Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 2.6e-216 755.4 406 100.0
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.8e-76 290.8 370 53.5
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 9.8e-75 285.0 411 47.2
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 4.1e-65 253.1 387 48.8
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 2.5e-62 243.8 438 42.9
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 2.6e-59 233.8 401 44.1
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 3.4e-59 233.4 386 43.3
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 7.5e-59 232.3 434 42.6
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 8.3e-58 228.8 385 44.7
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 1.1e-57 228.4 396 44.2
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 1.4e-57 228.0 373 48.0
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 7.0e-57 225.7 440 41.1
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 2.7e-56 223.8 419 42.2
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 6.0e-56 222.6 389 45.0
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 1.0e-55 221.9 422 40.0
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 1.3e-55 221.5 441 40.8
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 6.6e-55 219.2 452 40.9
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 1.5e-54 218.0 425 41.4
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 1.9e-54 217.6 385 43.9
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 1.9e-54 217.6 442 41.0
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 5.6e-54 216.1 425 39.1
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 4.7e-53 213.0 398 45.0
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 4.7e-53 213.0 357 44.0
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 8.9e-52 208.8 416 39.4
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 2.0e-51 207.6 354 43.5
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 6.4e-50 202.6 433 39.5
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 2.4e-49 200.7 415 36.9
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 9.2e-49 198.7 366 42.6
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 2.1e-48 197.6 414 39.6
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.7e-48 197.2 375 41.9
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 3.5e-48 196.8 368 42.9
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 7.8e-48 195.7 314 44.6
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 1.3e-47 194.9 390 40.8
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 1.1e-46 191.8 406 38.7
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 1.5e-46 191.4 395 40.8
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 2.8e-45 187.2 409 38.1
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 8.1e-45 185.7 412 38.1
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 1.4e-44 184.9 433 37.2
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 4.0e-44 183.3 302 42.7
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 5.2e-44 183.0 298 47.0
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 1.2e-43 181.8 408 37.7
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 1.5e-43 181.4 421 39.7
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 4.4e-43 179.9 379 41.4
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 2.9e-42 177.2 386 40.9
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 8.3e-42 175.6 429 37.5
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.1e-41 175.3 270 45.6
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.1e-41 175.3 270 45.6
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 1.9e-41 174.5 425 37.4
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 2.4e-41 174.1 375 40.3
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 9.2e-41 172.2 418 36.4
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.6e-40 171.4 425 40.7
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 2.7e-40 170.6 393 37.7
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 2.7e-40 170.6 362 39.2
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 6.0e-40 169.5 403 37.5
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 6.0e-40 169.5 412 39.3
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 2.3e-39 167.5 405 39.0
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 3.9e-39 166.8 421 36.8
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 5.1e-39 166.4 395 37.7
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 3.3e-38 163.7 374 40.1
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 1.6e-37 161.4 438 36.3
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 2.1e-37 161.0 380 39.5
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 6.2e-37 159.5 378 41.8
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 8.1e-37 159.1 335 40.6
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 1.4e-36 158.3 389 36.8
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 1.8e-36 157.9 365 39.7
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 8.9e-36 155.6 372 38.7
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 1.2e-35 155.2 433 36.0
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 2.6e-35 154.1 433 34.4
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 7.6e-35 152.5 188 49.5
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 2.2e-34 151.0 392 37.0
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 2.9e-34 150.6 400 33.0
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 2.9e-34 150.6 402 33.3
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 2.9e-34 150.6 411 37.5
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 3.2e-33 147.1 404 34.7
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 1.6e-32 144.8 399 34.3
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 1.6e-32 144.8 315 39.0
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.6e-32 144.8 305 38.0
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 7.8e-32 142.5 324 36.4
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 2.3e-31 141.0 434 33.4
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 1.1e-30 138.7 354 34.7
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 2.5e-30 137.5 332 35.8
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 5.6e-30 136.3 386 36.3
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 5.6e-30 136.3 201 47.8
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 5.3e-28 129.8 491 30.5
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 9.9e-27 125.6 250 38.8
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 1.7e-26 124.8 431 32.9
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 9.3e-25 119.0 406 31.5
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 9.3e-25 119.0 406 31.5
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 1.6e-24 118.2 494 29.8
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 2.7e-24 117.5 346 34.4
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 1.3e-23 115.2 392 32.4
Lj4P116T76 Lonicera japonica HOM05D005710 ORTHO05D004657 2.1e-21 107.8 157 47.8
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 3.6e-21 107.1 319 31.0
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 1.1e-20 105.5 407 31.7
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 1.1e-20 105.5 407 31.7
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 1.1e-20 105.5 412 29.6
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 2.4e-20 104.4 415 29.4
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 4.0e-20 103.6 462 28.6
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 4.0e-20 103.6 462 28.6
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 6.9e-20 102.8 444 28.8
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 1.2e-19 102.1 505 28.3
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 1.5e-19 101.7 414 29.5
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 1.5e-19 101.7 353 31.7
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 9.9e-19 99.0 453 28.9
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 6.4e-18 96.3 131 42.7
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 8.4e-18 95.9 398 30.4
Nn4g23370 Nelumbo nucifera HOM05D005710 ORTHO05D004657 2.4e-17 94.4 269 32.7
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 2.7e-16 90.9 102 48.0
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 1.0e-15 89.0 406 28.1
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 8.7e-15 85.9 499 27.1
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 1.1e-14 85.5 181 35.4
Ca_06819_v3 Cicer arietinum L. HOM05D005710 ORTHO05D004657 9.6e-14 82.4 270 32.6
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 1.6e-13 81.6 255 32.5
Oeu033388.1 Olea europaea HOM05D005710 ORTHO05D004657 1.6e-13 81.6 174 36.8
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 6.9e-12 76.3 270 30.7
SalBow2G0426 Salvia bowleyana HOM05D005710 ORTHO05D004657 4.9e-10 70.1 154 39.6
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 8.4e-10 69.3 221 30.8
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 2.5e-09 67.8 66 47.0
SEGI_24397 Sequoiadendron giganteum HOM05D005186 ORTHO05D006278 7.1e-09 66.2 115 37.4
SalBow3G1747 Salvia bowleyana HOM05D005710 ORTHO05D004657 9.3e-09 65.9 198 32.3
TAR371G0637 Trochodendron aralioides HOM05D005710 ORTHO05D004657 9.3e-09 65.9 153 42.5
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 5.1e-07 60.1 187 32.6
CAN.G206.216 Capsicum annuum HOM05D005710 ORTHO05D004657 8.7e-07 59.3 194 29.9
Lalb_Chr19g0140361 Lupinus albus HOM05D005186 ORTHO05D006278 1.9e-06 58.2 113 37.2
Migut.F01178 Erythranthe guttata HOM05D005186 ORTHO05D006278 7.4e-06 56.2 125 34.4
FAN01G3063 Fragaria x ananassa HOM05D005186 ORTHO05D006278 7.4e-06 56.2 99 37.4
FAN02G2871 Fragaria x ananassa HOM05D005710 ORTHO05D004657 7.4e-06 56.2 147 37.4
Glyma.09G231200 Glycine max HOM05D005186 ORTHO05D006278 7.4e-06 56.2 99 37.4


User provided reference genes

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