Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 1.0e-73 280.0 145 100.0
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 8.1e-31 137.5 120 63.3
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 2.4e-30 136.0 116 64.7
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 3.1e-30 135.6 126 61.9
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 5.3e-30 134.8 113 64.6
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 5.3e-30 134.8 117 62.4
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 9.0e-30 134.0 114 64.0
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 1.5e-29 133.3 116 62.9
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 4.5e-29 131.7 115 63.5
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 4.5e-29 131.7 115 63.5
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 4.5e-29 131.7 73 86.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 9.9e-29 130.6 128 60.9
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 1.3e-28 130.2 115 62.6
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.3e-28 130.2 115 61.7
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.7e-28 129.8 121 58.7
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.2e-28 129.4 121 57.9
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.2e-28 129.4 73 84.9
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 4.9e-28 128.3 108 63.9
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 8.4e-28 127.5 116 60.3
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 1.1e-27 127.1 111 62.2
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 1.1e-27 127.1 109 62.4
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 1.1e-27 127.1 108 62.0
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 1.4e-27 126.7 115 60.9
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 3.2e-27 125.6 115 58.3
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 3.2e-27 125.6 112 60.7
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 5.5e-27 124.8 126 55.6
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 7.1e-27 124.4 113 60.2
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 9.3e-27 124.0 113 59.3
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 9.3e-27 124.0 114 58.8
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 1.2e-26 123.6 120 59.2
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 1.2e-26 123.6 86 73.3
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 2.1e-26 122.9 113 60.2
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 2.7e-26 122.5 115 59.1
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 2.7e-26 122.5 73 79.5
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 2.7e-26 122.5 115 57.4
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 3.5e-26 122.1 114 59.6
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 3.5e-26 122.1 73 82.2
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 3.5e-26 122.1 113 59.3
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 3.5e-26 122.1 106 63.2
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 3.5e-26 122.1 106 63.2
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 4.6e-26 121.7 126 53.2
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 4.6e-26 121.7 90 68.9
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 4.6e-26 121.7 112 58.9
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 4.6e-26 121.7 86 70.9
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 7.9e-26 120.9 115 57.4
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 7.9e-26 120.9 115 57.4
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 1.0e-25 120.6 113 58.4
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.0e-25 120.6 114 60.5
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 1.8e-25 119.8 119 58.0
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 2.3e-25 119.4 108 60.2
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 3.0e-25 119.0 108 59.3
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 3.9e-25 118.6 113 55.8
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 3.9e-25 118.6 115 57.4
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.1e-25 118.2 119 57.1
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.1e-25 118.2 119 57.1
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 5.1e-25 118.2 119 57.1
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 5.1e-25 118.2 115 58.3
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 5.1e-25 118.2 106 60.4
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 6.7e-25 117.9 75 73.3
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 6.7e-25 117.9 113 55.8
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 6.7e-25 117.9 115 56.5
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 8.7e-25 117.5 113 54.9
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 8.7e-25 117.5 113 54.9
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 1.1e-24 117.1 125 53.6
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.1e-24 117.1 113 54.0
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 1.5e-24 116.7 106 63.2
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.5e-24 116.7 73 78.1
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 1.9e-24 116.3 111 60.4
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 1.9e-24 116.3 113 54.0
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.9e-24 116.3 113 54.0
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.9e-24 116.3 73 75.3
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 2.5e-24 115.9 106 63.2
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 2.5e-24 115.9 71 77.5
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 3.3e-24 115.5 113 55.8
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 3.3e-24 115.5 113 55.8
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 4.3e-24 115.2 113 54.0
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 4.3e-24 115.2 120 52.5
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 4.3e-24 115.2 115 57.4
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 5.6e-24 114.8 113 55.8
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 5.6e-24 114.8 113 54.0
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 5.6e-24 114.8 73 72.6
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 9.6e-24 114.0 113 54.0
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 9.6e-24 114.0 114 56.1
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 9.6e-24 114.0 117 53.0
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 9.6e-24 114.0 84 69.0
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 1.3e-23 113.6 113 53.1
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 1.3e-23 113.6 113 53.1
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 1.3e-23 113.6 113 53.1
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 1.3e-23 113.6 73 74.0
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.1e-23 112.8 73 75.3
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 2.8e-23 112.5 113 52.2
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 2.8e-23 112.5 106 56.6
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 2.8e-23 112.5 113 52.2
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 2.8e-23 112.5 113 52.2
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 2.8e-23 112.5 115 53.0
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 4.8e-23 111.7 115 53.9
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 6.2e-23 111.3 113 54.9
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 6.2e-23 111.3 121 51.2
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 6.2e-23 111.3 118 50.0
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 1.4e-22 110.2 73 74.0
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 5.3e-22 108.2 115 49.6
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 1.2e-21 107.1 72 70.8
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 1.2e-21 107.1 114 51.8
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 1.5e-21 106.7 95 56.8
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 4.5e-21 105.1 106 56.6
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 1.0e-20 104.0 64 76.6
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 2.2e-20 102.8 74 62.2
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 3.8e-20 102.1 87 60.9
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.4e-19 100.1 106 53.8
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 2.5e-19 99.4 89 61.8
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.2e-19 99.0 137 43.8
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.2e-19 99.0 137 43.8
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.7e-18 95.9 57 78.9
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 6.0e-18 94.7 56 78.6
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.8e-17 93.2 61 72.1
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 1.1e-16 90.5 95 54.7
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 1.8e-14 83.2 52 75.0
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 5.0e-12 75.1 80 53.8
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 1.4e-11 73.6 74 54.1
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 3.2e-11 72.4 79 49.4
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 3.2e-11 72.4 52 65.4
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 1.4e-09 67.0 71 53.5
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 2.3e-09 66.2 52 57.7
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 5.1e-09 65.1 71 45.1
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 1.1e-08 63.9 44 75.0
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 7.4e-08 61.2 38 71.1


User provided reference genes

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