Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 0.0e+00 1332.4 711 100.0
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 9.3e-237 823.9 698 61.3
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 2.1e-220 769.6 691 60.2
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 6.9e-216 754.6 585 66.2
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 4.5e-215 751.9 722 56.1
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 7.6e-215 751.1 705 57.6
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 1.4e-213 746.9 589 63.5
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.3e-211 740.3 716 56.0
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 5.7e-210 734.9 728 55.5
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 3.1e-208 729.2 623 60.4
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 4.1e-208 728.8 719 55.8
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 4.6e-204 715.3 686 55.7
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 6.1e-204 714.9 600 62.7
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 1.0e-203 714.1 727 54.7
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 1.1e-202 710.7 595 59.8
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.6e-201 706.8 619 58.8
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 1.6e-201 706.8 709 54.3
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 8.5e-198 694.5 585 59.5
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 2.5e-197 693.0 631 58.0
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 1.6e-196 690.3 582 60.3
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 1.6e-196 690.3 582 60.7
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 5.1e-195 685.3 584 59.9
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 4.1e-192 675.6 632 57.6
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 5.3e-192 675.2 581 58.7
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 1.3e-190 670.6 606 58.7
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 3.8e-190 669.1 583 59.2
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 4.2e-189 665.6 651 54.7
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 3.6e-188 662.5 606 56.9
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 4.7e-188 662.1 615 57.4
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 2.0e-186 656.8 484 67.8
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 2.6e-186 656.4 691 52.5
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.3e-185 654.1 543 63.0
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 3.1e-184 649.4 628 55.3
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 2.2e-182 643.3 570 57.2
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 6.5e-182 641.7 527 61.3
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 6.1e-180 635.2 614 54.1
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 4.0e-179 632.5 699 51.5
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 8.8e-179 631.3 587 53.7
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 4.4e-178 629.0 655 52.7
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 2.8e-177 626.3 558 56.1
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 4.8e-177 625.5 598 55.0
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.3e-176 622.1 629 54.4
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 6.5e-174 615.1 484 64.5
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 1.1e-173 614.4 617 52.8
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.5e-173 614.0 573 54.3
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 1.2e-172 610.9 585 53.5
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 2.7e-172 609.8 518 61.2
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 7.5e-170 601.7 655 51.0
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 2.2e-169 600.1 577 54.8
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 1.9e-165 587.0 598 53.0
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 5.2e-163 578.9 634 48.3
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 6.8e-163 578.6 447 61.7
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 3.4e-162 576.2 489 61.1
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 2.8e-161 573.2 567 56.3
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 2.3e-158 563.5 558 52.0
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 1.9e-157 560.5 425 66.4
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 2.5e-157 560.1 450 61.3
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 2.5e-157 560.1 500 56.8
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 4.4e-154 549.3 630 47.8
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.1e-152 544.7 409 66.0
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 2.3e-150 537.0 598 49.5
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 8.6e-150 535.0 509 55.2
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 1.9e-149 533.9 417 63.3
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 2.5e-149 533.5 421 62.7
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 4.3e-149 532.7 671 46.8
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 9.5e-149 531.6 428 62.1
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 1.2e-146 524.6 560 49.1
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 3.4e-146 523.1 560 49.1
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 5.8e-146 522.3 486 53.9
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 4.9e-145 519.2 577 48.2
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 6.4e-145 518.8 512 53.5
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 2.4e-144 516.9 608 47.9
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 4.1e-144 516.2 576 47.7
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 4.1e-144 516.2 584 47.9
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 9.2e-144 515.0 548 48.7
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 1.2e-143 514.6 550 48.4
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 2.0e-143 513.8 572 48.4
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 2.0e-143 513.8 572 48.4
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 3.5e-143 513.1 486 53.5
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 1.5e-141 507.7 568 48.2
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 7.3e-141 505.4 415 61.7
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 9.5e-141 505.0 543 49.2
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 7.5e-138 495.4 407 61.9
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 7.3e-133 478.8 576 47.0
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.4e-131 474.6 497 50.7
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 1.4e-128 464.5 539 46.6
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 4.6e-127 459.5 498 50.2
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 4.0e-123 446.4 533 46.3
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 1.0e-118 431.8 560 43.9
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 1.3e-116 424.9 386 59.1
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 1.7e-110 404.4 364 59.3
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 5.3e-107 392.9 529 45.4
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 1.2e-106 391.7 545 45.1
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 1.5e-106 391.3 345 58.6
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 5.8e-106 389.4 331 57.1
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 3.9e-102 376.7 555 41.3
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.5e-101 374.8 321 58.6
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 6.7e-94 349.4 320 55.9
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 4.3e-93 346.7 288 57.3
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 9.4e-80 302.4 317 53.0
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 7.9e-79 299.3 278 55.4
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 2.4e-67 261.2 280 55.4
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.1e-56 225.7 213 60.1
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 4.0e-46 190.7 169 62.7
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 4.4e-45 187.2 288 51.4
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 4.9e-44 183.7 160 64.4
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 2.4e-43 181.4 207 53.1
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.6e-42 178.7 141 70.2
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 7.5e-29 133.3 253 28.9
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 6.0e-26 123.6 264 31.4
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 8.3e-20 103.2 81 65.4
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 6.0e-18 97.1 131 48.1
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-14 85.9 59 64.4
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 4.4e-13 80.9 68 60.3
Lalb_Chr10g0092301 Lupinus albus HOM05D002617 ORTHO05D009035 2.7e-10 71.6 72 52.8
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 4.7e-07 60.8 42 66.7


User provided reference genes

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