Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011366 Daucus carota HOM05D004238 ORTHO05D004934 1.5e-206 722.6 373 100.0
DCAR_015154 Daucus carota HOM05D004238 ORTHO05D004934 3.4e-121 439.1 354 65.3
DCAR_011370 Daucus carota HOM05D004238 ORTHO05D004934 1.3e-120 437.2 396 57.3
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 8.6e-117 424.5 354 61.6
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 1.9e-116 423.3 354 61.9
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 3.6e-115 419.1 354 61.6
DCAR_011373 Daucus carota HOM05D004238 ORTHO05D004934 3.4e-113 412.5 357 61.9
RcHm_v2.0_Chr7g0179451 Rosa chinensis HOM05D004238 ORTHO05D004934 4.4e-113 412.1 354 61.6
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 5.7e-113 411.8 354 61.0
DCAR_011371 Daucus carota HOM05D004238 ORTHO05D004934 5.7e-113 411.8 347 62.8
PSO017G2643 Papaver somniferum HOM05D004238 ORTHO05D004934 9.8e-113 411.0 354 61.0
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 1.7e-112 410.2 354 60.7
Cpa.g.sc3.467 Carica papaya HOM05D004238 ORTHO05D004934 3.7e-112 409.1 356 59.3
FAN13G1096 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.7e-112 409.1 354 60.7
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 3.7e-112 409.1 354 60.5
Migut.I00409 Erythranthe guttata HOM05D004238 ORTHO05D004934 8.3e-112 407.9 355 59.4
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 1.1e-111 407.5 354 59.9
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 5.4e-111 405.2 366 59.8
FAN18G3483 Fragaria x ananassa HOM05D004238 ORTHO05D004934 5.4e-111 405.2 354 60.5
Peaxi162Scf00683g00158 Petunia axillaris HOM05D004238 ORTHO05D004934 5.4e-111 405.2 356 59.3
CAN.G1129.11 Capsicum annuum HOM05D004238 ORTHO05D004934 7.0e-111 404.8 356 58.7
HanXRQChr17g0559411 Helianthus annuus HOM05D004238 ORTHO05D004934 9.2e-111 404.4 364 58.8
Solyc03g119200.4 Solanum lycopersicum HOM05D004238 ORTHO05D004934 1.2e-110 404.1 356 58.7
FAN08G0774 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.6e-110 403.7 364 59.3
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 1.6e-110 403.7 354 58.2
PGSC0003DMG400005732 Solanum tuberosum HOM05D004238 ORTHO05D004934 3.5e-110 402.5 356 58.7
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 4.6e-110 402.1 357 58.5
Cc04_g06880 Coffea canephora HOM05D004238 ORTHO05D004934 7.8e-110 401.4 354 59.0
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 1.7e-109 400.2 357 58.5
Nitab4.5_0001986g0030 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.7e-109 400.2 356 57.9
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 1.7e-109 400.2 354 58.8
TAR371G0763 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.9e-109 399.1 355 60.3
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 5.0e-109 398.7 354 58.8
TAR535G0010 Trochodendron aralioides HOM05D004238 ORTHO05D004934 5.0e-109 398.7 355 60.0
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 8.6e-109 397.9 354 57.9
Thecc.03G040700 Theobroma cacao HOM05D004238 ORTHO05D004934 8.6e-109 397.9 353 58.9
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 1.5e-108 397.1 354 58.5
