Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011315 Daucus carota HOM05D002631 ORTHO05D002861 6.9e-96 354.0 180 100.0
DCAR_015090 Daucus carota HOM05D002631 ORTHO05D002861 1.3e-17 94.0 119 50.4
Hma1.2p1_0279F.1_g112600 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 8.3e-17 91.3 236 34.3
Manes.17G104100 Manihot esculenta HOM05D002631 ORTHO05D002861 4.1e-16 89.0 203 39.4
TAR371G1118 Trochodendron aralioides HOM05D002631 ORTHO05D002861 1.7e-14 83.6 222 32.9
Manes.15G159300 Manihot esculenta HOM05D002631 ORTHO05D002861 3.0e-14 82.8 215 36.3
MD17G1013900 Malus domestica HOM05D002631 ORTHO05D002861 6.6e-14 81.6 217 34.1
Prupe.3G303900 Prunus persica HOM05D002631 ORTHO05D002861 1.5e-13 80.5 215 34.0
Nn3g16504 Nelumbo nucifera HOM05D002631 ORTHO05D002861 1.9e-13 80.1 228 33.3
DCAR_021775 Daucus carota HOM05D002631 ORTHO05D002861 3.3e-13 79.3 191 39.3
Duzib147G0551 Durio zibethinus HOM05D002631 ORTHO05D002861 4.3e-13 79.0 225 36.0
Nn4g22361 Nelumbo nucifera HOM05D002631 ORTHO05D002861 4.3e-13 79.0 231 32.9
ClCG05G013370 Citrullus lanatus HOM05D002631 ORTHO05D002861 5.6e-13 78.6 202 34.2
CSS0020364 Camellia sinensis var. sinensis HOM05D002631 ORTHO05D002861 1.2e-12 77.4 231 32.0
Dinv33351 Davidia involucrata HOM05D000172 ORTHO05D000781 2.8e-12 76.3 216 34.3
Migut.K01455 Erythranthe guttata HOM05D002631 ORTHO05D002861 4.0e-11 72.4 205 33.7
MD09G1013200 Malus domestica HOM05D002631 ORTHO05D002861 5.2e-11 72.0 216 33.3
CiPaw.03G053800 Carya illinoinensis HOM05D002631 ORTHO05D002861 8.9e-11 71.2 228 33.8
Ciclev10016522m.g Citrus clementina HOM05D002631 ORTHO05D002861 8.9e-11 71.2 214 34.1
Duzib264G0548 Durio zibethinus HOM05D002631 ORTHO05D002861 8.9e-11 71.2 223 34.5
Lj7A608T54 Lonicera japonica HOM05D002631 ORTHO05D002861 8.9e-11 71.2 141 36.9
Oeu011958.2 Olea europaea HOM05D002631 ORTHO05D002861 8.9e-11 71.2 230 33.9
Hma1.2p1_2105F.1_g314170 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.2e-10 70.9 227 30.8
Sed0001821 Sechium edule HOM05D002631 ORTHO05D002861 2.0e-10 70.1 206 32.5
CiPaw.04G035400 Carya illinoinensis HOM05D002631 ORTHO05D002861 3.4e-10 69.3 134 43.3
Gohir.D07G234300 Gossypium hirsutum HOM05D002631 ORTHO05D002861 3.4e-10 69.3 208 34.1
Gohir.A07G227200 Gossypium hirsutum HOM05D002631 ORTHO05D002861 4.4e-10 68.9 208 34.6
MSTRG.3083 Avicennia marina HOM05D002631 ORTHO05D002861 5.8e-10 68.6 227 33.0
MELO3C014870.2 Cucumis melo HOM05D002631 ORTHO05D002861 5.8e-10 68.6 202 32.7
Migut.F00077 Erythranthe guttata HOM05D002631 ORTHO05D002861 9.8e-10 67.8 206 34.5
Rhsim10G0007400 Rhododendron simsii HOM05D002631 ORTHO05D002861 1.3e-09 67.4 230 33.0
Thecc.04G033600 Theobroma cacao HOM05D002631 ORTHO05D002861 1.3e-09 67.4 222 34.7
Cfa007243 Carpinus fangiana HOM05D002631 ORTHO05D002861 2.2e-09 66.6 137 40.1
TWI56G0933 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 2.2e-09 66.6 199 33.2
