Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 3.8e-100 368.2 192 100.0
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 4.2e-19 99.0 173 43.4
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.6e-18 97.1 173 43.4
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.5e-16 90.5 171 43.9
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 2.0e-16 90.1 163 44.8
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 2.6e-16 89.7 176 42.6
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 3.4e-16 89.4 157 47.1
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 3.4e-16 89.4 163 44.2
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 4.4e-16 89.0 172 40.7
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 7.5e-16 88.2 166 42.2
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 1.3e-15 87.4 173 41.0
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.7e-15 87.0 164 40.9
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 9.2e-14 81.3 161 39.1
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 1.2e-13 80.9 169 39.6
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 1.2e-13 80.9 174 40.8
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 5.9e-13 78.6 152 37.5
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 5.9e-13 78.6 164 41.5
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 2.3e-12 76.6 176 37.5
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 2.3e-12 76.6 164 39.0
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 5.0e-12 75.5 159 40.3
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 6.6e-12 75.1 178 39.3
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 1.1e-11 74.3 174 36.2
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 3.3e-11 72.8 167 37.7
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 5.6e-11 72.0 166 36.1
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 9.5e-11 71.2 174 37.9
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 9.5e-11 71.2 167 34.7
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 2.1e-10 70.1 176 33.5
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 8.0e-10 68.2 156 35.3
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 1.0e-09 67.8 158 34.8
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 1.0e-09 67.8 165 35.8
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 1.8e-09 67.0 169 35.5
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 1.8e-09 67.0 167 33.5
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 2.3e-09 66.6 154 38.3
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 5.2e-09 65.5 159 39.6
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 6.8e-09 65.1 165 37.6
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 8.9e-09 64.7 154 36.4
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 8.9e-09 64.7 167 36.5
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 2.0e-08 63.5 159 39.0
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-08 63.5 159 39.0
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.0e-08 63.5 159 39.0
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.6e-08 63.2 159 39.0
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 4.4e-08 62.4 170 32.9
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 5.8e-08 62.0 161 37.3
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 5.8e-08 62.0 182 32.4
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 7.5e-08 61.6 163 35.0
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 9.8e-08 61.2 158 29.7
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 9.8e-08 61.2 158 29.7
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 2.2e-07 60.1 56 51.8
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 3.7e-07 59.3 167 32.9
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 4.9e-07 58.9 166 31.9
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 1.1e-06 57.8 188 34.6
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 1.9e-06 57.0 197 31.0
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 2.4e-06 56.6 188 31.4
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 2.4e-06 56.6 172 32.0
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 2.4e-06 56.6 167 31.1
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 3.2e-06 56.2 162 36.4
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 9.2e-06 54.7 181 30.4


User provided reference genes

Program Settings