Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011198 Daucus carota HOM05D005889 ORTHO05D007495 1.8e-85 319.3 175 100.0
SalBow1G5017 Salvia bowleyana HOM05D005889 ORTHO05D007495 1.4e-37 160.2 185 56.8
Hma1.2p1_0697F.1_g204970 Hydrangea macrophylla HOM05D005889 ORTHO05D007495 2.4e-37 159.5 189 58.2
Rhsim10G0026900 Rhododendron simsii HOM05D005889 ORTHO05D007495 2.4e-37 159.5 184 59.8
Rhsim10G0026400 Rhododendron simsii HOM05D005889 ORTHO05D007495 7.0e-37 157.9 183 60.7
QL02p077702 Quercus lobata HOM05D005889 ORTHO05D007495 3.5e-36 155.6 181 55.2
Actinidia06039 Actinidia chinensis HOM05D005889 ORTHO05D007495 4.6e-36 155.2 185 56.8
CSS0022009 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 5.9e-36 154.8 111 76.6
Aqoxy3G03079 Aquilegia oxysepala HOM05D005889 ORTHO05D007495 1.0e-35 154.1 160 59.4
CDE01G0491 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 1.0e-35 154.1 156 63.5
Nitab4.5_0001952g0130 Nicotiana tabacum HOM05D005889 ORTHO05D007495 3.9e-35 152.1 144 62.5
PGSC0003DMG400000508 Solanum tuberosum HOM05D005889 ORTHO05D007495 3.9e-35 152.1 189 55.0
Cc07_g02540 Coffea canephora HOM05D005889 ORTHO05D007495 5.0e-35 151.8 181 51.9
TAR371G1159 Trochodendron aralioides HOM05D005889 ORTHO05D007495 5.0e-35 151.8 181 58.0
CsaV3_3G042070 Cucumis sativus L. HOM05D005889 ORTHO05D007495 6.6e-35 151.4 185 56.2
Sed0001958 Sechium edule HOM05D005889 ORTHO05D007495 8.6e-35 151.0 182 54.9
Sopen02g031900 Solanum pennellii HOM05D005889 ORTHO05D007495 8.6e-35 151.0 189 54.5
Manes.17G118700 Manihot esculenta HOM05D005889 ORTHO05D007495 1.5e-34 150.2 192 54.7
Ciclev10012884m.g Citrus clementina HOM05D005889 ORTHO05D007495 2.5e-34 149.4 185 54.6
MBI14_g19739_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 2.5e-34 149.4 137 62.8
Solyc02g087150.3 Solanum lycopersicum HOM05D005889 ORTHO05D007495 2.5e-34 149.4 189 54.0
Oeu047335.1 Olea europaea HOM05D005889 ORTHO05D007495 3.3e-34 149.1 184 54.9
Sabra16G0230000 Salix brachista HOM05D005889 ORTHO05D007495 3.3e-34 149.1 179 56.4
Nn4g22882 Nelumbo nucifera HOM05D005889 ORTHO05D007495 5.6e-34 148.3 177 56.5
Potri.001G350500 Populus trichocarpa HOM05D005889 ORTHO05D007495 5.6e-34 148.3 188 53.2
Prupe.3G279900 Prunus persica HOM05D005889 ORTHO05D007495 5.6e-34 148.3 112 74.1
MELO3C009927.2 Cucumis melo HOM05D005889 ORTHO05D007495 7.3e-34 147.9 188 56.4
ECA238G1302 Erigeron canadensis HOM05D005889 ORTHO05D007495 9.5e-34 147.5 125 71.2
Lsat_1_v5_gn_2_92760 Lactuca sativa HOM05D005889 ORTHO05D007495 1.2e-33 147.1 139 66.2
Peaxi162Scf00129g00825 Petunia axillaris HOM05D005889 ORTHO05D007495 1.2e-33 147.1 140 62.1
Sed0023571 Sechium edule HOM05D005889 ORTHO05D007495 1.2e-33 147.1 173 53.2
TWI56G0856 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 3.6e-33 145.6 177 54.8