Lsat_1_v5_gn_8_143241 Lactuca sativa HOM05D004238 ORTHO05D004934 1.5e-108 397.1 363 60.1
PSO478G0260 Papaver somniferum HOM05D004238 ORTHO05D004934 1.5e-108 397.1 344 61.0
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 1.9e-108 396.7 357 58.5
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 3.3e-108 396.0 357 58.5
Nitab4.5_0004028g0040 Nicotiana tabacum HOM05D004238 ORTHO05D004934 4.3e-108 395.6 356 57.6
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 4.3e-108 395.6 359 58.2
MBI09_g25158_MAGBIO Magnolia biondii HOM05D004238 ORTHO05D004934 5.6e-108 395.2 354 58.5
CsaV3_1G004010 Cucumis sativus L. HOM05D004238 ORTHO05D004934 2.1e-107 393.3 354 57.6
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 2.8e-107 392.9 356 58.7
Potri.012G054200 Populus trichocarpa HOM05D004238 ORTHO05D004934 3.6e-107 392.5 355 58.6
MELO3C017324.2 Cucumis melo HOM05D004238 ORTHO05D004934 4.7e-107 392.1 357 57.1
FvH4_5g16670 Fragaria vesca HOM05D004238 ORTHO05D004934 4.7e-107 392.1 344 60.2
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 1.1e-106 391.0 376 55.6
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 1.4e-106 390.6 354 57.1
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 1.8e-106 390.2 356 58.1
Sed0011571 Sechium edule HOM05D004238 ORTHO05D004934 1.8e-106 390.2 356 57.0
Sc04g0003400 Simmondsia chinensis HOM05D004238 ORTHO05D004934 2.3e-106 389.8 356 57.0
ClCG06G014610 Citrullus lanatus HOM05D004238 ORTHO05D004934 3.1e-106 389.4 354 57.6
Sabra12G0038000 Salix brachista HOM05D004238 ORTHO05D004934 3.1e-106 389.4 353 57.8
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 4.0e-106 389.0 354 57.6
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 4.0e-106 389.0 372 56.7
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 5.2e-106 388.7 356 59.0
Prupe.5G224400 Prunus persica HOM05D004238 ORTHO05D004934 6.8e-106 388.3 354 58.5
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 8.9e-106 387.9 354 56.8
Gohir.D07G071400 Gossypium hirsutum HOM05D004238 ORTHO05D004934 1.2e-105 387.5 344 59.3
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 1.5e-105 387.1 359 57.7
COL.COLO4_20838 Corchorus olitorius HOM05D004238 ORTHO05D004934 1.5e-105 387.1 354 57.3
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 1.5e-105 387.1 357 57.1
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 3.4e-105 386.0 357 57.7
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 5.8e-105 385.2 357 57.1
MSTRG.11313 Avicennia marina HOM05D004238 ORTHO05D004934 3.7e-104 382.5 357 56.6
TAR426G0005 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.7e-104 382.5 346 59.0
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 1.4e-103 380.6 370 56.2
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 2.4e-103 379.8 379 55.1
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 2.4e-103 379.8 379 55.1
DCAR_024088 Daucus carota HOM05D004238 ORTHO05D004934 2.0e-102 376.7 327 62.1
HPP92_008849 Vanilla planifolia HOM05D004238 ORTHO05D004934 2.0e-102 376.7 357 56.3
FAN04G1535 Fragaria x ananassa HOM05D004238 ORTHO05D004934 2.7e-102 376.3 354 57.6
THA.LOC104820382 Tarenaya hassleriana HOM05D004238 ORTHO05D004934 1.3e-101 374.0 357 55.2
