Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 3.4e-53 211.8 117 100.0
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 3.4e-53 211.8 117 100.0
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 3.1e-46 188.7 115 91.3
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 5.9e-13 78.2 96 50.0
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 6.5e-12 74.7 116 45.7
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 1.1e-11 73.9 69 59.4
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 2.5e-11 72.8 63 58.7
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 3.2e-11 72.4 85 50.6
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 5.5e-11 71.6 136 41.2
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 9.4e-11 70.9 117 40.2
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 1.6e-10 70.1 70 51.4
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 2.1e-10 69.7 88 47.7
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 2.7e-10 69.3 70 54.3
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 2.7e-10 69.3 136 40.4
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 6.1e-10 68.2 65 55.4
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 8.0e-10 67.8 124 37.9
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 8.0e-10 67.8 115 40.0
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 1.0e-09 67.4 117 39.3
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 1.4e-09 67.0 117 42.7
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 1.8e-09 66.6 116 40.5
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 2.3e-09 66.2 68 54.4
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 2.3e-09 66.2 116 41.4
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 3.0e-09 65.9 113 38.1
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 3.0e-09 65.9 116 44.0
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 3.0e-09 65.9 66 56.1
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 4.0e-09 65.5 91 41.8
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 5.2e-09 65.1 115 39.1
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 6.7e-09 64.7 114 40.4
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 6.7e-09 64.7 89 41.6
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 1.2e-08 63.9 124 36.3
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 1.2e-08 63.9 63 57.1
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 1.5e-08 63.5 69 50.7
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 1.5e-08 63.5 147 35.4
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 2.0e-08 63.2 120 41.7
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 2.0e-08 63.2 125 37.6
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 2.0e-08 63.2 86 47.7
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.0e-08 63.2 64 57.8
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 2.0e-08 63.2 116 40.5
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 2.0e-08 63.2 118 39.0
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 2.6e-08 62.8 66 47.0
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 4.4e-08 62.0 123 35.8
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 4.4e-08 62.0 122 39.3
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 5.7e-08 61.6 106 39.6
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 7.5e-08 61.2 63 49.2
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 7.5e-08 61.2 95 40.0
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 7.5e-08 61.2 95 40.0
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 7.5e-08 61.2 126 39.7
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 9.7e-08 60.8 86 39.5
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 1.3e-07 60.5 70 51.4
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 1.3e-07 60.5 116 36.2
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.3e-07 60.5 75 50.7
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 1.3e-07 60.5 120 35.8
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 1.7e-07 60.1 120 40.8
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 1.7e-07 60.1 119 39.5
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 2.2e-07 59.7 117 39.3
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 2.2e-07 59.7 88 38.6
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 2.2e-07 59.7 66 43.9
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 2.2e-07 59.7 70 48.6
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.2e-07 59.7 148 34.5
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 2.2e-07 59.7 101 39.6
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 2.8e-07 59.3 118 41.5
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 2.8e-07 59.3 130 34.6
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 2.8e-07 59.3 99 38.4
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 3.7e-07 58.9 127 34.6
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 3.7e-07 58.9 95 43.2
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 4.8e-07 58.5 128 35.9
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 4.8e-07 58.5 90 45.6
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 6.3e-07 58.2 117 35.9
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 6.3e-07 58.2 117 36.8
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 8.2e-07 57.8 119 38.7
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 1.1e-06 57.4 120 39.2
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 1.1e-06 57.4 115 38.3
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 1.1e-06 57.4 77 40.3
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 1.1e-06 57.4 86 40.7
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 1.1e-06 57.4 107 40.2
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 1.1e-06 57.4 56 57.1
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 1.4e-06 57.0 105 40.0
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 1.4e-06 57.0 120 32.5
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 1.8e-06 56.6 71 43.7
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 1.8e-06 56.6 71 43.7
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 1.8e-06 56.6 71 43.7
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 1.8e-06 56.6 134 35.8
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 1.8e-06 56.6 56 55.4
Migut.E00592 Erythranthe guttata HOM05D007431 ORTHO05D008438 1.8e-06 56.6 66 42.4
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 1.8e-06 56.6 118 37.3
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 2.4e-06 56.2 116 36.2
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 2.4e-06 56.2 118 35.6
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 2.4e-06 56.2 55 56.4
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 2.4e-06 56.2 116 37.1
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 3.1e-06 55.8 116 32.8
Haze_02139 Corylus avellana HOM05D023024 ORTHO05D008438 3.1e-06 55.8 70 51.4
Nitab4.5_0004839g0050 Nicotiana tabacum HOM05D015294 ORTHO05D018867 5.3e-06 55.1 157 33.1
MBI15_g23251_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 7.0e-06 54.7 149 34.2
Haze_23978 Corylus avellana HOM05D023024 ORTHO05D008438 9.1e-06 54.3 133 40.6


User provided reference genes

Program Settings