035454 Quercus lobata HOM05D003493 ORTHO05D003980 6.4e-123 445.3 502 50.4
Lj9A410T67 Lonicera japonica HOM05D003493 ORTHO05D003980 8.3e-123 444.9 510 51.4
Prupe.5G246400 Prunus persica HOM05D003493 ORTHO05D003980 1.9e-122 443.7 500 50.2
TAR622G0755 Trochodendron aralioides HOM05D003493 ORTHO05D003980 4.1e-122 442.6 495 51.7
Manes.01G159600 Manihot esculenta HOM05D003493 ORTHO05D003980 1.6e-121 440.7 496 48.6
GSVIVG01024229001 Vitis vinifera HOM05D003493 ORTHO05D003980 7.8e-121 438.3 495 50.1
Lsat_1_v5_gn_0_10721 Lactuca sativa HOM05D003493 ORTHO05D003980 1.3e-120 437.6 491 50.7
Haze_18391 Corylus avellana HOM05D003493 ORTHO05D003980 6.6e-120 435.3 494 49.2
Manes.02G118200 Manihot esculenta HOM05D003493 ORTHO05D003980 1.9e-119 433.7 497 48.9
Atru.chr9.57 Acer truncatum HOM05D003493 ORTHO05D003980 7.3e-119 431.8 493 49.1
ECA232G4824 Erigeron canadensis HOM05D003493 ORTHO05D003980 2.8e-118 429.9 497 48.5
MD14G1000100 Malus domestica HOM05D003493 ORTHO05D003980 8.9e-117 424.9 505 47.7
Aqoxy3G04358 Aquilegia oxysepala HOM05D003493 ORTHO05D003980 5.8e-116 422.2 500 48.8
HanXRQChr15g0492171 Helianthus annuus HOM05D003493 ORTHO05D003980 8.4e-115 418.3 478 50.6
Cfa017818 Carpinus fangiana HOM05D003493 ORTHO05D003980 1.1e-114 417.9 494 47.0
RcHm_v2.0_Chr7g0176841 Rosa chinensis HOM05D003493 ORTHO05D003980 3.2e-114 416.4 499 48.5
Solyc03g019770.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 4.1e-114 416.0 486 47.9
Lj2g0009881 Lotus japonicus HOM05D003493 ORTHO05D003980 7.1e-114 415.2 498 47.0
CiPaw.16G076700 Carya illinoinensis HOM05D003493 ORTHO05D003980 1.2e-113 414.5 496 47.4
Sopen03g029860 Solanum pennellii HOM05D003493 ORTHO05D003980 4.6e-113 412.5 486 47.5
TWI81G0199 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 6.0e-113 412.1 496 48.2
Lalb_Chr14g0370061 Lupinus albus HOM05D003493 ORTHO05D003980 7.8e-113 411.8 500 47.2
Nitab4.5_0004170g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 7.8e-113 411.8 486 48.1
PGR083G2526 Punica granatum HOM05D003493 ORTHO05D003980 2.3e-112 410.2 493 47.5
Phvul.004G135600 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 3.9e-112 409.5 498 48.0
Lj5A169T97 Lonicera japonica HOM05D003493 ORTHO05D003980 6.6e-112 408.7 398 56.8
HanXRQChr08g0220881 Helianthus annuus HOM05D003493 ORTHO05D003980 1.1e-111 407.9 495 46.9
Oeu063704.1 Olea europaea HOM05D003493 ORTHO05D003980 1.1e-111 407.9 499 49.7
Eucgr.H00671 Eucalyptus grandis HOM05D003493 ORTHO05D003980 1.9e-111 407.1 499 46.5
Ca_25303_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 2.5e-111 406.8 503 45.1
Medtr6g066300 Medicago truncatula HOM05D003493 ORTHO05D003980 2.5e-111 406.8 438 50.0
TWI36G1567 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 5.6e-111 405.6 494 47.0
Glyma.09G160200 Glycine max HOM05D003493 ORTHO05D003980 9.6e-111 404.8 499 47.3
Oeu034417.1 Olea europaea HOM05D003493 ORTHO05D003980 9.6e-111 404.8 426 53.8