MSTRG.15501 Avicennia marina HOM05D005889 ORTHO05D007495 4.7e-33 145.2 131 67.2
CDE02G1560 Ceratophyllum demersum HOM05D005889 ORTHO05D007495 4.7e-33 145.2 158 61.4
Thecc.04G004200 Theobroma cacao HOM05D005889 ORTHO05D007495 6.2e-33 144.8 200 51.5
CiPaw.03G035200 Carya illinoinensis HOM05D005889 ORTHO05D007495 8.0e-33 144.4 95 83.2
Migut.K01361 Erythranthe guttata HOM05D005889 ORTHO05D007495 8.0e-33 144.4 134 65.7
THA.LOC104821069 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 8.0e-33 144.4 182 53.3
Manes.15G180360 Manihot esculenta HOM05D005889 ORTHO05D007495 1.0e-32 144.1 188 52.7
CAN.G206.53 Capsicum annuum HOM05D005889 ORTHO05D007495 1.4e-32 143.7 100 80.0
HanXRQChr14g0448791 Helianthus annuus HOM05D005889 ORTHO05D007495 1.8e-32 143.3 189 52.4
vmacro05795 Vaccinium macrocarpon HOM05D005889 ORTHO05D007495 2.3e-32 142.9 215 52.6
Cfa007463 Carpinus fangiana HOM05D001690 ORTHO05D002627 3.1e-32 142.5 94 81.9
PGR083G2278 Punica granatum HOM05D005889 ORTHO05D007495 4.0e-32 142.1 176 52.8
AUR62032095 Chenopodium quinoa HOM05D005889 ORTHO05D007495 5.2e-32 141.7 182 48.4
Sc20g0002790 Simmondsia chinensis HOM05D005889 ORTHO05D007495 5.2e-32 141.7 141 63.8
unitig_21.g20501 Utricularia gibba HOM05D005889 ORTHO05D007495 6.8e-32 141.4 118 66.9
Ah.16g106950 Amaranthus hybridus HOM05D005889 ORTHO05D007495 8.9e-32 141.0 182 50.5
MD17G1039100 Malus domestica HOM05D005889 ORTHO05D007495 8.9e-32 141.0 182 56.0
Duzib147G1282 Durio zibethinus HOM05D005889 ORTHO05D007495 1.2e-31 140.6 97 77.3
FvH4_6g50270 Fragaria vesca HOM05D005889 ORTHO05D007495 2.0e-31 139.8 177 52.5
FAN14G2248 Fragaria x ananassa HOM05D005889 ORTHO05D007495 2.0e-31 139.8 177 52.5
CARHR198430 Cardamine hirsuta HOM05D005889 ORTHO05D007495 2.6e-31 139.4 182 51.1
Gohir.D07G225400 Gossypium hirsutum HOM05D005889 ORTHO05D007495 3.4e-31 139.0 185 51.9
A02p02770 Brassica napus HOM05D005889 ORTHO05D007495 4.4e-31 138.7 179 49.2
Glyma.13G070100 Glycine max HOM05D005889 ORTHO05D007495 4.4e-31 138.7 131 62.6
SGA_v2.0_scaffold205G41723 Striga asiatica HOM05D005889 ORTHO05D007495 4.4e-31 138.7 127 64.6
Phvul.004G019800 Phaseolus vulgaris HOM05D005889 ORTHO05D007495 5.8e-31 138.3 185 51.4
Atru.chr8.2424 Acer truncatum HOM05D005889 ORTHO05D007495 7.5e-31 137.9 192 52.1
CANSAT64G0610 Cannabis sativa HOM05D005889 ORTHO05D007495 7.5e-31 137.9 181 50.8
Gorai.001G259800 Gossypium raimondii HOM05D005889 ORTHO05D007495 7.5e-31 137.9 185 51.4
FAN09G4317 Fragaria x ananassa HOM05D005889 ORTHO05D007495 1.3e-30 137.1 179 52.0
HanXRQChr12g0385561 Helianthus annuus HOM05D005889 ORTHO05D007495 1.3e-30 137.1 130 63.8
Hund20036 Selenicereus undatus HOM05D005889 ORTHO05D007495 1.3e-30 137.1 175 49.7
