Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011371 Daucus carota HOM05D004238 ORTHO05D004934 2.8e-288 994.6 511 100.0
DCAR_011373 Daucus carota HOM05D004238 ORTHO05D004934 1.1e-178 630.6 351 91.7
DCAR_024088 Daucus carota HOM05D004238 ORTHO05D004934 1.1e-167 594.0 328 92.7
DCAR_015154 Daucus carota HOM05D004238 ORTHO05D004934 3.6e-158 562.4 351 81.2
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 1.5e-151 540.4 351 76.6
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 1.5e-151 540.4 351 76.9
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 1.8e-149 533.5 350 75.1
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 1.2e-148 530.8 351 75.2
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 3.4e-148 529.3 351 74.9
Thecc.03G040700 Theobroma cacao HOM05D004238 ORTHO05D004934 1.9e-146 523.5 351 74.9
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 5.4e-146 521.9 351 74.4
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 9.2e-146 521.2 351 74.4
Nitab4.5_0001986g0030 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.6e-145 520.4 351 73.8
Peaxi162Scf00683g00158 Petunia axillaris HOM05D004238 ORTHO05D004934 1.6e-145 520.4 351 74.4
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 3.5e-145 519.2 366 72.7
Nitab4.5_0004028g0040 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.0e-144 517.7 351 73.5
COL.COLO4_20838 Corchorus olitorius HOM05D004238 ORTHO05D004934 1.3e-144 517.3 351 74.6
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 1.3e-144 517.3 350 74.0
PGSC0003DMG400005732 Solanum tuberosum HOM05D004238 ORTHO05D004934 2.3e-144 516.5 351 73.5
CAN.G1129.11 Capsicum annuum HOM05D004238 ORTHO05D004934 3.0e-144 516.2 351 73.5
Solyc03g119200.4 Solanum lycopersicum HOM05D004238 ORTHO05D004934 3.9e-144 515.8 351 72.9
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 1.1e-143 514.2 351 73.5
FAN13G1096 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.3e-143 512.7 350 73.7
TAR535G0010 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.3e-143 512.7 351 72.6
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 5.6e-143 511.9 351 73.2
Gohir.D07G071400 Gossypium hirsutum HOM05D004238 ORTHO05D004934 7.3e-143 511.5 348 74.4
RcHm_v2.0_Chr7g0179451 Rosa chinensis HOM05D004238 ORTHO05D004934 9.5e-143 511.1 350 73.4
TAR371G0763 Trochodendron aralioides HOM05D004238 ORTHO05D004934 9.5e-143 511.1 351 73.8
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 1.6e-142 510.4 351 72.6
TAR426G0005 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.6e-142 509.2 349 72.8
FAN18G3483 Fragaria x ananassa HOM05D004238 ORTHO05D004934 6.2e-142 508.4 350 73.4
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 1.1e-141 507.7 375 70.4
Cpa.g.sc3.467 Carica papaya HOM05D004238 ORTHO05D004934 1.4e-141 507.3 351 72.4
PSO017G2643 Papaver somniferum HOM05D004238 ORTHO05D004934 4.0e-141 505.8 351 71.5
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 6.8e-141 505.0 351 70.7
FvH4_5g16670 Fragaria vesca HOM05D004238 ORTHO05D004934 6.8e-141 505.0 347 73.2
Cc04_g06880 Coffea canephora HOM05D004238 ORTHO05D004934 8.9e-141 504.6 351 71.8
Prupe.5G224400 Prunus persica HOM05D004238 ORTHO05D004934 1.2e-140 504.2 350 72.9
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 3.4e-140 502.7 396 65.4
Potri.012G054200 Populus trichocarpa HOM05D004238 ORTHO05D004934 4.4e-140 502.3 350 73.4
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 7.6e-140 501.5 347 71.5
FAN08G0774 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.3e-139 500.7 363 70.8
Migut.I00409 Erythranthe guttata HOM05D004238 ORTHO05D004934 2.9e-139 499.6 351 71.5