Nitab4.5_0003367g0050 Nicotiana tabacum HOM05D003493 ORTHO05D003980 3.6e-110 402.9 470 49.1
Glyma.16G209600 Glycine max HOM05D003493 ORTHO05D003980 4.7e-110 402.5 499 46.7
Peaxi162Scf00643g00431 Petunia axillaris HOM05D003493 ORTHO05D003980 1.8e-109 400.6 499 46.7
Nitab4.5_0000854g0120 Nicotiana tabacum HOM05D003493 ORTHO05D003980 2.4e-109 400.2 491 46.2
CAN.G861.8 Capsicum annuum HOM05D003493 ORTHO05D003980 5.2e-109 399.1 424 50.0
Sopen06g028400 Solanum pennellii HOM05D003493 ORTHO05D003980 6.8e-109 398.7 502 46.2
Gorai.009G116400 Gossypium raimondii HOM05D003493 ORTHO05D003980 2.0e-108 397.1 492 48.4
FAN08G2984 Fragaria x ananassa HOM05D003493 ORTHO05D003980 3.4e-108 396.4 502 47.4
TPR.G8860 Trifolium pratense HOM05D003493 ORTHO05D003980 4.4e-108 396.0 499 46.1
Duzib192G0928 Durio zibethinus HOM05D003493 ORTHO05D003980 5.8e-108 395.6 493 47.3
Duzib235G1490 Durio zibethinus HOM05D003493 ORTHO05D003980 5.8e-108 395.6 494 47.6
Gohir.A05G111700 Gossypium hirsutum HOM05D003493 ORTHO05D003980 9.9e-108 394.8 492 48.6
Solyc06g072110.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 9.9e-108 394.8 502 46.2
Gohir.D05G112200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.3e-107 394.4 492 48.4
Thecc.06G006900 Theobroma cacao HOM05D003493 ORTHO05D003980 2.9e-107 393.3 492 47.4
FAN04G2252 Fragaria x ananassa HOM05D003493 ORTHO05D003980 3.8e-107 392.9 501 46.3
FAN13G0815 Fragaria x ananassa HOM05D003493 ORTHO05D003980 3.8e-107 392.9 506 46.4
VMungo0464G0665 Vigna mungo HOM05D003493 ORTHO05D003980 3.8e-107 392.9 489 46.2
CAN.G65.58 Capsicum annuum HOM05D003493 ORTHO05D003980 1.9e-106 390.6 504 45.0
ClCG01G014650 Citrullus lanatus HOM05D003493 ORTHO05D003980 2.4e-106 390.2 500 44.8
FAN18G2761 Fragaria x ananassa HOM05D003493 ORTHO05D003980 2.4e-106 390.2 509 46.6
Lj5g0000329 Lotus japonicus HOM05D003493 ORTHO05D003980 3.2e-106 389.8 500 47.2
MSTRG.23219 Avicennia marina HOM05D003493 ORTHO05D003980 4.2e-106 389.4 495 47.3
FvH4_5g18670 Fragaria vesca HOM05D003493 ORTHO05D003980 4.2e-106 389.4 509 46.4
Psat1g117720 Pisum sativum HOM05D003493 ORTHO05D003980 4.2e-106 389.4 524 43.5
PSO782G2561 Papaver somniferum HOM05D003493 ORTHO05D003980 5.4e-106 389.0 475 49.7
CANSAT80G2441 Cannabis sativa HOM05D003493 ORTHO05D003980 1.2e-105 387.9 494 46.6
Migut.O00291 Erythranthe guttata HOM05D003493 ORTHO05D003980 2.1e-105 387.1 490 47.1
Sc12g0007780 Simmondsia chinensis HOM05D003493 ORTHO05D003980 4.6e-105 386.0 507 46.4
SalBow5G1620 Salvia bowleyana HOM05D003493 ORTHO05D003980 1.3e-104 384.4 488 45.5
PSO063G3260 Papaver somniferum HOM05D003493 ORTHO05D003980 1.7e-104 384.0 475 49.3
THA.LOC104812198 Tarenaya hassleriana HOM05D003493 ORTHO05D003980 2.3e-104 383.6 474 45.8
Gohir.A06G181400 Gossypium hirsutum HOM05D003493 ORTHO05D003980 3.9e-104 382.9 478 46.4