FAN05G0142 Fragaria x ananassa HOM05D005889 ORTHO05D007495 1.7e-30 136.7 179 52.0
Medtr6g007887 Medicago truncatula HOM05D005889 ORTHO05D007495 1.7e-30 136.7 186 48.9
COL.COLO4_32001 Corchorus olitorius HOM05D005889 ORTHO05D007495 2.2e-30 136.3 98 74.5
Eucgr.J02175 Eucalyptus grandis HOM05D005889 ORTHO05D007495 2.9e-30 136.0 95 75.8
Lj7C409T13 Lonicera japonica HOM05D005889 ORTHO05D007495 2.9e-30 136.0 132 64.4
RcHm_v2.0_Chr2g0170581 Rosa chinensis HOM05D005889 ORTHO05D007495 3.7e-30 135.6 148 57.4
AT5G14910 Arabidopsis thaliana HOM05D005889 ORTHO05D007495 6.4e-30 134.8 178 49.4
arahy.Tifrunner.gnm1.ann1.LQS8H1 Arachis hypogaea HOM05D005889 ORTHO05D007495 6.4e-30 134.8 185 50.8
BraA02t05248Z Brassica rapa HOM05D005889 ORTHO05D007495 6.4e-30 134.8 181 48.6
Carub.0006s1306 Capsella rubella HOM05D005889 ORTHO05D007495 6.4e-30 134.8 177 51.4
PSO063G7534 Papaver somniferum HOM05D005889 ORTHO05D007495 6.4e-30 134.8 116 66.4
PSO832G3377 Papaver somniferum HOM05D005889 ORTHO05D007495 6.4e-30 134.8 116 65.5
Thhalv10014795m.g Eutrema salsugineum HOM05D005889 ORTHO05D007495 8.3e-30 134.4 183 49.2
BraA03t10009Z Brassica rapa HOM05D005889 ORTHO05D007495 1.4e-29 133.7 93 75.3
CSS0028338 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 1.4e-29 133.7 113 68.1
Glyma.19G012900 Glycine max HOM05D005889 ORTHO05D007495 1.4e-29 133.7 127 61.4
BcaB01g05094 Brassica carinata HOM05D005889 ORTHO05D007495 1.9e-29 133.3 140 54.3
THA.LOC104822380 Tarenaya hassleriana HOM05D005889 ORTHO05D007495 1.9e-29 133.3 184 48.9
BcaNung05888 Brassica carinata HOM05D005889 ORTHO05D007495 2.4e-29 132.9 93 73.1
C02p07380 Brassica napus HOM05D005889 ORTHO05D007495 2.4e-29 132.9 93 73.1
BolC2t06669H Brassica oleracea HOM05D005889 ORTHO05D007495 2.4e-29 132.9 93 73.1
C03p07840 Brassica napus HOM05D005889 ORTHO05D007495 3.2e-29 132.5 139 55.4
CSS0046645 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 3.2e-29 132.5 185 50.8
BolC3t13283H Brassica oleracea HOM05D005889 ORTHO05D007495 4.1e-29 132.1 139 54.7
CANSAT64G2621 Cannabis sativa HOM05D005889 ORTHO05D007495 4.1e-29 132.1 181 49.2
TWI56G0985 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 4.1e-29 132.1 182 50.5
FAN02G1209 Fragaria x ananassa HOM05D005889 ORTHO05D007495 7.0e-29 131.3 179 51.4
A03p06840 Brassica napus HOM05D005889 ORTHO05D007495 9.2e-29 131.0 180 49.4
GSVIVG01032527001 Vitis vinifera HOM05D005889 ORTHO05D007495 9.2e-29 131.0 82 86.6
BcaNung03088 Brassica carinata HOM05D005889 ORTHO05D007495 1.2e-28 130.6 180 47.8
arahy.Tifrunner.gnm1.ann1.XH0R3V Arachis hypogaea HOM05D005889 ORTHO05D007495 1.6e-28 130.2 186 50.5
VMungo0464G2061 Vigna mungo HOM05D001690 ORTHO05D002627 2.7e-28 129.4 112 66.1
Lj2g0018244 Lotus japonicus HOM05D005889 ORTHO05D007495 3.5e-28 129.0 176 47.2
