Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 2.0e-129 465.7 220 100.0
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 2.7e-78 295.8 208 68.8
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 2.7e-78 295.8 209 69.9
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 7.9e-78 294.3 206 70.9
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 1.3e-77 293.5 216 68.1
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 5.1e-77 291.6 219 65.3
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 6.7e-77 291.2 219 65.3
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 6.7e-77 291.2 219 65.8
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.9e-76 289.7 210 67.1
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.9e-76 289.7 210 67.1
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 5.7e-76 288.1 207 66.7
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 5.7e-76 288.1 218 65.6
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 9.6e-76 287.3 206 69.4
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 2.1e-75 286.2 218 65.1
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 3.7e-75 285.4 220 65.5
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 6.3e-75 284.6 196 70.9
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 2.4e-74 282.7 196 70.4
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 3.1e-74 282.3 207 67.6
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 5.3e-74 281.6 207 68.1
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 1.2e-73 280.4 197 69.5
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 2.0e-73 279.6 213 64.8
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 1.0e-72 277.3 207 67.6
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 3.8e-72 275.4 211 64.0
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 1.1e-71 273.9 208 64.9
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 1.4e-71 273.5 207 65.2
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 2.5e-71 272.7 207 65.7
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 3.2e-71 272.3 212 63.2
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 3.2e-71 272.3 208 64.4
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 4.2e-71 271.9 211 63.5
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 4.2e-71 271.9 216 63.0
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 4.2e-71 271.9 211 64.9
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 5.5e-71 271.6 211 64.0
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 7.2e-71 271.2 217 61.3
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 9.3e-71 270.8 219 61.6
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 9.3e-71 270.8 209 65.1
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 1.2e-70 270.4 210 64.8
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 1.2e-70 270.4 184 70.1
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 1.2e-70 270.4 209 62.7
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 2.7e-70 269.2 217 59.9
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 4.6e-70 268.5 210 63.3
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 6.1e-70 268.1 212 64.2
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 6.1e-70 268.1 210 63.3
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 7.9e-70 267.7 209 63.6
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 1.0e-69 267.3 215 61.9
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 2.3e-69 266.2 216 61.1
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 3.0e-69 265.8 216 63.4
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 3.0e-69 265.8 208 61.5
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 3.0e-69 265.8 208 61.5
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 3.9e-69 265.4 215 61.9
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 1.5e-68 263.5 183 67.2
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 1.9e-68 263.1 216 60.2
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 3.3e-68 262.3 217 63.6
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 4.3e-68 261.9 199 64.8
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 4.3e-68 261.9 208 60.6
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 4.3e-68 261.9 183 67.8
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 9.7e-68 260.8 209 62.7
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 9.7e-68 260.8 206 62.6
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 1.6e-67 260.0 207 61.4
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.2e-67 259.6 217 60.8
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.8e-67 259.2 215 60.5
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 2.8e-67 259.2 215 60.5
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 3.7e-67 258.8 212 61.3
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 3.7e-67 258.8 197 65.0
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 4.8e-67 258.5 213 61.0
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 6.3e-67 258.1 207 62.3
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 8.2e-67 257.7 203 63.1
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 1.8e-66 256.5 199 62.8
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 1.8e-66 256.5 199 62.8
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 4.1e-66 255.4 210 61.9
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 5.3e-66 255.0 182 65.9
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 5.3e-66 255.0 209 61.7
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.2e-65 253.8 208 60.1
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.2e-65 253.8 208 60.1
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 1.5e-65 253.4 194 62.4
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 1.5e-65 253.4 209 60.8
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 1.5e-65 253.4 182 65.9
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 1.5e-65 253.4 203 61.1
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 1.5e-65 253.4 207 60.9
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 2.6e-65 252.7 198 64.1
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.6e-65 252.7 198 64.1
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.6e-65 252.7 198 64.1
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 3.4e-65 252.3 208 61.1
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 5.9e-65 251.5 206 59.7
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 5.9e-65 251.5 215 56.7
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 7.7e-65 251.1 183 64.5
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 1.0e-64 250.8 204 59.8
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 2.9e-64 249.2 206 59.2
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 3.8e-64 248.8 209 59.3
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 6.5e-64 248.1 183 63.9
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 6.5e-64 248.1 215 56.7
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 6.5e-64 248.1 215 60.5
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.1e-63 247.3 212 59.4
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 1.1e-63 247.3 215 58.1
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 3.2e-63 245.7 182 63.7
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 3.2e-63 245.7 160 71.9
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 4.6e-62 241.9 217 57.1
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 4.6e-62 241.9 160 70.6
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 1.4e-61 240.4 182 61.5
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 2.3e-61 239.6 184 61.4
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 3.0e-61 239.2 213 57.3
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 1.5e-60 236.9 207 58.0
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 3.3e-60 235.7 219 53.4
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 1.7e-59 233.4 209 56.5
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 2.8e-59 232.6 184 61.4
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 2.8e-59 232.6 208 56.7
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 8.2e-59 231.1 184 61.4
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 8.5e-56 221.1 182 57.7
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 7.2e-55 218.0 126 76.2
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 2.7e-54 216.1 182 57.1
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 7.9e-54 214.5 182 57.1
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 1.0e-53 214.2 208 51.4
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 1.8e-53 213.4 182 56.6
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 6.7e-53 211.5 182 56.0
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 6.7e-53 211.5 182 56.0
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 2.0e-52 209.9 320 41.6
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 3.3e-52 209.1 182 56.0
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 3.7e-51 205.7 204 52.9
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 1.3e-48 197.2 178 59.0
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 8.5e-48 194.5 182 53.3
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 3.2e-47 192.6 217 44.7
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 6.1e-46 188.3 173 59.5
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 4.0e-45 185.7 204 48.0
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 1.7e-40 170.2 170 55.3
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 1.7e-40 170.2 154 57.8
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 1.2e-38 164.1 210 43.3
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 3.5e-33 146.0 224 38.8
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 1.3e-32 144.1 184 46.2
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.7e-32 143.7 185 44.3
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 6.1e-30 135.2 171 43.3
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 8.0e-30 134.8 75 78.7
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 1.8e-29 133.7 201 36.8
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 5.7e-28 128.6 195 39.0
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 4.1e-26 122.5 206 32.0
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 5.4e-26 122.1 183 38.8
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 3.2e-18 96.3 61 63.9
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 1.1e-15 87.8 184 31.5
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 8.0e-14 81.6 62 59.7
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 3.5e-09 66.2 69 49.3
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 1.1e-07 61.2 119 34.5
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 9.5e-07 58.2 66 50.0


User provided reference genes

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