ATR0807G117 Amborella trichopoda HOM05D004238 ORTHO05D004934 1.7e-101 373.6 354 55.9
Os01g0138900 Oryza sativa ssp. japonica HOM05D004238 ORTHO05D004934 5.0e-101 372.1 355 55.2
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 8.6e-101 371.3 363 54.5
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 1.5e-100 370.5 355 54.1
A05p31380 Brassica napus HOM05D004238 ORTHO05D004934 4.3e-100 369.0 355 53.8
Thhalv10020846m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 4.3e-100 369.0 360 53.6
AT3G18270 Arabidopsis thaliana HOM05D004238 ORTHO05D004934 5.6e-100 368.6 355 53.2
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 9.5e-100 367.9 355 53.8
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 2.1e-99 366.7 355 53.5
Dinv34796 Davidia involucrata HOM05D004238 ORTHO05D004934 2.8e-99 366.3 355 54.1
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 3.6e-99 365.9 355 53.5
AL3G31500 Arabidopsis lyrata HOM05D004238 ORTHO05D004934 3.1e-98 362.8 357 52.9
Aa31LG8G5120 Aethionema arabicum HOM05D004238 ORTHO05D004934 4.4e-97 359.0 352 52.0
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 1.3e-96 357.5 349 54.2
Gorai.001G075300 Gossypium raimondii HOM05D004238 ORTHO05D004934 8.3e-96 354.8 325 58.2
Manes.02G071200 Manihot esculenta HOM05D004238 ORTHO05D004934 1.6e-94 350.5 354 50.8
DCAR_011367 Daucus carota HOM05D004238 ORTHO05D004934 3.0e-93 346.3 360 51.7
Atru.chr1.1618 Acer truncatum HOM05D004238 ORTHO05D004934 8.6e-93 344.7 354 51.1
Duzib138G0550 Durio zibethinus HOM05D004238 ORTHO05D004934 3.3e-92 342.8 354 50.8
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 8.1e-91 338.2 354 52.8
CDE08G0051 Ceratophyllum demersum HOM05D004238 ORTHO05D004934 2.4e-90 336.7 355 50.4
Gohir.D11G171700 Gossypium hirsutum HOM05D004238 ORTHO05D004934 6.8e-90 335.1 354 48.9
Ciclev10011789m.g Citrus clementina HOM05D004238 ORTHO05D004934 6.4e-88 328.6 354 49.2
CiPaw.15G135000 Carya illinoinensis HOM05D004238 ORTHO05D004934 1.9e-87 327.0 294 57.8
Thecc.04G129000 Theobroma cacao HOM05D004238 ORTHO05D004934 1.9e-87 327.0 354 48.9
Gohir.A11G165600 Gossypium hirsutum HOM05D004238 ORTHO05D004934 9.2e-87 324.7 354 48.0
SMO146G0383 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 1.3e-85 320.9 347 49.3
DCAR_000177 Daucus carota HOM05D004238 ORTHO05D004934 6.6e-85 318.5 212 73.1
COL.COLO4_09370 Corchorus olitorius HOM05D004238 ORTHO05D004934 3.3e-84 316.2 355 47.6
Mapoly0058s0107 Marchantia polymorpha HOM05D004238 ORTHO05D004934 4.3e-84 315.8 354 49.2
Cpa.g.sc170.33 Carica papaya HOM05D004238 ORTHO05D004934 5.6e-84 315.5 355 46.8
CsaV3_2G033830 Cucumis sativus L. HOM05D004238 ORTHO05D004934 9.0e-82 308.1 357 47.9
Pp3c2_34370 Physcomitrium patens HOM05D004238 ORTHO05D004934 2.0e-81 307.0 361 46.0
ClCG11G007750 Citrullus lanatus HOM05D004238 ORTHO05D004934 1.4e-79 300.8 364 45.3
CANSAT78G0772 Cannabis sativa HOM05D004238 ORTHO05D004934 5.4e-79 298.9 356 45.5
Zm00001eb124820 Zea mays HOM05D004238 ORTHO05D004934 6.6e-77 292.0 214 66.8
CARHR093620 Cardamine hirsuta HOM05D004238 ORTHO05D004934 1.1e-76 291.2 215 64.7
HPP92_008863 Vanilla planifolia HOM05D004238 ORTHO05D004934 2.5e-76 290.0 347 49.3