Nitab4.5_0000477g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 8.7e-104 381.7 515 44.1
Sed0011518 Sechium edule HOM05D003493 ORTHO05D003980 1.1e-103 381.3 498 44.0
SGA_v2.0_scaffold25G10715 Striga asiatica HOM05D003493 ORTHO05D003980 4.3e-103 379.4 482 46.9
Gohir.D06G188200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 5.6e-103 379.0 480 46.5
Gorai.010G220600 Gossypium raimondii HOM05D003493 ORTHO05D003980 5.6e-103 379.0 480 46.5
MBI06_g37980_MAGBIO Magnolia biondii HOM05D003493 ORTHO05D003980 1.3e-102 377.9 499 45.3
Peaxi162Scf01390g00035 Petunia axillaris HOM05D003493 ORTHO05D003980 1.6e-102 377.5 488 45.3
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea HOM05D003493 ORTHO05D003980 2.8e-102 376.7 491 43.6
MELO3C002186.2 Cucumis melo HOM05D003493 ORTHO05D003980 2.4e-101 373.6 496 45.8
Phvul.L006701 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 2.6e-100 370.2 488 44.7
CsaV3_1G007680 Cucumis sativus L. HOM05D003493 ORTHO05D003980 7.6e-100 368.6 496 45.2
Sp1g15900 Schrenkiella parvula HOM05D003493 ORTHO05D003980 9.9e-100 368.2 496 41.7
Sp5g28170 Schrenkiella parvula HOM05D003493 ORTHO05D003980 1.3e-99 367.9 486 42.8
Psat6g054360 Pisum sativum HOM05D003493 ORTHO05D003980 1.7e-99 367.5 509 43.6
Thhalv10018153m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 3.8e-99 366.3 489 41.3
CARHR018430 Cardamine hirsuta HOM05D003493 ORTHO05D003980 1.4e-98 364.4 498 42.6
CARHR066210 Cardamine hirsuta HOM05D003493 ORTHO05D003980 9.3e-98 361.7 502 40.4
AL1G30180 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 1.2e-97 361.3 505 43.0
VMungo0720G0805 Vigna mungo HOM05D003493 ORTHO05D003980 1.2e-97 361.3 487 43.9
BolC2t09128H Brassica oleracea HOM05D003493 ORTHO05D003980 2.1e-97 360.5 496 42.7
Lalb_Chr06g0168711 Lupinus albus HOM05D003493 ORTHO05D003980 2.7e-97 360.1 509 43.8
PGSC0003DMG400015207 Solanum tuberosum HOM05D003493 ORTHO05D003980 2.7e-97 360.1 358 53.9
Lalb_Chr21g0311711 Lupinus albus HOM05D003493 ORTHO05D003980 3.5e-97 359.8 508 43.3
Carub.0001s1755 Capsella rubella HOM05D003493 ORTHO05D003980 4.6e-97 359.4 499 41.1
A02p18540 Brassica napus HOM05D003493 ORTHO05D003980 1.0e-96 358.2 478 43.5
TPR.G8876 Trifolium pratense HOM05D003493 ORTHO05D003980 1.3e-96 357.8 504 43.5
Glyma.10G174700 Glycine max HOM05D003493 ORTHO05D003980 1.7e-96 357.5 493 43.4
Carub.0002s1999 Capsella rubella HOM05D003493 ORTHO05D003980 3.0e-96 356.7 492 41.3
BraA02t06893Z Brassica rapa HOM05D003493 ORTHO05D003980 6.6e-96 355.5 481 43.0
C02p30730 Brassica napus HOM05D003493 ORTHO05D003980 4.3e-95 352.8 495 41.6
Cc04_g13620 Coffea canephora HOM05D003493 ORTHO05D003980 3.6e-94 349.7 358 53.4
AT1G17820 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 6.2e-94 349.0 507 41.4
Thhalv10006829m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 6.2e-94 349.0 506 41.1
AT1G73200 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 1.1e-93 348.2 495 41.6
