Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 0.0e+00 1414.8 770 100.0
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 0.0e+00 1124.0 769 79.3
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.8e-238 829.7 790 57.8
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 7.2e-235 817.8 778 57.6
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 3.2e-227 792.3 784 55.6
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.2e-226 790.4 783 56.2
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 2.8e-223 779.2 776 54.6
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 4.7e-218 761.9 786 54.3
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 9.7e-216 754.2 786 53.3
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 6.3e-215 751.5 778 54.0
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.1e-214 750.7 768 55.1
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 1.8e-214 750.0 778 52.8
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 5.3e-214 748.4 784 52.8
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 1.6e-213 746.9 778 53.2
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 1.6e-213 746.9 779 53.7
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 2.0e-213 746.5 778 53.7
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 3.5e-213 745.7 698 57.9
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 6.5e-212 741.5 667 60.0
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 6.5e-212 741.5 779 52.1
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.5e-211 740.3 777 52.5
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 2.7e-210 736.1 769 54.4
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 6.1e-210 734.9 788 51.9
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 1.4e-209 733.8 793 53.0
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.8e-209 733.4 777 52.6
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 2.3e-209 733.0 786 51.9
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 4.0e-209 732.3 783 51.9
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 4.0e-209 732.3 787 53.5
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 2.0e-208 729.9 786 52.2
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.4e-208 729.2 782 53.2
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 6.3e-207 724.9 782 52.3
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 1.4e-206 723.8 770 54.3
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 3.1e-206 722.6 790 52.5
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 4.1e-206 722.2 758 53.7
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 7.0e-206 721.5 787 50.7
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 1.6e-205 720.3 781 52.9
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 3.5e-205 719.2 776 52.7
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.3e-204 717.2 785 51.2
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.9e-204 716.1 785 50.8
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 6.6e-204 714.9 785 50.6
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 1.5e-203 713.8 786 52.0
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.5e-203 713.8 764 53.3
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 1.9e-203 713.4 811 50.3
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 5.5e-203 711.8 783 51.2
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 2.1e-202 709.9 776 51.2
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 2.8e-202 709.5 787 50.3
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 1.8e-201 706.8 793 49.2
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 4.0e-201 705.7 765 52.0
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.0e-200 703.4 807 50.3
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 2.8e-199 699.5 787 49.8
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 1.8e-198 696.8 786 50.9
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 2.4e-198 696.4 782 49.6
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 3.2e-198 696.0 642 58.9
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 4.1e-198 695.7 783 50.2
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 4.1e-198 695.7 699 54.9
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 5.4e-198 695.3 810 49.5
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 2.7e-197 693.0 782 50.9
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.3e-196 690.6 784 49.1
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 1.7e-196 690.3 781 49.7
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 5.0e-196 688.7 744 52.7
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 6.6e-196 688.3 810 48.9
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 6.6e-196 688.3 770 49.6
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.2e-194 684.1 780 50.9
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.1e-194 683.3 819 48.4
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 3.6e-194 682.6 783 49.0
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 4.7e-194 682.2 782 49.1
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.0e-193 681.0 795 47.8
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 1.0e-193 681.0 775 49.4
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 1.4e-193 680.6 770 49.1
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 1.8e-193 680.2 759 50.7
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 4.4e-192 675.6 743 51.4
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 5.8e-192 675.2 767 51.6
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 5.8e-192 675.2 782 48.0
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 5.8e-192 675.2 763 50.3
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 6.4e-191 671.8 768 48.6
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 2.4e-190 669.8 759 51.0
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 1.6e-189 667.2 783 48.3
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 1.9e-187 660.2 771 49.5
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 6.2e-186 655.2 728 50.4
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 3.1e-185 652.9 769 49.4
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 5.4e-182 642.1 770 49.2
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 5.4e-182 642.1 772 48.7
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.2e-181 641.0 750 48.0
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 2.1e-181 640.2 773 49.0
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 2.7e-181 639.8 773 48.6
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 7.8e-181 638.3 767 48.9
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 1.3e-180 637.5 773 48.6
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 1.7e-180 637.1 767 48.8
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 3.0e-180 636.3 641 55.1
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 6.6e-180 635.2 773 48.6
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 1.1e-179 634.4 773 48.5
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 1.6e-178 630.6 810 47.3
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 3.6e-178 629.4 770 48.7
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 6.8e-177 625.2 773 48.0
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 7.6e-176 621.7 697 49.1
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 6.4e-175 618.6 785 46.0
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.7e-173 613.2 654 54.0
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 8.9e-169 598.2 658 51.4
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 1.0e-164 584.7 769 44.0
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.7e-156 557.4 770 46.2
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.3e-155 552.7 705 47.2
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 1.3e-154 551.2 777 42.0
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 5.3e-153 545.8 779 43.9
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 4.5e-144 516.2 768 41.1
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 4.2e-142 509.6 592 49.7
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 5.5e-142 509.2 656 45.6
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 8.4e-135 485.3 575 51.8
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 5.3e-129 466.1 712 42.6
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 7.7e-128 462.2 494 54.7
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 1.4e-118 431.4 505 49.5
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 3.7e-114 416.8 767 40.2
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 3.8e-103 380.2 492 46.1
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 5.7e-91 339.7 835 31.5
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 5.6e-86 323.2 774 30.6
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 2.8e-85 320.9 794 30.2
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 2.4e-65 254.6 552 32.4
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 8.6e-63 246.1 292 49.3
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.3e-55 222.2 369 39.6
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 3.0e-55 221.1 295 43.4
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.3e-54 217.6 311 48.6
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 6.4e-50 203.4 253 42.7
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 3.2e-49 201.1 265 44.9
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 4.2e-41 174.1 240 44.6
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 2.1e-40 171.8 160 55.6
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 4.9e-34 150.6 122 61.5
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 8.1e-29 133.3 452 27.9
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 2.1e-21 108.6 349 27.2
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.2e-19 102.8 152 40.1
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 1.4e-17 95.9 311 28.9
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 3.0e-15 88.2 97 53.6
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 8.7e-15 86.7 65 72.3
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 4.1e-12 77.8 65 63.1
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 7.7e-11 73.6 101 40.6
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 4.4e-06 57.8 57 56.1


User provided reference genes

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