Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 2.2e-64 248.8 130 100.0
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.6e-22 109.8 136 54.4
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 2.0e-20 102.8 133 52.6
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 8.4e-19 97.4 139 49.6
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 1.1e-18 97.1 144 53.5
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 1.9e-18 96.3 133 49.6
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 4.2e-18 95.1 132 51.5
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 5.4e-18 94.7 147 49.0
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 5.4e-18 94.7 137 51.1
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 1.2e-17 93.6 132 49.2
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 1.2e-17 93.6 132 51.5
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 1.0e-16 90.5 140 52.9
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 1.7e-16 89.7 144 50.7
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 2.3e-16 89.4 140 52.1
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 3.9e-16 88.6 133 46.6
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 6.6e-16 87.8 124 50.8
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 6.6e-16 87.8 138 49.3
Migut.K01418 Erythranthe guttata HOM05D007617 ORTHO05D007195 4.3e-15 85.1 137 46.7
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 5.6e-15 84.7 129 47.3
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 9.6e-15 84.0 137 46.0
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 9.6e-15 84.0 141 46.1
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 9.6e-15 84.0 136 49.3
Oeu050454.1 Olea europaea HOM05D007617 ORTHO05D007195 1.3e-14 83.6 143 46.2
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 6.2e-14 81.3 140 45.0
MSTRG.15542 Avicennia marina HOM05D007617 ORTHO05D007195 8.1e-14 80.9 133 43.6
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 8.1e-14 80.9 146 41.1
Oeu054643.1 Olea europaea HOM05D007617 ORTHO05D007195 1.4e-13 80.1 139 43.2
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.8e-13 79.7 135 46.7
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.8e-13 79.7 135 46.7
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 2.4e-13 79.3 137 44.5
Lj7P603T33 Lonicera japonica HOM05D007617 ORTHO05D007195 4.0e-13 78.6 126 42.9
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 4.0e-13 78.6 128 46.1
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 5.3e-13 78.2 140 43.6
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 5.3e-13 78.2 131 45.0
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 6.9e-13 77.8 135 48.1
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 9.0e-13 77.4 141 41.1
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.5e-12 76.6 135 47.4
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.5e-12 76.6 135 48.1
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 2.0e-12 76.3 156 42.9
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.0e-12 76.3 135 47.4
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 3.4e-12 75.5 135 48.1
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 4.4e-12 75.1 133 42.1
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 5.8e-12 74.7 130 44.6
Sc04g0009720 Simmondsia chinensis HOM05D007617 ORTHO05D007195 5.8e-12 74.7 119 50.4
Hund06047 Selenicereus undatus HOM05D007617 ORTHO05D007195 7.6e-12 74.3 128 41.4
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 9.9e-12 73.9 131 42.0
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 1.7e-11 73.2 131 42.0
Lsat_1_v5_gn_3_30061 Lactuca sativa HOM05D007617 ORTHO05D007195 2.2e-11 72.8 133 44.4
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 2.2e-11 72.8 134 46.3
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 2.9e-11 72.4 132 44.7
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 4.9e-11 71.6 109 46.8
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 4.9e-11 71.6 135 46.7
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 4.9e-11 71.6 160 41.9
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 4.9e-11 71.6 136 44.1
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 6.4e-11 71.2 135 47.4
