Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 1.8e-240 835.5 417 100.0
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 2.5e-165 585.9 405 71.9
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 3.2e-165 585.5 405 71.9
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.0e-163 580.5 404 70.3
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 1.4e-163 580.1 405 71.1
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 1.8e-163 579.7 402 71.1
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 5.7e-162 574.7 401 70.8
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 6.3e-161 571.2 397 71.3
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.8e-160 569.7 401 72.1
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 2.0e-159 566.2 405 70.4
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 1.3e-158 563.5 353 77.6
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.3e-158 563.5 377 73.5
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 2.9e-158 562.4 408 69.4
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 9.5e-157 557.4 409 68.5
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 3.6e-156 555.4 404 68.1
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 3.0e-155 552.4 412 68.9
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 6.8e-155 551.2 405 69.6
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.6e-154 549.3 412 68.4
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 5.7e-154 548.1 399 69.9
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.7e-153 546.6 353 75.4
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 4.9e-153 545.0 436 64.9
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 4.9e-153 545.0 344 76.7
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 6.4e-153 544.7 405 66.7
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 8.3e-153 544.3 395 68.4
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 1.4e-152 543.5 408 66.7
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 4.1e-152 542.0 404 67.3
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 4.1e-152 542.0 345 74.8
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 7.8e-151 537.7 398 67.1
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 1.7e-150 536.6 405 66.9
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 3.0e-150 535.8 404 65.6
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 2.8e-148 529.3 379 67.3
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 2.8e-148 529.3 391 66.5
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 4.7e-148 528.5 368 68.8
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 1.0e-147 527.3 345 73.3
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 3.1e-147 525.8 403 65.5
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 3.1e-147 525.8 368 68.2
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 1.5e-146 523.5 353 72.2
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 2.6e-146 522.7 353 72.2
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 2.6e-146 522.7 386 67.4
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 4.4e-146 521.9 405 65.4
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 4.4e-146 521.9 387 65.9
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 7.5e-146 521.2 406 64.8
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 9.8e-146 520.8 421 65.6
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 4.1e-144 515.4 406 65.8
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 3.5e-143 512.3 387 65.4
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 4.6e-143 511.9 344 70.3
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 6.0e-143 511.5 405 63.0
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 6.0e-143 511.5 371 67.7
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 1.0e-142 510.8 406 62.8
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 2.3e-142 509.6 417 63.1
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 6.6e-142 508.1 415 63.6
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 1.5e-141 506.9 344 73.0
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 9.5e-141 504.2 404 63.9
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.6e-140 503.4 407 64.4
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 6.2e-140 501.5 414 61.6
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.1e-139 500.7 396 61.9
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.5e-138 494.6 408 63.0
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 4.9e-137 491.9 353 66.9
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 1.1e-136 490.7 349 69.1
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.1e-136 488.8 408 62.5
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 5.4e-136 488.4 353 66.0
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 9.2e-136 487.6 377 63.7
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 1.6e-135 486.9 353 67.1
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 6.0e-135 485.0 408 61.5
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 1.0e-134 484.2 340 69.7
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 1.7e-134 483.4 377 63.4
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 3.0e-134 482.6 377 63.9
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 6.6e-134 481.5 353 67.7
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 6.6e-134 481.5 408 61.5
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 4.3e-133 478.8 355 66.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.6e-132 476.9 368 65.8
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 3.6e-132 475.7 376 62.8
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 1.8e-131 473.4 372 65.6
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 9.9e-130 467.6 404 60.9
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 1.3e-129 467.2 376 62.2
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 1.7e-129 466.8 344 65.7
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 2.9e-129 466.1 355 62.0
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 6.4e-129 464.9 344 65.4
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 1.4e-128 463.8 374 62.6
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 1.4e-128 463.8 397 59.9
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 5.4e-128 461.8 399 59.9
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 2.1e-127 459.9 397 60.2
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 6.0e-127 458.4 485 51.8
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 1.7e-126 456.8 353 64.9
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 3.3e-125 452.6 372 62.4
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 3.6e-124 449.1 383 58.5
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.0e-122 443.4 320 70.6
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 8.4e-121 438.0 357 61.6
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.2e-120 436.0 408 57.4
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.7e-119 433.0 274 77.4
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 3.5e-119 432.6 274 77.0
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 4.2e-112 409.1 306 68.0
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 2.8e-108 396.4 350 54.3
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 2.4e-107 393.3 269 73.2
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 6.9e-107 391.7 352 55.4
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 9.3e-104 381.3 353 57.2
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 1.3e-102 377.5 404 54.5
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.1e-101 374.4 345 52.8
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 1.6e-100 370.5 284 66.9
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 1.5e-93 347.4 267 65.2
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 4.5e-90 335.9 367 45.8
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.1e-79 300.4 251 62.5
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 1.1e-69 268.1 343 42.0
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 3.6e-63 246.5 167 72.5
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 5.0e-57 226.1 168 66.7
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 1.1e-51 208.4 263 46.8
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 5.5e-48 196.1 194 50.0
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 1.4e-46 191.4 228 49.6
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 2.8e-44 183.7 117 73.5
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.8e-43 181.0 108 75.0
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 5.4e-43 179.5 155 58.7
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 3.5e-42 176.8 117 70.1
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 5.9e-42 176.0 121 71.1
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 1.2e-39 168.3 138 58.0
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 2.0e-37 161.0 326 38.7
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 3.4e-37 160.2 141 56.7
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.3e-33 148.3 134 56.0
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 6.2e-31 139.4 136 52.2
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 2.4e-27 127.5 189 40.7
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.8e-22 111.3 223 37.2
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 9.2e-19 99.0 61 73.8
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 7.3e-16 89.4 53 71.7
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 6.4e-12 76.3 57 56.1
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 3.2e-11 73.9 57 54.4
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 2.1e-10 71.2 85 45.9
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 2.7e-10 70.9 58 53.4
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 7.8e-10 69.3 56 53.6
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 7.8e-10 69.3 56 53.6
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.3e-09 68.6 412 24.3
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.2e-07 62.0 49 63.3


User provided reference genes

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