AL2G32970 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 3.1e-93 346.7 501 41.1
Medtr1g077470 Medicago truncatula HOM05D003493 ORTHO05D003980 3.1e-93 346.7 505 42.0
Aa31LG4G3480 Aethionema arabicum HOM05D003493 ORTHO05D003980 1.2e-92 344.7 511 38.4
C05p16200 Brassica napus HOM05D003493 ORTHO05D003980 9.9e-92 341.7 492 42.1
BolC5t30322H Brassica oleracea HOM05D003493 ORTHO05D003980 1.7e-91 340.9 494 42.1
BolC6t39773H Brassica oleracea HOM05D003493 ORTHO05D003980 1.7e-91 340.9 484 40.3
C06p47340 Brassica napus HOM05D003493 ORTHO05D003980 1.4e-90 337.8 484 39.9
Zm00001eb190790 Zea mays HOM05D003493 ORTHO05D003980 1.2e-89 334.7 510 41.4
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea HOM05D003493 ORTHO05D003980 2.1e-89 334.0 543 38.3
BraA06t24529Z Brassica rapa HOM05D003493 ORTHO05D003980 3.5e-89 333.2 502 40.8
A07p39150 Brassica napus HOM05D003493 ORTHO05D003980 4.6e-89 332.8 484 39.7
BcaC07g41354 Brassica carinata HOM05D003493 ORTHO05D003980 6.0e-89 332.4 504 40.5
ATR0124G004 Amborella trichopoda HOM05D003493 ORTHO05D003980 1.0e-88 331.6 501 40.9
A06p13880 Brassica napus HOM05D003493 ORTHO05D003980 1.3e-88 331.3 500 40.6
C08p43630 Brassica napus HOM05D003493 ORTHO05D003980 1.3e-88 331.3 495 40.8
BolC8t51909H Brassica oleracea HOM05D003493 ORTHO05D003980 1.3e-88 331.3 495 40.8
BraA07t31464Z Brassica rapa HOM05D003493 ORTHO05D003980 1.3e-88 331.3 484 39.5
Aa31LG7G2640 Aethionema arabicum HOM05D003493 ORTHO05D003980 3.0e-88 330.1 526 38.0
BcaB07g34006 Brassica carinata HOM05D003493 ORTHO05D003980 6.7e-88 328.9 428 43.5
BraA09t41388Z Brassica rapa HOM05D003493 ORTHO05D003980 5.6e-87 325.9 472 41.1
arahy.Tifrunner.gnm1.ann1.W0PAIX Arachis hypogaea HOM05D003493 ORTHO05D003980 9.6e-87 325.1 509 39.7
Ca_09923_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 4.8e-86 322.8 394 47.2
A09p60190 Brassica napus HOM05D003493 ORTHO05D003980 6.2e-86 322.4 472 41.1
Nn3g18516 Nelumbo nucifera HOM05D003493 ORTHO05D003980 2.6e-84 317.0 351 50.4
AUR62041605 Chenopodium quinoa HOM05D003493 ORTHO05D003980 2.2e-83 313.9 496 40.7
arahy.Tifrunner.gnm1.ann1.K1F8KI Arachis hypogaea HOM05D003493 ORTHO05D003980 2.3e-80 303.9 551 36.5
EL10Ac8g19467 Beta vulgaris HOM05D003493 ORTHO05D003980 2.5e-79 300.4 499 39.5
CiPaw.15G108700 Carya illinoinensis HOM05D003493 ORTHO05D003980 1.5e-76 291.2 387 47.5
Hund06742 Selenicereus undatus HOM05D003493 ORTHO05D001641 1.6e-73 281.2 606 34.5
Lj9C232G5 Lonicera japonica HOM05D003493 ORTHO05D003980 8.7e-72 275.4 323 50.2
CDE04G1302 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 3.3e-71 273.5 484 35.7
BcaNung05482 Brassica carinata HOM05D003493 ORTHO05D003980 9.7e-71 271.9 470 37.4
Zm00001eb228970 Zea mays HOM05D003493 ORTHO05D003980 1.4e-69 268.1 497 36.4
CDE07G1702 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 1.0e-67 261.9 498 34.5