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 8.4e-11 70.9 143 44.1
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 1.4e-10 70.1 132 43.9
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.4e-10 70.1 139 40.3
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 2.4e-10 69.3 132 44.7
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 4.2e-10 68.6 126 42.9
Gohir.A07G055100 Gossypium hirsutum HOM05D011792 ORTHO05D007195 5.4e-10 68.2 144 43.1
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 5.4e-10 68.2 142 40.8
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 7.1e-10 67.8 145 45.5
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 7.1e-10 67.8 135 43.0
Gohir.D12G189700 Gossypium hirsutum HOM05D011792 ORTHO05D007195 1.2e-09 67.0 143 39.9
Haze_14778 Corylus avellana HOM05D007617 ORTHO05D007195 1.6e-09 66.6 127 40.9
Ca_11155_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 2.1e-09 66.2 133 41.4
Ca_11158_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 2.1e-09 66.2 133 41.4
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 2.7e-09 65.9 137 39.4
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 2.7e-09 65.9 134 41.8
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 3.5e-09 65.5 124 45.2
Gorai.001G062900 Gossypium raimondii HOM05D011792 ORTHO05D007195 3.5e-09 65.5 144 43.1
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 4.6e-09 65.1 130 40.8
AL5G27740 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 6.0e-09 64.7 136 41.2
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 6.0e-09 64.7 135 38.5
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 6.0e-09 64.7 138 38.4
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 6.0e-09 64.7 137 45.3
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 6.0e-09 64.7 137 40.1
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 7.8e-09 64.3 142 43.7
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 1.0e-08 63.9 132 43.2
Ah.03g133500 Amaranthus hybridus HOM05D007617 ORTHO05D007195 1.7e-08 63.2 115 43.5
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 2.3e-08 62.8 139 38.1
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 3.0e-08 62.4 132 41.7
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 3.9e-08 62.0 141 38.3
BraA06t25018Z Brassica rapa HOM05D010525 ORTHO05D007195 5.1e-08 61.6 132 40.2
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 5.1e-08 61.6 138 37.7
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 6.6e-08 61.2 133 36.8
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 6.6e-08 61.2 147 38.8
TAR622G0315 Trochodendron aralioides HOM05D007617 ORTHO05D007195 8.7e-08 60.8 141 38.3
Nn3g16639 Nelumbo nucifera HOM05D007617 ORTHO05D007195 1.1e-07 60.5 139 38.1
Potri.001G340100 Populus trichocarpa HOM05D007617 ORTHO05D007195 1.1e-07 60.5 148 36.5
THA.LOC109117150 Tarenaya hassleriana HOM05D007617 ORTHO05D007195 1.1e-07 60.5 137 40.9
TWI39G0914 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 1.9e-07 59.7 135 41.5
Haze_07632 Corylus avellana HOM05D007617 ORTHO05D007195 3.3e-07 58.9 148 36.5
Gohir.A12G186700 Gossypium hirsutum HOM05D011792 ORTHO05D007195 4.3e-07 58.5 144 37.5
AL8G40240 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 5.6e-07 58.2 130 36.9
A06p19360 Brassica napus HOM05D010525 ORTHO05D007195 5.6e-07 58.2 134 39.6
TWI23G0333 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 9.6e-07 57.4 133 42.1
BcaC07g39315 Brassica carinata HOM05D010525 ORTHO05D007195 1.3e-06 57.0 132 37.9
C08p23300 Brassica napus HOM05D010525 ORTHO05D007195 1.3e-06 57.0 132 37.9
BolC8t49961H Brassica oleracea HOM05D010525 ORTHO05D007195 1.3e-06 57.0 132 37.9
Actinidia36140 Actinidia chinensis HOM05D007617 ORTHO05D007195 2.1e-06 56.2 140 40.0
Prupe.5G161500 Prunus persica HOM05D007617 ORTHO05D007195 2.1e-06 56.2 140 35.7
unitig_32.g10674 Utricularia gibba HOM05D007617 ORTHO05D007195 2.1e-06 56.2 68 55.9
Ah.02g130330 Amaranthus hybridus HOM05D007617 ORTHO05D007195 3.6e-06 55.5 115 40.9
MELO3C014838.2 Cucumis melo HOM05D007617 ORTHO05D007195 3.6e-06 55.5 151 35.8
CsaV3_3G027400 Cucumis sativus L. HOM05D007617 ORTHO05D007195 6.2e-06 54.7 152 36.2


User provided reference genes

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