Sabra12G0038000 Salix brachista HOM05D004238 ORTHO05D004934 3.8e-139 499.2 350 72.0
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 3.8e-139 499.2 351 71.2
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 6.4e-139 498.4 374 68.2
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 8.4e-139 498.0 350 71.1
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 1.1e-138 497.7 350 71.1
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 1.4e-138 497.3 351 70.9
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 1.4e-138 497.3 351 70.4
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 1.9e-138 496.9 351 71.5
PSO478G0260 Papaver somniferum HOM05D004238 ORTHO05D004934 1.9e-138 496.9 398 64.1
ClCG06G014610 Citrullus lanatus HOM05D004238 ORTHO05D004934 2.4e-138 496.5 351 70.7
MELO3C017324.2 Cucumis melo HOM05D004238 ORTHO05D004934 5.4e-138 495.4 351 69.5
Lsat_1_v5_gn_8_143241 Lactuca sativa HOM05D004238 ORTHO05D004934 5.4e-138 495.4 360 70.0
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 2.1e-137 493.4 350 70.0
Sed0011571 Sechium edule HOM05D004238 ORTHO05D004934 3.5e-137 492.7 351 70.1
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 4.6e-137 492.3 351 70.9
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 6.0e-137 491.9 351 71.2
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 6.0e-137 491.9 351 70.4
MBI09_g25158_MAGBIO Magnolia biondii HOM05D004238 ORTHO05D004934 6.0e-137 491.9 350 70.0
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 6.0e-137 491.9 350 70.9
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.0e-136 491.1 351 70.9
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 1.3e-136 490.7 351 70.1
CsaV3_1G004010 Cucumis sativus L. HOM05D004238 ORTHO05D004934 8.6e-136 488.0 351 68.9
MSTRG.11313 Avicennia marina HOM05D004238 ORTHO05D004934 1.1e-135 487.6 351 70.4
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 1.5e-135 487.3 381 66.7
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 1.5e-135 487.3 381 66.7
Gorai.001G075300 Gossypium raimondii HOM05D004238 ORTHO05D004934 9.6e-135 484.6 329 74.8
HanXRQChr17g0559411 Helianthus annuus HOM05D004238 ORTHO05D004934 1.6e-134 483.8 350 70.6
A05p31380 Brassica napus HOM05D004238 ORTHO05D004934 2.1e-134 483.4 351 68.7
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 3.6e-134 482.6 351 68.1
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 4.7e-134 482.3 351 68.1
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 8.1e-134 481.5 351 68.1
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 8.1e-134 481.5 351 68.4
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 2.4e-133 479.9 351 67.5
FAN04G1535 Fragaria x ananassa HOM05D004238 ORTHO05D004934 4.0e-133 479.2 350 70.6
Sc04g0003400 Simmondsia chinensis HOM05D004238 ORTHO05D004934 1.3e-131 474.2 349 67.9
AT3G18270 Arabidopsis thaliana HOM05D004238 ORTHO05D004934 2.9e-131 473.0 351 68.1
Thhalv10020846m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 2.9e-131 473.0 351 67.2
ATR0807G117 Amborella trichopoda HOM05D004238 ORTHO05D004934 3.8e-131 472.6 351 67.2
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 1.1e-130 471.1 346 67.9
AL3G31500 Arabidopsis lyrata HOM05D004238 ORTHO05D004934 3.2e-130 469.5 351 67.2
THA.LOC104820382 Tarenaya hassleriana HOM05D004238 ORTHO05D004934 1.2e-129 467.6 351 66.4
Aa31LG8G5120 Aethionema arabicum HOM05D004238 ORTHO05D004934 7.8e-129 464.9 349 66.2
HPP92_008849 Vanilla planifolia HOM05D004238 ORTHO05D004934 3.9e-128 462.6 351 65.0
Dinv34796 Davidia involucrata HOM05D004238 ORTHO05D004934 1.9e-127 460.3 352 63.4