Potri.018G152400 Populus trichocarpa HOM05D003493 ORTHO05D003980 1.4e-61 241.5 277 50.5
Ciclev10019478m.g Citrus clementina HOM05D003493 ORTHO05D003980 3.1e-61 240.4 272 50.0
SEGI_25111 Sequoiadendron giganteum HOM05D003493 ORTHO05D003980 2.2e-59 234.2 460 35.9
PGSC0003DMG400027062 Solanum tuberosum HOM05D003493 ORTHO05D003980 3.5e-52 210.3 280 45.0
AUR62040635 Chenopodium quinoa HOM05D003493 ORTHO05D003980 1.8e-48 198.0 319 39.8
Os02g0827500 Oryza sativa ssp. japonica HOM05D003493 ORTHO05D003980 4.0e-48 196.8 288 43.1
AagrBONN_evm.TU.Sc2ySwM_368.2475 Anthoceros agrestis HOM05D003493 ORTHO05D003980 1.1e-47 195.3 426 33.1
Mapoly0036s0110 Marchantia polymorpha HOM05D003493 ORTHO05D003980 1.4e-45 188.3 516 29.8
arahy.Tifrunner.gnm1.ann1.28MV8S Arachis hypogaea HOM05D003493 ORTHO05D003980 5.7e-39 166.4 170 50.6
Pp3c14_11980 Physcomitrium patens HOM05D003493 ORTHO05D003980 6.3e-38 162.9 540 27.0
SMO361G0167 Selaginella moellendorffii HOM05D003493 ORTHO05D003980 1.2e-36 158.7 464 29.1
COL.COLO4_22900 Corchorus olitorius HOM05D003493 ORTHO05D003980 1.6e-36 158.3 217 43.8
Pp3c1_25660 Physcomitrium patens HOM05D003493 ORTHO05D003980 5.9e-36 156.4 499 26.7
arahy.Tifrunner.gnm1.ann1.I3UW9X Arachis hypogaea HOM05D003493 ORTHO05D003980 1.0e-35 155.6 242 40.9
arahy.Tifrunner.gnm1.ann1.XZC4F6 Arachis hypogaea HOM05D003493 ORTHO05D003980 5.0e-35 153.3 349 33.2
arahy.Tifrunner.gnm1.ann1.Y1U1WE Arachis hypogaea HOM05D003493 ORTHO05D003980 2.5e-34 151.0 145 53.1
Pp3c17_10430 Physcomitrium patens HOM05D003493 ORTHO05D003980 8.0e-33 146.0 495 26.5
Gohir.A05G111401 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.2e-31 142.1 299 34.8
Rhsim05G0011100 Rhododendron simsii HOM05D003493 ORTHO05D003980 2.0e-28 131.3 116 52.6
Pp3c5_12280 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.3e-27 128.6 531 25.6
Pp3c6_14220 Physcomitrium patens HOM05D003493 ORTHO05D003980 5.0e-27 126.7 453 26.0
Cpa.g.c43819 Carica papaya HOM05D003493 ORTHO05D003980 6.6e-27 126.3 119 50.4
Hund22361 Selenicereus undatus HOM05D003493 ORTHO05D003980 1.5e-23 115.2 124 49.2
arahy.Tifrunner.gnm1.ann1.LRB6U9 Arachis hypogaea HOM05D003493 ORTHO05D003980 1.3e-22 112.1 149 42.3
CAN.G14.48 Capsicum annuum HOM05D003493 ORTHO05D003980 8.0e-17 92.8 156 41.0
arahy.Tifrunner.gnm1.ann1.3LZL4F Arachis hypogaea HOM05D003493 ORTHO05D003980 5.2e-16 90.1 141 36.9
AUR62040636 Chenopodium quinoa HOM05D003493 ORTHO05D003980 2.6e-15 87.8 146 40.4
Peaxi162Scf00050g00625 Petunia axillaris HOM05D000386 ORTHO05D000406 3.4e-15 87.4 93 46.2
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 2.4e-13 81.3 135 39.3
arahy.Tifrunner.gnm1.ann1.HH6FHR Arachis hypogaea HOM05D003493 ORTHO05D003980 7.0e-13 79.7 78 47.4
CAN.G852.8 Capsicum annuum HOM05D003493 ORTHO05D003980 1.0e-11 75.9 64 56.2


User provided reference genes

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