Zm00001eb335570 Zea mays HOM05D004238 ORTHO05D004934 2.5e-76 290.0 214 66.4
Sp3g16390 Schrenkiella parvula HOM05D004238 ORTHO05D004934 5.3e-74 282.3 349 45.8
SMO146G0146 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 1.9e-71 273.9 346 46.5
Eucgr.B00826 Eucalyptus grandis HOM05D004238 ORTHO05D004934 2.3e-69 266.9 356 44.1
Gohir.A07G066800 Gossypium hirsutum HOM05D004238 ORTHO05D004934 2.1e-67 260.4 261 54.4
Potri.015G044400 Populus trichocarpa HOM05D004238 ORTHO05D004934 2.2e-64 250.4 317 48.3
ECA233G1745 Erigeron canadensis HOM05D004238 ORTHO05D004934 5.1e-61 239.2 354 42.4
DCAR_011376 Daucus carota HOM05D004238 ORTHO05D004934 3.2e-55 219.9 190 63.7
Nn2g15201 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.1e-52 211.5 164 67.7
PRCOL_00000826 Prasinoderma coloniale HOM05D004238 ORTHO05D004934 3.8e-40 169.9 320 36.9
DCAR_000092 Daucus carota HOM05D004238 ORTHO05D004934 6.5e-40 169.1 111 74.8
Sabra15G0040700 Salix brachista HOM05D004238 ORTHO05D004934 2.2e-35 154.1 161 50.9
TPR.G26740 Trifolium pratense HOM05D004238 ORTHO05D004934 1.7e-32 144.4 96 69.8
Atru.chr12.656 Acer truncatum HOM05D004238 ORTHO05D004934 3.2e-31 140.2 116 57.8
Sed0014968 Sechium edule HOM05D004238 ORTHO05D004934 7.2e-31 139.0 106 65.1
Atru.chr12.683 Acer truncatum HOM05D004238 ORTHO05D004934 2.7e-30 137.1 112 57.1
Duzib205G0622 Durio zibethinus HOM05D004238 ORTHO05D004934 8.8e-29 132.1 185 44.3
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 3.6e-22 110.2 164 42.1
Lalb_Chr00c06g0404671 Lupinus albus HOM05D004238 ORTHO05D004934 1.3e-19 101.7 120 46.7
TAR371G0419 Trochodendron aralioides HOM05D004238 ORTHO05D004934 6.3e-19 99.4 101 54.5
arahy.Tifrunner.gnm1.ann1.78LW43 Arachis hypogaea HOM05D004238 ORTHO05D004934 2.4e-18 97.4 112 44.6
arahy.Tifrunner.gnm1.ann1.8NU3PL Arachis hypogaea HOM05D004238 ORTHO05D004934 2.0e-17 94.4 112 43.8
Zm00001eb084840 Zea mays HOM05D004238 ORTHO05D004934 8.5e-16 89.0 73 61.6
Nn4g22335 Nelumbo nucifera HOM05D004238 ORTHO05D004934 3.2e-15 87.0 63 68.3
Pp3s30_70 Physcomitrium patens HOM05D004238 ORTHO05D004934 3.2e-15 87.0 337 24.9
arahy.Tifrunner.gnm1.ann1.K93WBA Arachis hypogaea HOM05D004238 ORTHO05D004934 7.2e-15 85.9 90 48.9
Pp3s30_460 Physcomitrium patens HOM05D019034 ORTHO05D004934 3.6e-14 83.6 199 31.2
AagrBONN_evm.TU.Sc2ySwM_117.3507 Anthoceros agrestis HOM05D004238 ORTHO05D004934 2.3e-13 80.9 105 42.9
Solyc08g045760.1 Solanum lycopersicum HOM05D004238 ORTHO05D004934 3.0e-13 80.5 66 57.6
Psat5g132800 Pisum sativum HOM05D004238 ORTHO05D004934 2.0e-12 77.8 73 53.4
MELO3C008155.2 Cucumis melo HOM05D004238 ORTHO05D004934 5.7e-12 76.3 99 43.4
arahy.Tifrunner.gnm1.ann1.QA2PAR Arachis hypogaea HOM05D004238 ORTHO05D004934 3.7e-11 73.6 71 53.5
SEGI_36538 Sequoiadendron giganteum HOM05D004238 ORTHO05D004934 4.8e-11 73.2 109 40.4
Dinv00811 Davidia involucrata HOM05D004238 ORTHO05D004934 2.0e-09 67.8 64 48.4
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 5.0e-08 63.2 53 54.7
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 5.0e-08 63.2 67 50.7


User provided reference genes

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