Os01g0138900 Oryza sativa ssp. japonica HOM05D004238 ORTHO05D004934 1.8e-125 453.8 349 65.9
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 5.8e-124 448.7 351 66.1
Atru.chr1.1618 Acer truncatum HOM05D004238 ORTHO05D004934 3.2e-122 443.0 351 63.5
Manes.02G071200 Manihot esculenta HOM05D004238 ORTHO05D004934 1.0e-120 438.0 351 61.3
DCAR_011370 Daucus carota HOM05D004238 ORTHO05D004934 1.8e-120 437.2 396 60.4
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 5.1e-120 435.6 350 65.1
Duzib138G0550 Durio zibethinus HOM05D004238 ORTHO05D004934 2.5e-119 433.3 353 61.8
DCAR_011367 Daucus carota HOM05D004238 ORTHO05D004934 3.3e-119 433.0 343 64.7
Ciclev10011789m.g Citrus clementina HOM05D004238 ORTHO05D004934 1.1e-117 427.9 351 60.1
CiPaw.15G135000 Carya illinoinensis HOM05D004238 ORTHO05D004934 2.4e-117 426.8 283 75.3
Thecc.04G129000 Theobroma cacao HOM05D004238 ORTHO05D004934 3.4e-116 422.9 351 60.7
Gohir.D11G171700 Gossypium hirsutum HOM05D004238 ORTHO05D004934 3.2e-114 416.4 351 58.7
CDE08G0051 Ceratophyllum demersum HOM05D004238 ORTHO05D004934 6.0e-113 412.1 347 60.5
DCAR_011366 Daucus carota HOM05D004238 ORTHO05D004934 7.9e-113 411.8 347 62.8
COL.COLO4_09370 Corchorus olitorius HOM05D004238 ORTHO05D004934 3.9e-112 409.5 354 59.3
Gohir.A11G165600 Gossypium hirsutum HOM05D004238 ORTHO05D004934 6.7e-112 408.7 351 57.8
Sp3g16390 Schrenkiella parvula HOM05D004238 ORTHO05D004934 7.6e-108 395.2 354 59.3
CANSAT78G0772 Cannabis sativa HOM05D004238 ORTHO05D004934 1.1e-106 391.3 351 56.4
Gohir.A07G066800 Gossypium hirsutum HOM05D004238 ORTHO05D004934 2.5e-106 390.2 266 72.9
Pp3c2_34370 Physcomitrium patens HOM05D004238 ORTHO05D004934 1.6e-105 387.5 345 57.1
Cpa.g.sc170.33 Carica papaya HOM05D004238 ORTHO05D004934 4.6e-105 386.0 351 55.3
Mapoly0058s0107 Marchantia polymorpha HOM05D004238 ORTHO05D004934 7.9e-105 385.2 350 56.3
CsaV3_2G033830 Cucumis sativus L. HOM05D004238 ORTHO05D004934 1.5e-103 380.9 351 54.7
HPP92_008863 Vanilla planifolia HOM05D004238 ORTHO05D004934 3.3e-103 379.8 352 56.8
SMO146G0383 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 4.8e-102 375.9 338 55.9
ClCG11G007750 Citrullus lanatus HOM05D004238 ORTHO05D004934 1.5e-100 370.9 362 52.2
ECA233G1745 Erigeron canadensis HOM05D004238 ORTHO05D004934 1.5e-92 344.4 351 54.4
Zm00001eb335570 Zea mays HOM05D004238 ORTHO05D004934 6.5e-91 339.0 245 69.8
Zm00001eb124820 Zea mays HOM05D004238 ORTHO05D004934 7.9e-89 332.0 238 69.7
DCAR_000177 Daucus carota HOM05D004238 ORTHO05D004934 1.0e-88 331.6 205 80.5
SMO146G0146 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 2.4e-85 320.5 343 51.9
Eucgr.B00826 Eucalyptus grandis HOM05D004238 ORTHO05D004934 1.1e-82 311.6 347 50.4
Potri.015G044400 Populus trichocarpa HOM05D004238 ORTHO05D004934 8.8e-80 302.0 296 57.1
CARHR093620 Cardamine hirsuta HOM05D004238 ORTHO05D004934 1.4e-77 294.7 207 69.6
Nn2g15201 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.2e-71 275.0 202 71.3
DCAR_011376 Daucus carota HOM05D004238 ORTHO05D004934 3.6e-65 253.4 187 67.4
PRCOL_00000826 Prasinoderma coloniale HOM05D004238 ORTHO05D004934 2.4e-53 214.2 311 39.2
TAR371G0419 Trochodendron aralioides HOM05D004238 ORTHO05D004934 1.4e-48 198.4 149 66.4
DCAR_000092 Daucus carota HOM05D004238 ORTHO05D004934 1.7e-46 191.4 111 86.5
Duzib205G0622 Durio zibethinus HOM05D004238 ORTHO05D004934 5.2e-40 169.9 189 51.3
Psat5g132800 Pisum sativum HOM05D004238 ORTHO05D004934 3.7e-38 163.7 116 69.8
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 7.8e-36 156.0 157 56.1
MELO3C008155.2 Cucumis melo HOM05D004238 ORTHO05D004934 3.3e-34 150.6 146 49.3
Atru.chr12.656 Acer truncatum HOM05D004238 ORTHO05D004934 7.3e-34 149.4 116 62.9