MBI07_g31942_MAGBIO Magnolia biondii HOM05D002631 ORTHO05D002861 3.7e-09 65.9 234 27.8
Nitab4.5_0000559g0430 Nicotiana tabacum HOM05D002631 ORTHO05D002861 4.9e-09 65.5 218 30.3
Potri.001G332500 Populus trichocarpa HOM05D002631 ORTHO05D002861 4.9e-09 65.5 137 40.1
FAN05G0255 Fragaria x ananassa HOM05D002631 ORTHO05D002861 8.3e-09 64.7 219 31.5
Actinidia30886 Actinidia chinensis HOM05D002631 ORTHO05D002861 1.4e-08 63.9 228 30.7
FAN09G0528 Fragaria x ananassa HOM05D002631 ORTHO05D002861 1.4e-08 63.9 219 31.1
Hma1.2p1_1278F.1_g272420 Hydrangea macrophylla HOM05D002631 ORTHO05D002861 1.4e-08 63.9 133 34.6
Haze_14856 Corylus avellana HOM05D002631 ORTHO05D002861 1.9e-08 63.5 250 29.6
Sabra16G0213400 Salix brachista HOM05D002631 ORTHO05D002861 1.9e-08 63.5 137 41.6
Oeu035217.1 Olea europaea HOM05D002631 ORTHO05D002861 2.4e-08 63.2 219 30.1
Gohir.D09G035700 Gossypium hirsutum HOM05D002631 ORTHO05D002861 3.2e-08 62.8 209 34.0
Gorai.006G040600 Gossypium raimondii HOM05D002631 ORTHO05D002861 3.2e-08 62.8 209 34.0
Actinidia04441 Actinidia chinensis HOM05D002631 ORTHO05D002861 4.1e-08 62.4 204 31.9
Duzib187G0830 Durio zibethinus HOM05D002631 ORTHO05D002861 4.1e-08 62.4 206 32.0
Gohir.A09G034900 Gossypium hirsutum HOM05D002631 ORTHO05D002861 5.4e-08 62.0 205 32.7
Peaxi162Scf00700g00133 Petunia axillaris HOM05D002631 ORTHO05D002861 5.4e-08 62.0 211 31.8
Aqoxy3G01502 Aquilegia oxysepala HOM05D002631 ORTHO05D002861 1.2e-07 60.8 144 33.3
FAN02G3740 Fragaria x ananassa HOM05D002631 ORTHO05D002861 1.2e-07 60.8 218 30.3
FAN14G5847 Fragaria x ananassa HOM05D002631 ORTHO05D002861 1.6e-07 60.5 219 31.5
Actinidia05911 Actinidia chinensis HOM05D002631 ORTHO05D002861 2.0e-07 60.1 224 32.6
Cpa.g.c32694.2 Carica papaya HOM05D002631 ORTHO05D002861 2.0e-07 60.1 149 31.5
CsaV3_3G027170 Cucumis sativus L. HOM05D002631 ORTHO05D002861 2.7e-07 59.7 119 40.3
Gorai.001G269900 Gossypium raimondii HOM05D002631 ORTHO05D002861 2.7e-07 59.7 224 32.6
RcHm_v2.0_Chr2g0175231 Rosa chinensis HOM05D002631 ORTHO05D002861 2.7e-07 59.7 219 31.5
TWI12G0788 Tripterygium wilfordii HOM05D002631 ORTHO05D002861 2.7e-07 59.7 202 31.2
GSVIVG01010390001 Vitis vinifera HOM05D002631 ORTHO05D002861 6.0e-07 58.5 222 30.2
Atru.chr6.2535 Acer truncatum HOM05D002631 ORTHO05D002861 1.0e-06 57.8 237 32.1
Nitab4.5_0005161g0010 Nicotiana tabacum HOM05D002631 ORTHO05D002861 1.0e-06 57.8 218 29.4
SalBow4G0924 Salvia bowleyana HOM05D002631 ORTHO05D002861 1.3e-06 57.4 211 30.3
Lj2g0026031 Lotus japonicus HOM05D002631 ORTHO05D002861 1.7e-06 57.0 197 29.4
HPP92_023191 Vanilla planifolia HOM05D002631 ORTHO05D002861 2.3e-06 56.6 147 29.3
MSTRG.15564 Avicennia marina HOM05D002631 ORTHO05D002861 3.0e-06 56.2 220 27.3
SalBow4G2864 Salvia bowleyana HOM05D002631 ORTHO05D002861 3.0e-06 56.2 211 29.9
FvH4_6g53190 Fragaria vesca HOM05D002631 ORTHO05D002861 5.0e-06 55.5 127 37.0


User provided reference genes

Program Settings