ClCG10G014500 Citrullus lanatus HOM05D005889 ORTHO05D007495 3.0e-27 125.9 181 46.4
TWI12G0403 Tripterygium wilfordii HOM05D005889 ORTHO05D007495 5.0e-27 125.2 116 62.1
Sp6g29140 Schrenkiella parvula HOM05D005889 ORTHO05D007495 1.5e-26 123.6 179 46.9
Psat1g080040 Pisum sativum HOM05D005889 ORTHO05D007495 5.6e-26 121.7 187 43.3
MBI14_g42400_MAGBIO Magnolia biondii HOM05D005889 ORTHO05D007495 7.3e-26 121.3 77 84.4
Ca_04220_v3 Cicer arietinum L. HOM05D005889 ORTHO05D007495 1.2e-25 120.6 192 43.8
Nitab4.5_0005206g0020 Nicotiana tabacum HOM05D005889 ORTHO05D007495 2.3e-24 116.3 178 48.9
Aa31LG11G14590 Aethionema arabicum HOM05D005889 ORTHO05D007495 8.9e-24 114.4 219 41.1
EL10Ac2g03378 Beta vulgaris HOM05D005889 ORTHO05D007495 8.9e-24 114.4 77 76.6
BcaB01g05020 Brassica carinata HOM05D005889 ORTHO05D007495 4.4e-23 112.1 79 72.2
ATR0787G083 Amborella trichopoda HOM05D005889 ORTHO05D007495 3.7e-22 109.0 73 78.1
Os05g0337400 Oryza sativa ssp. japonica HOM05D005889 ORTHO05D007495 1.2e-20 104.0 119 54.6
Peaxi162Scf00700g00623 Petunia axillaris HOM05D005889 ORTHO05D007495 3.5e-20 102.4 72 76.4
Pp3c10_16560 Physcomitrium patens HOM05D005889 ORTHO05D007495 1.0e-19 100.9 102 54.9
Zm00001eb286710 Zea mays HOM05D005889 ORTHO05D007495 2.3e-19 99.8 86 60.5
Lalb_Chr21g0319321 Lupinus albus HOM05D000340 ORTHO05D000821 1.1e-18 97.4 78 64.1
Pp3c2_14600 Physcomitrium patens HOM05D005889 ORTHO05D007495 1.9e-18 96.7 101 53.5
Rhsim10G0027100 Rhododendron simsii HOM05D005889 ORTHO05D007495 3.3e-18 95.9 58 87.9
Pp3c1_25290 Physcomitrium patens HOM05D005889 ORTHO05D007495 5.6e-18 95.1 98 55.1
Mapoly0034s0091 Marchantia polymorpha HOM05D005889 ORTHO05D007495 6.2e-17 91.7 102 52.0
CSS0042844 Camellia sinensis var. sinensis HOM05D005889 ORTHO05D007495 1.3e-14 84.0 63 77.8
RcHm_v2.0_Chr2g0170541 Rosa chinensis HOM05D005889 ORTHO05D007495 4.1e-13 79.0 59 76.3
SEGI_28638 Sequoiadendron giganteum HOM05D005889 ORTHO05D007495 1.2e-12 77.4 101 47.5
SMO119G0369 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 3.5e-12 75.9 117 35.0
AL6G25690 Arabidopsis lyrata HOM05D005889 ORTHO05D007495 3.9e-11 72.4 159 37.7
HPP92_014818 Vanilla planifolia HOM05D005889 ORTHO05D007495 1.1e-10 70.9 98 43.9
Gohir.A07G218300 Gossypium hirsutum HOM05D005889 ORTHO05D007495 1.6e-09 67.0 146 39.0
TPR.G132 Trifolium pratense HOM05D005889 ORTHO05D007495 2.8e-09 66.2 42 78.6
Dinv35030 Davidia involucrata HOM05D005889 ORTHO05D007495 4.7e-09 65.5 131 44.3
Nn3g16976 Nelumbo nucifera HOM05D005889 ORTHO05D007495 4.4e-07 58.9 53 60.4
SMO163G0046 Selaginella moellendorffii HOM05D003366 ORTHO05D004045 7.6e-07 58.2 116 31.0


User provided reference genes

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