AagrBONN_evm.TU.Sc2ySwM_117.3507 Anthoceros agrestis HOM05D004238 ORTHO05D004934 7.3e-34 149.4 136 52.2
Atru.chr12.683 Acer truncatum HOM05D004238 ORTHO05D004934 8.1e-33 146.0 112 62.5
Sabra15G0040700 Salix brachista HOM05D004238 ORTHO05D004934 2.9e-30 137.5 122 59.0
Lalb_Chr00c06g0404671 Lupinus albus HOM05D004238 ORTHO05D004934 3.7e-30 137.1 108 61.1
arahy.Tifrunner.gnm1.ann1.78LW43 Arachis hypogaea HOM05D004238 ORTHO05D004934 7.1e-29 132.9 122 55.7
TPR.G26740 Trifolium pratense HOM05D004238 ORTHO05D004934 4.6e-28 130.2 110 63.6
arahy.Tifrunner.gnm1.ann1.8NU3PL Arachis hypogaea HOM05D004238 ORTHO05D004934 1.0e-27 129.0 108 60.2
Sed0014968 Sechium edule HOM05D004238 ORTHO05D004934 4.3e-26 123.6 99 64.6
C05p38610 Brassica napus HOM05D004238 ORTHO05D004934 9.5e-26 122.5 97 64.9
arahy.Tifrunner.gnm1.ann1.K93WBA Arachis hypogaea HOM05D004238 ORTHO05D004934 4.7e-25 120.2 98 60.2
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 1.5e-23 115.2 91 65.9
Pp3s30_460 Physcomitrium patens HOM05D019034 ORTHO05D004934 1.2e-20 105.5 329 25.8
Psat0s1333g0160 Pisum sativum HOM05D004238 ORTHO05D004934 1.2e-20 105.5 79 67.1
BolC5t32601H Brassica oleracea HOM05D004238 ORTHO05D004934 1.6e-20 105.1 84 63.1
Pp3s30_70 Physcomitrium patens HOM05D004238 ORTHO05D004934 2.1e-20 104.8 329 26.1
Nn4g22334 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.0e-19 102.4 73 72.6
BcaC08g44328 Brassica carinata HOM05D004238 ORTHO05D004934 1.9e-18 98.2 75 64.0
C06p17530 Brassica napus HOM05D004238 ORTHO05D004934 1.9e-18 98.2 75 64.0
SEGI_36538 Sequoiadendron giganteum HOM05D004238 ORTHO05D004934 7.3e-18 96.3 117 45.3
Zm00001eb084840 Zea mays HOM05D004238 ORTHO05D004934 3.1e-16 90.9 73 61.6
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 2.6e-15 87.8 91 54.9
arahy.Tifrunner.gnm1.ann1.QA2PAR Arachis hypogaea HOM05D004238 ORTHO05D004934 9.9e-15 85.9 74 58.1
Nn4g22335 Nelumbo nucifera HOM05D004238 ORTHO05D004934 6.4e-14 83.2 63 69.8
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 4.2e-13 80.5 62 64.5
BcaC08g45100 Brassica carinata HOM05D004238 ORTHO05D004934 4.2e-13 80.5 62 64.5
BolC6t37880H Brassica oleracea HOM05D004238 ORTHO05D004934 4.2e-13 80.5 62 64.5
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 4.2e-13 80.5 62 64.5
Solyc08g045760.1 Solanum lycopersicum HOM05D004238 ORTHO05D004934 5.4e-13 80.1 66 60.6
Atru.chr12.682 Acer truncatum HOM05D004238 ORTHO05D004934 9.3e-13 79.3 64 64.1
BcaC06g36376 Brassica carinata HOM05D004238 ORTHO05D004934 2.7e-12 77.8 62 64.5
Dinv00811 Davidia involucrata HOM05D004238 ORTHO05D004934 8.7e-11 72.8 141 34.0
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 7.3e-10 69.7 58 56.9
BolC6t36947H Brassica oleracea HOM05D004238 ORTHO05D004934 9.6e-10 69.3 58 60.3
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 1.3e-09 68.9 57 59.6
VMungo1127G1492 Vigna mungo HOM05D000769 ORTHO05D000598 3.1e-08 64.3 71 46.5
Pp3c9_10620 Physcomitrium patens HOM05D003438 ORTHO05D004235 4.0e-08 63.9 319 27.0
Dinv16582 Davidia involucrata HOM05D003438 ORTHO05D004235 2.0e-07 61.6 339 26.0
Zm00001eb312660 Zea mays HOM05D004238 ORTHO05D004934 3.4e-07 60.8 75 41.3
Psat4g113520 Pisum sativum HOM05D003438 ORTHO05D004235 9.9e-07 59.3 378 24.6
Hma1.2p1_0762F.1_g214440 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 4.9e-06 57.0 333 25.2
Hma1.2p1_0762F.1_g214450 Hydrangea macrophylla HOM05D003438 ORTHO05D004235 4.9e-06 57.0 333 25.2
Medtr8g069840 Medicago truncatula HOM05D003438 ORTHO05D004235 4.9e-06 57.0 370 25.9


User provided reference genes

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