Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 6.4e-67 257.3 132 100.0
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 3.1e-53 211.8 134 80.6
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 3.8e-51 204.9 132 76.5
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 6.4e-51 204.1 133 75.9
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.2e-49 199.9 133 77.4
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 2.1e-49 199.1 131 74.0
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 2.7e-49 198.7 134 77.6
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 4.6e-49 198.0 134 74.6
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 1.0e-48 196.8 133 78.2
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 3.0e-48 195.3 132 73.5
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 3.0e-48 195.3 133 75.2
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 6.7e-48 194.1 132 76.5
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 8.7e-48 193.7 134 75.4
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 8.7e-48 193.7 132 74.2
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 1.1e-47 193.4 129 76.0
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 2.5e-47 192.2 134 73.9
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 2.5e-47 192.2 133 74.4
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 2.5e-47 192.2 132 74.2
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 3.3e-47 191.8 132 75.8
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 3.3e-47 191.8 132 73.5
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 5.6e-47 191.0 134 73.9
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 7.4e-47 190.7 134 76.1
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 7.4e-47 190.7 132 72.7
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 9.6e-47 190.3 134 70.9
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 1.3e-46 189.9 132 71.2
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 1.3e-46 189.9 132 73.5
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 1.6e-46 189.5 132 72.7
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 2.1e-46 189.1 133 75.2
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.1e-46 189.1 133 72.9
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 2.1e-46 189.1 134 74.6
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 2.8e-46 188.7 133 73.7
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 2.8e-46 188.7 132 72.0
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 4.8e-46 188.0 133 71.4
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 4.8e-46 188.0 134 72.4
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 6.2e-46 187.6 133 73.7
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 6.2e-46 187.6 134 73.1
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 6.2e-46 187.6 134 73.9
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 6.2e-46 187.6 134 72.4
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 8.2e-46 187.2 132 72.0
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.1e-45 186.8 132 72.0
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.1e-45 186.8 134 73.1
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.4e-45 186.4 132 73.5
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.4e-45 186.4 133 72.2
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 1.4e-45 186.4 132 72.7
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 1.8e-45 186.0 132 72.0
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 1.8e-45 186.0 134 74.6
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 1.8e-45 186.0 134 71.6
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 2.4e-45 185.7 132 71.2
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 2.4e-45 185.7 134 74.6
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 3.1e-45 185.3 137 70.1
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 3.1e-45 185.3 133 72.9
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 3.1e-45 185.3 132 70.5
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 3.1e-45 185.3 132 70.5
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.0e-45 184.9 132 72.7
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 4.0e-45 184.9 132 72.7
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 5.3e-45 184.5 132 71.2
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 6.9e-45 184.1 132 71.2
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 6.9e-45 184.1 134 73.9
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 1.5e-44 183.0 132 72.7
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 2.0e-44 182.6 134 72.4
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 2.6e-44 182.2 134 68.7
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 7.6e-44 180.6 132 72.0
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 7.6e-44 180.6 132 73.5
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.0e-43 180.3 134 72.4
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 1.0e-43 180.3 134 70.1
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 1.3e-43 179.9 133 70.7
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 2.2e-43 179.1 124 73.4
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.2e-43 179.1 134 71.6
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 3.8e-43 178.3 127 70.9
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 3.8e-43 178.3 133 69.2
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 6.5e-43 177.6 133 67.7
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 6.5e-43 177.6 117 80.3
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 1.1e-42 176.8 132 67.4
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 72.1
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 72.1
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.4e-42 176.4 123 70.7
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 3.2e-42 175.3 125 72.8
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 4.2e-42 174.9 136 70.6
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.2e-42 174.9 136 70.6
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.2e-42 174.9 136 70.6
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 5.5e-42 174.5 135 67.4
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.5e-42 174.5 136 70.6
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.5e-42 174.5 136 70.6
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.5e-42 174.5 136 70.6
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 5.5e-42 174.5 105 82.9
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 7.1e-42 174.1 105 81.9
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.1e-42 174.1 135 70.4
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-41 173.3 136 69.9
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.6e-41 172.9 135 70.4
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 4.6e-41 171.4 132 66.7
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 6.0e-41 171.0 132 68.9
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 6.0e-41 171.0 134 68.7
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 7.9e-41 170.6 120 72.5
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 1.0e-40 170.2 123 70.7
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 5.1e-40 167.9 102 78.4
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 6.7e-40 167.5 123 69.9
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 1.5e-39 166.4 105 78.1
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 7.4e-39 164.1 133 63.9
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 2.2e-38 162.5 132 63.6
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.8e-38 162.2 132 66.7
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 2.8e-38 162.2 132 63.6
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 6.3e-38 161.0 105 78.1
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 6.3e-38 161.0 105 78.1
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 6.3e-38 161.0 105 78.1
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 6.3e-38 161.0 105 78.1
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 6.3e-38 161.0 134 64.2
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 8.2e-38 160.6 118 70.3
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.8e-37 159.5 110 73.6
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.8e-37 159.5 118 70.3
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.8e-37 159.5 110 73.6
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 4.1e-37 158.3 133 66.2
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 9.0e-37 157.1 122 66.4
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 2.6e-36 155.6 92 81.5
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 7.6e-36 154.1 110 70.9
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 1.0e-35 153.7 132 62.9
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 3.8e-35 151.8 92 79.3
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 3.2e-34 148.7 124 64.5
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 3.2e-34 148.7 92 77.2
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 5.5e-34 147.9 100 74.0
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.6e-33 146.4 112 67.9
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 7.9e-33 144.1 133 60.2
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 5.1e-32 141.4 120 65.0
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 5.1e-32 141.4 105 65.7
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 2.5e-31 139.0 91 75.8
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.3e-31 138.3 123 60.2
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 3.8e-27 125.2 108 60.2
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.5e-23 113.2 93 65.6
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.2e-22 109.4 57 89.5
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 4.8e-22 108.2 92 58.7
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 2.4e-21 105.9 124 49.2
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 5.9e-20 101.3 110 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 2.9e-19 99.0 124 47.6
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 2.5e-18 95.9 105 50.5
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 9.7e-15 84.0 52 73.1
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 6.3e-14 81.3 69 66.7
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 8.2e-14 80.9 88 54.5
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 4.5e-12 75.1 80 56.2
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 5.0e-11 71.6 99 41.4
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.5e-10 70.1 129 38.8
Dinv25304 Davidia involucrata HOM05D000009 ORTHO05D000008 5.2e-08 61.6 54 64.8
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 4.4e-07 58.5 73 41.1


User provided reference genes

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